RNA–Protein interactions for RNA: ENST00000397968.3

CDH7-202, Transcript of cadherin 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH7, Length 12,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH7-202ENST00000397968 CDCA8Q53HL2 280 aa13.08□□□□□ -0.32
CDH7-202ENST00000397968 CHMP4BQ9H444 224 aaKnown RBP13.05□□□□□ -0.32
CDH7-202ENST00000397968 MIER1Q8N108 512 aa13.05□□□□□ -0.32
CDH7-202ENST00000397968 CASC1Q6TDU7 716 aa13.04□□□□□ -0.32
CDH7-202ENST00000397968 CDK11BP21127 795 aaKnown RBP13.04□□□□□ -0.32
CDH7-202ENST00000397968 STAG3Q9UJ98 1225 aa13.03□□□□□ -0.32
CDH7-202ENST00000397968 TIMELESSQ9UNS1 1208 aa13.01□□□□□ -0.33
CDH7-202ENST00000397968 CEP162Q5TB80 1403 aa13.01□□□□□ -0.33
CDH7-202ENST00000397968 CEP164Q9UPV0 1460 aa13□□□□□ -0.33
CDH7-202ENST00000397968 CFAP44Q96MT7 982 aa12.98□□□□□ -0.33
CDH7-202ENST00000397968 NPM1P06748 294 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDH7-202ENST00000397968 MS4A1P11836 297 aa12.97□□□□□ -0.33
CDH7-202ENST00000397968 ZRSR1Q15695 479 aaKnown RBP12.97□□□□□ -0.33
CDH7-202ENST00000397968 RB1CC1Q8TDY2 1594 aa12.97□□□□□ -0.33
CDH7-202ENST00000397968 CFAP53Q96M91 514 aa12.96□□□□□ -0.33
CDH7-202ENST00000397968 PPP4R2Q9NY27 417 aa12.96□□□□□ -0.33
CDH7-202ENST00000397968 TNIKQ9UKE5 1360 aa12.95□□□□□ -0.34
CDH7-202ENST00000397968 SALL2Q9Y467 1007 aaPredicted RBP12.94□□□□□ -0.34
CDH7-202ENST00000397968 CHGAP10645 457 aaKnown RBP12.93□□□□□ -0.34
CDH7-202ENST00000397968 KNSTRNQ9Y448 316 aa12.92□□□□□ -0.34
CDH7-202ENST00000397968 GOLGA6L6A8MZA4 724 aa12.92□□□□□ -0.34
CDH7-202ENST00000397968 NOP58Q9Y2X3 529 aaKnown RBP12.92□□□□□ -0.34
CDH7-202ENST00000397968 ARID3CA6NKF2 412 aa12.91□□□□□ -0.34
CDH7-202ENST00000397968 FHAD1B1AJZ9 1412 aa12.9□□□□□ -0.34
CDH7-202ENST00000397968 CHIC2Q9UKJ5 165 aa12.9□□□□□ -0.34
CDH7-202ENST00000397968 PTMSP20962 102 aa12.89□□□□□ -0.35
CDH7-202ENST00000397968 NRDCO43847 1150 aa12.89□□□□□ -0.35
CDH7-202ENST00000397968 NACADO15069 1562 aa12.88□□□□□ -0.35
CDH7-202ENST00000397968 DNTTIP2Q5QJE6 756 aaKnown RBP12.88□□□□□ -0.35
CDH7-202ENST00000397968 PNNQ9H307 717 aaKnown RBP12.88□□□□□ -0.35
CDH7-202ENST00000397968 PTMAP06454 111 aaKnown RBP12.88□□□□□ -0.35
CDH7-202ENST00000397968 FTSJ3Q8IY81 847 aaKnown RBP12.88□□□□□ -0.35
CDH7-202ENST00000397968 ARXQ96QS3 562 aa12.88□□□□□ -0.35
CDH7-202ENST00000397968 KIF27Q86VH2 1401 aa12.88□□□□□ -0.35
CDH7-202ENST00000397968 CCER2I3L3R5 266 aa12.87□□□□□ -0.35
CDH7-202ENST00000397968 L1TD1Q5T7N2 865 aaKnown RBP12.87□□□□□ -0.35
CDH7-202ENST00000397968 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
CDH7-202ENST00000397968 ARID4BQ4LE39 1312 aaPredicted RBP12.85□□□□□ -0.35
CDH7-202ENST00000397968 SUPT16HQ9Y5B9 1047 aaKnown RBP12.85□□□□□ -0.35
CDH7-202ENST00000397968 CHAF1AQ13111 956 aaPredicted RBP12.85□□□□□ -0.35
CDH7-202ENST00000397968 KDM2AQ9Y2K7 1162 aa12.84□□□□□ -0.35
CDH7-202ENST00000397968 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
CDH7-202ENST00000397968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDH7-202ENST00000397968 NUDCQ9Y266 331 aa12.83□□□□□ -0.36
CDH7-202ENST00000397968 BAZ1AQ9NRL2 1556 aaPredicted RBP12.81□□□□□ -0.36
CDH7-202ENST00000397968 IRX6P78412 446 aaPredicted RBP12.81□□□□□ -0.36
CDH7-202ENST00000397968 CARD11Q9BXL7 1154 aa12.81□□□□□ -0.36
CDH7-202ENST00000397968 MAPK8IP3Q9UPT6 1336 aa12.8□□□□□ -0.36
CDH7-202ENST00000397968 MYO15BQ96JP2 1530 aa12.8□□□□□ -0.36
CDH7-202ENST00000397968 PLEKHD1A6NEE1 506 aa12.79□□□□□ -0.36
CDH7-202ENST00000397968 MSNP26038 577 aaKnown RBP12.79□□□□□ -0.36
CDH7-202ENST00000397968 NAP1L5Q96NT1 182 aaPredicted RBP12.78□□□□□ -0.36
CDH7-202ENST00000397968 CHMP7Q8WUX9 453 aaPredicted RBP12.78□□□□□ -0.36
CDH7-202ENST00000397968 CCNB3Q8WWL7 1395 aa12.78□□□□□ -0.36
CDH7-202ENST00000397968 BAZ1BQ9UIG0 1483 aaKnown RBP12.77□□□□□ -0.37
CDH7-202ENST00000397968 HSCBQ8IWL3 235 aa12.75□□□□□ -0.37
CDH7-202ENST00000397968 RRP7BPQ9NSQ0 103 aa12.75□□□□□ -0.37
CDH7-202ENST00000397968 HSP90AB1P08238 724 aaKnown RBP12.74□□□□□ -0.37
CDH7-202ENST00000397968 CFDP1Q9UEE9 299 aaPredicted RBP12.74□□□□□ -0.37
CDH7-202ENST00000397968 MCCP23508 829 aa12.74□□□□□ -0.37
CDH7-202ENST00000397968 TMF1P82094 1093 aa12.7□□□□□ -0.38
CDH7-202ENST00000397968 HIRIP3Q9BW71 556 aaPredicted RBP12.7□□□□□ -0.38
CDH7-202ENST00000397968 PPP1R15AO75807 674 aaPredicted RBP12.7□□□□□ -0.38
CDH7-202ENST00000397968 USP35Q9P2H5 1018 aa12.68□□□□□ -0.38
CDH7-202ENST00000397968 ARHGAP35Q9NRY4 1499 aa12.68□□□□□ -0.38
CDH7-202ENST00000397968 GBP4Q96PP9 640 aa12.68□□□□□ -0.38
CDH7-202ENST00000397968 TCERG1O14776 1098 aaKnown RBP12.68□□□□□ -0.38
CDH7-202ENST00000397968 SETD5Q9C0A6 1442 aa12.67□□□□□ -0.38
CDH7-202ENST00000397968 GOLGA6L4A6NEF3 574 aa12.67□□□□□ -0.38
CDH7-202ENST00000397968 SYAP1Q96A49 352 aaPredicted RBP12.67□□□□□ -0.38
CDH7-202ENST00000397968 RBM19Q9Y4C8 960 aaKnown RBP12.67□□□□□ -0.38
CDH7-202ENST00000397968 VPS8Q8N3P4 1428 aa12.67□□□□□ -0.38
CDH7-202ENST00000397968 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
CDH7-202ENST00000397968 RGS3P49796 1198 aa12.65□□□□□ -0.38
CDH7-202ENST00000397968 KANK1Q14678 1352 aa12.65□□□□□ -0.38
CDH7-202ENST00000397968 IPO8O15397 1037 aaKnown RBP12.64□□□□□ -0.39
CDH7-202ENST00000397968 CALD1Q05682 793 aaKnown RBP12.64□□□□□ -0.39
CDH7-202ENST00000397968 KTN1Q86UP2 1357 aaKnown RBP12.64□□□□□ -0.39
CDH7-202ENST00000397968 LAS1LQ9Y4W2 734 aaKnown RBP12.64□□□□□ -0.39
CDH7-202ENST00000397968 RALBP1Q15311 655 aa12.64□□□□□ -0.39
CDH7-202ENST00000397968 PHLDB1Q86UU1 1377 aa12.64□□□□□ -0.39
CDH7-202ENST00000397968 HTATSF1O43719 755 aaKnown RBP12.63□□□□□ -0.39
CDH7-202ENST00000397968 DEKP35659 375 aaKnown RBP12.63□□□□□ -0.39
CDH7-202ENST00000397968 FRAT1Q92837 279 aaPredicted RBP12.63□□□□□ -0.39
CDH7-202ENST00000397968 KIAA2012Q0VF49 1180 aa12.62□□□□□ -0.39
CDH7-202ENST00000397968 ROCK2O75116 1388 aaKnown RBP12.62□□□□□ -0.39
CDH7-202ENST00000397968 PLCB2Q00722 1185 aa12.61□□□□□ -0.39
CDH7-202ENST00000397968 FGD1P98174 961 aa12.61□□□□□ -0.39
CDH7-202ENST00000397968 RGL3Q3MIN7 710 aa12.61□□□□□ -0.39
CDH7-202ENST00000397968 B4GALNT3Q6L9W6 998 aa12.6□□□□□ -0.39
CDH7-202ENST00000397968 KCNJ4P48050 445 aa12.6□□□□□ -0.39
CDH7-202ENST00000397968 HDGFP51858 240 aaKnown RBP12.59□□□□□ -0.39
CDH7-202ENST00000397968 EIF3AQ14152 1382 aaKnown RBP12.59□□□□□ -0.39
CDH7-202ENST00000397968 PMFBP1Q8TBY8 1022 aa12.59□□□□□ -0.39
CDH7-202ENST00000397968 RWDD1Q9H446 243 aaPredicted RBP12.58□□□□□ -0.4
CDH7-202ENST00000397968 FMN1Q68DA7 1419 aa12.58□□□□□ -0.4
CDH7-202ENST00000397968 CSPP1Q1MSJ5 1256 aa12.57□□□□□ -0.4
CDH7-202ENST00000397968 OS9Q13438 667 aaPredicted RBP12.57□□□□□ -0.4
CDH7-202ENST00000397968 IPO9Q96P70 1041 aaKnown RBP12.57□□□□□ -0.4
CDH7-202ENST00000397968 PDE3BQ13370 1112 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms