RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
FGFR1-208ENST00000397108 RUSC2Q8N2Y8 1516 aa18.19■□□□□ 0.5
FGFR1-208ENST00000397108 NUP160Q12769 1436 aa18.18■□□□□ 0.5
FGFR1-208ENST00000397108 CEP170Q5SW79 1584 aa18.18■□□□□ 0.5
FGFR1-208ENST00000397108 RIMBP3CA6NJZ7 1639 aa18.14■□□□□ 0.49
FGFR1-208ENST00000397108 RIMBP3BA6NNM3 1639 aa18.14■□□□□ 0.49
FGFR1-208ENST00000397108 RIMBP3Q9UFD9 1639 aa18.14■□□□□ 0.49
FGFR1-208ENST00000397108 CARMIL1Q5VZK9 1371 aa18.14■□□□□ 0.49
FGFR1-208ENST00000397108 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
FGFR1-208ENST00000397108 EHMT2Q96KQ7 1210 aa18.09■□□□□ 0.49
FGFR1-208ENST00000397108 SHROOM2Q13796 1616 aa18.07■□□□□ 0.48
FGFR1-208ENST00000397108 EEA1Q15075 1411 aa18.07■□□□□ 0.48
FGFR1-208ENST00000397108 RAPGEF2Q9Y4G8 1499 aa18.06■□□□□ 0.48
FGFR1-208ENST00000397108 CENPBP07199 599 aaPredicted RBP18.04■□□□□ 0.48
FGFR1-208ENST00000397108 PRXQ9BXM0 1461 aa18.02■□□□□ 0.48
FGFR1-208ENST00000397108 KIAA0586Q9BVV6 1533 aa18.02■□□□□ 0.48
FGFR1-208ENST00000397108 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
FGFR1-208ENST00000397108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
FGFR1-208ENST00000397108 ARAP1Q96P48 1450 aa17.99■□□□□ 0.47
FGFR1-208ENST00000397108 CSRNP3Q8WYN3 585 aa17.98■□□□□ 0.47
FGFR1-208ENST00000397108 DIEXFQ68CQ4 756 aaKnown RBP17.97■□□□□ 0.47
FGFR1-208ENST00000397108 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.47
FGFR1-208ENST00000397108 IQGAP2Q13576 1575 aa17.95■□□□□ 0.46
FGFR1-208ENST00000397108 CTTNBP2Q8WZ74 1663 aa17.95■□□□□ 0.46
FGFR1-208ENST00000397108 JPH4Q96JJ6 628 aa17.94■□□□□ 0.46
FGFR1-208ENST00000397108 PRG4Q92954 1404 aaPredicted RBP17.93■□□□□ 0.46
FGFR1-208ENST00000397108 CCER1Q8TC90 406 aaPredicted RBP17.91■□□□□ 0.46
FGFR1-208ENST00000397108 KIF21BO75037 1637 aa17.9■□□□□ 0.46
FGFR1-208ENST00000397108 CYB5RLQ6IPT4 315 aa17.89■□□□□ 0.45
FGFR1-208ENST00000397108 YTHDC1Q96MU7 727 aaKnown RBP17.87■□□□□ 0.45
FGFR1-208ENST00000397108 UGGT2Q9NYU1 1516 aa17.86■□□□□ 0.45
FGFR1-208ENST00000397108 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
FGFR1-208ENST00000397108 DISP1Q96F81 1524 aa17.8■□□□□ 0.44
FGFR1-208ENST00000397108 KIAA0556O60303 1618 aa17.78■□□□□ 0.44
FGFR1-208ENST00000397108 GOLGA3Q08378 1498 aa17.76■□□□□ 0.43
FGFR1-208ENST00000397108 TNIKQ9UKE5 1360 aa17.75■□□□□ 0.43
FGFR1-208ENST00000397108 PTPRGP23470 1445 aa17.72■□□□□ 0.43
FGFR1-208ENST00000397108 SAMD9Q5K651 1589 aa17.7■□□□□ 0.42
FGFR1-208ENST00000397108 ADCY10Q96PN6 1610 aa17.69■□□□□ 0.42
FGFR1-208ENST00000397108 TTBK1Q5TCY1 1321 aaPredicted RBP17.67■□□□□ 0.42
FGFR1-208ENST00000397108 UBTFP17480 764 aaKnown RBP17.64■□□□□ 0.41
FGFR1-208ENST00000397108 EFCAB5A4FU69 1503 aa17.63■□□□□ 0.41
FGFR1-208ENST00000397108 UHRF1BP1LA0JNW5 1464 aa17.63■□□□□ 0.41
FGFR1-208ENST00000397108 UACAQ9BZF9 1416 aa17.62■□□□□ 0.41
FGFR1-208ENST00000397108 ABCC2Q92887 1545 aa17.61■□□□□ 0.41
FGFR1-208ENST00000397108 ABCA8O94911 1581 aa17.58■□□□□ 0.41
FGFR1-208ENST00000397108 MAPKBP1O60336 1514 aa17.57■□□□□ 0.4
FGFR1-208ENST00000397108 PLB1Q6P1J6 1458 aa17.56■□□□□ 0.4
FGFR1-208ENST00000397108 RANGAP1P46060 587 aaPredicted RBP17.56■□□□□ 0.4
FGFR1-208ENST00000397108 P3H3Q8IVL6 736 aa17.56■□□□□ 0.4
FGFR1-208ENST00000397108 NPM1P06748 294 aaKnown RBP eCLIP17.55■□□□□ 0.4
FGFR1-208ENST00000397108 FHOD3Q2V2M9 1422 aa17.54■□□□□ 0.4
FGFR1-208ENST00000397108 KDM5BQ9UGL1 1544 aa17.53■□□□□ 0.4
FGFR1-208ENST00000397108 MIER1Q8N108 512 aa17.53■□□□□ 0.4
FGFR1-208ENST00000397108 ARHGAP35Q9NRY4 1499 aa17.52■□□□□ 0.4
FGFR1-208ENST00000397108 ZNF316A6NFI3 1004 aaPredicted RBP17.52■□□□□ 0.4
FGFR1-208ENST00000397108 ZCCHC11Q5TAX3 1644 aaKnown RBP17.52■□□□□ 0.39
FGFR1-208ENST00000397108 RAPGEF6Q8TEU7 1601 aa17.51■□□□□ 0.39
FGFR1-208ENST00000397108 TRHP20396 242 aaPredicted RBP17.49■□□□□ 0.39
FGFR1-208ENST00000397108 KIF13AQ9H1H9 1805 aa17.48■□□□□ 0.39
FGFR1-208ENST00000397108 BCL11AQ9H165 835 aa17.48■□□□□ 0.39
FGFR1-208ENST00000397108 ABCC10Q5T3U5 1492 aa17.45■□□□□ 0.38
FGFR1-208ENST00000397108 DIP2BQ9P265 1576 aa17.45■□□□□ 0.38
FGFR1-208ENST00000397108 ASXL2Q76L83 1435 aa17.45■□□□□ 0.38
FGFR1-208ENST00000397108 FMN1Q68DA7 1419 aa17.44■□□□□ 0.38
FGFR1-208ENST00000397108 CLIP1P30622 1438 aa17.43■□□□□ 0.38
FGFR1-208ENST00000397108 NUP153P49790 1475 aaKnown RBP17.42■□□□□ 0.38
FGFR1-208ENST00000397108 ATP10BO94823 1461 aa17.4■□□□□ 0.38
FGFR1-208ENST00000397108 WDR7Q9Y4E6 1490 aa17.38■□□□□ 0.37
FGFR1-208ENST00000397108 GLI2P10070 1586 aa17.38■□□□□ 0.37
FGFR1-208ENST00000397108 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
FGFR1-208ENST00000397108 HECW1Q76N89 1606 aa17.37■□□□□ 0.37
FGFR1-208ENST00000397108 FAM69CQ0P6D2 419 aa17.36■□□□□ 0.37
FGFR1-208ENST00000397108 EPRSP07814 1512 aaKnown RBP17.36■□□□□ 0.37
FGFR1-208ENST00000397108 ANP32EQ9BTT0 268 aa17.34■□□□□ 0.37
FGFR1-208ENST00000397108 ARID3CA6NKF2 412 aa17.33■□□□□ 0.36
FGFR1-208ENST00000397108 PCF11O94913 1555 aaKnown RBP17.33■□□□□ 0.36
FGFR1-208ENST00000397108 LRRIQ1Q96JM4 1722 aa17.31■□□□□ 0.36
FGFR1-208ENST00000397108 CASKIN1Q8WXD9 1431 aa17.31■□□□□ 0.36
FGFR1-208ENST00000397108 MAP3K4Q9Y6R4 1608 aa17.31■□□□□ 0.36
FGFR1-208ENST00000397108 CDK13Q14004 1512 aaKnown RBP17.3■□□□□ 0.36
FGFR1-208ENST00000397108 FYCO1Q9BQS8 1478 aa17.29■□□□□ 0.36
FGFR1-208ENST00000397108 TSPOAP1O95153 1857 aa17.29■□□□□ 0.36
FGFR1-208ENST00000397108 SUPT16HQ9Y5B9 1047 aaKnown RBP17.29■□□□□ 0.36
FGFR1-208ENST00000397108 PPRC1Q5VV67 1664 aaKnown RBP17.27■□□□□ 0.36
FGFR1-208ENST00000397108 CFAP43Q8NDM7 1665 aa17.27■□□□□ 0.36
FGFR1-208ENST00000397108 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
FGFR1-208ENST00000397108 TSHZ2Q9NRE2 1034 aa17.27■□□□□ 0.36
FGFR1-208ENST00000397108 CCDC18Q5T9S5 1454 aa17.25■□□□□ 0.35
FGFR1-208ENST00000397108 ATP1B4Q9UN42 357 aaPredicted RBP17.24■□□□□ 0.35
FGFR1-208ENST00000397108 ABCA9Q8IUA7 1624 aa17.24■□□□□ 0.35
FGFR1-208ENST00000397108 KCNH8Q96L42 1107 aa17.23■□□□□ 0.35
FGFR1-208ENST00000397108 PLEKHD1A6NEE1 506 aa17.22■□□□□ 0.35
FGFR1-208ENST00000397108 MAGI3Q5TCQ9 1506 aa17.19■□□□□ 0.34
FGFR1-208ENST00000397108 CD109Q6YHK3 1445 aa17.19■□□□□ 0.34
FGFR1-208ENST00000397108 TEX14Q8IWB6 1497 aa17.19■□□□□ 0.34
FGFR1-208ENST00000397108 CDK11AQ9UQ88 783 aaPredicted RBP17.18■□□□□ 0.34
FGFR1-208ENST00000397108 VPS8Q8N3P4 1428 aa17.17■□□□□ 0.34
FGFR1-208ENST00000397108 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.16■□□□□ 0.34
FGFR1-208ENST00000397108 TROQ12816 1431 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms