RNA–Protein interactions for RNA: ENST00000396741.3

CYTH3-202, Transcript of cytohesin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CYTH3, Length 4,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-202ENST00000396741 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
CYTH3-202ENST00000396741 TSPY4P0CV99 314 aa20.22■□□□□ 0.83
CYTH3-202ENST00000396741 TSPY10P0CW01 314 aa20.22■□□□□ 0.83
CYTH3-202ENST00000396741 CUX2O14529 1486 aa20.2■□□□□ 0.82
CYTH3-202ENST00000396741 EIF4G2P78344 907 aaKnown RBP eCLIP20.18■□□□□ 0.823e-6■■■■■ 32.5
CYTH3-202ENST00000396741 NPM2Q86SE8 214 aaKnown RBP20.18■□□□□ 0.82
CYTH3-202ENST00000396741 CARMIL1Q5VZK9 1371 aa20.18■□□□□ 0.82
CYTH3-202ENST00000396741 CCNB3Q8WWL7 1395 aa20.18■□□□□ 0.82
CYTH3-202ENST00000396741 TMC1Q8TDI8 760 aa20.18■□□□□ 0.82
CYTH3-202ENST00000396741 VPS8Q8N3P4 1428 aa20.16■□□□□ 0.82
CYTH3-202ENST00000396741 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
CYTH3-202ENST00000396741 KCNH8Q96L42 1107 aa20.15■□□□□ 0.82
CYTH3-202ENST00000396741 RGL3Q3MIN7 710 aa20.14■□□□□ 0.81
CYTH3-202ENST00000396741 CANXP27824 592 aaKnown RBP20.12■□□□□ 0.81
CYTH3-202ENST00000396741 UNC13AQ9UPW8 1703 aa20.12■□□□□ 0.81
CYTH3-202ENST00000396741 CFDP1Q9UEE9 299 aaPredicted RBP20.08■□□□□ 0.8
CYTH3-202ENST00000396741 PLEKHD1A6NEE1 506 aa20.05■□□□□ 0.8
CYTH3-202ENST00000396741 TOP2AP11388 1531 aaKnown RBP20.05■□□□□ 0.8
CYTH3-202ENST00000396741 RAPGEF2Q9Y4G8 1499 aa20.04■□□□□ 0.8
CYTH3-202ENST00000396741 SUPT16HQ9Y5B9 1047 aaKnown RBP20.02■□□□□ 0.8
CYTH3-202ENST00000396741 CCDC136Q96JN2 1154 aa20.02■□□□□ 0.8
CYTH3-202ENST00000396741 FOXD1Q16676 465 aa20.02■□□□□ 0.79
CYTH3-202ENST00000396741 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
CYTH3-202ENST00000396741 ANP32AP39687 249 aaKnown RBP19.99■□□□□ 0.79
CYTH3-202ENST00000396741 PLPPR3Q6T4P5 718 aa19.98■□□□□ 0.79
CYTH3-202ENST00000396741 SLC24A1O60721 1099 aa19.97■□□□□ 0.79
CYTH3-202ENST00000396741 RAB3GAP2Q9H2M9 1393 aa19.94■□□□□ 0.78
CYTH3-202ENST00000396741 FHAD1B1AJZ9 1412 aa19.93■□□□□ 0.78
CYTH3-202ENST00000396741 NPM1P06748 294 aaKnown RBP eCLIP19.93■□□□□ 0.78
CYTH3-202ENST00000396741 ATAD2BQ9ULI0 1458 aa19.93■□□□□ 0.78
CYTH3-202ENST00000396741 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
CYTH3-202ENST00000396741 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
CYTH3-202ENST00000396741 SETD5Q9C0A6 1442 aa19.89■□□□□ 0.78
CYTH3-202ENST00000396741 CARD11Q9BXL7 1154 aa19.89■□□□□ 0.78
CYTH3-202ENST00000396741 SMARCA4P51532 1647 aa19.89■□□□□ 0.78
CYTH3-202ENST00000396741 STAG3Q9UJ98 1225 aa19.89■□□□□ 0.77
CYTH3-202ENST00000396741 NBR1Q14596 966 aa19.86■□□□□ 0.77
CYTH3-202ENST00000396741 NEFMP07197 916 aa19.84■□□□□ 0.77
CYTH3-202ENST00000396741 WDR43Q15061 677 aaKnown RBP eCLIP19.84■□□□□ 0.77
CYTH3-202ENST00000396741 FHOD3Q2V2M9 1422 aa19.83■□□□□ 0.76
CYTH3-202ENST00000396741 ZBTB47Q9UFB7 747 aaPredicted RBP19.8■□□□□ 0.76
CYTH3-202ENST00000396741 HSPA5P11021 654 aaKnown RBP19.8■□□□□ 0.76
CYTH3-202ENST00000396741 BICRAQ9NZM4 1560 aa19.79■□□□□ 0.76
CYTH3-202ENST00000396741 CADPSQ9ULU8 1353 aa19.78■□□□□ 0.76
CYTH3-202ENST00000396741 DCAF11Q8TEB1 546 aa19.77■□□□□ 0.76
CYTH3-202ENST00000396741 ARHGAP35Q9NRY4 1499 aa19.77■□□□□ 0.76
CYTH3-202ENST00000396741 ESF1Q9H501 851 aaKnown RBP19.77■□□□□ 0.75
CYTH3-202ENST00000396741 PPP1R15AO75807 674 aaPredicted RBP19.75■□□□□ 0.75
CYTH3-202ENST00000396741 DHX57Q6P158 1386 aaKnown RBP19.74■□□□□ 0.75
CYTH3-202ENST00000396741 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
CYTH3-202ENST00000396741 B4GALNT3Q6L9W6 998 aa19.74■□□□□ 0.75
CYTH3-202ENST00000396741 PEG3Q9GZU2 1588 aa19.71■□□□□ 0.75
CYTH3-202ENST00000396741 PKD2Q13563 968 aa19.71■□□□□ 0.75
CYTH3-202ENST00000396741 CC2D1BQ5T0F9 858 aaKnown RBP19.71■□□□□ 0.75
CYTH3-202ENST00000396741 MPHOSPH9Q99550 1183 aa19.71■□□□□ 0.75
CYTH3-202ENST00000396741 TIMELESSQ9UNS1 1208 aa19.7■□□□□ 0.74
CYTH3-202ENST00000396741 NEUROD2Q15784 382 aa19.67■□□□□ 0.74
CYTH3-202ENST00000396741 L3MBTL2Q969R5 705 aa19.66■□□□□ 0.74
CYTH3-202ENST00000396741 TNNT2P45379 298 aaPredicted RBP19.65■□□□□ 0.74
CYTH3-202ENST00000396741 KNSTRNQ9Y448 316 aa19.64■□□□□ 0.74
CYTH3-202ENST00000396741 FMN1Q68DA7 1419 aa19.62■□□□□ 0.73
CYTH3-202ENST00000396741 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.61■□□□□ 0.73
CYTH3-202ENST00000396741 IGF1RP08069 1367 aa19.6■□□□□ 0.73
CYTH3-202ENST00000396741 CCER2I3L3R5 266 aa19.6■□□□□ 0.73
CYTH3-202ENST00000396741 PLEKHG5O94827 1062 aa19.6■□□□□ 0.73
CYTH3-202ENST00000396741 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
CYTH3-202ENST00000396741 ARXQ96QS3 562 aa19.57■□□□□ 0.72
CYTH3-202ENST00000396741 PPP4R2Q9NY27 417 aa19.57■□□□□ 0.72
CYTH3-202ENST00000396741 PPM1GO15355 546 aaPredicted RBP19.55■□□□□ 0.72
CYTH3-202ENST00000396741 HNRNPMP52272 730 aaKnown RBP eCLIP19.54■□□□□ 0.722e-7■■□□□ 14.5
CYTH3-202ENST00000396741 NUP155O75694 1391 aa19.53■□□□□ 0.72
CYTH3-202ENST00000396741 FANCD2Q9BXW9 1451 aa19.52■□□□□ 0.71
CYTH3-202ENST00000396741 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
CYTH3-202ENST00000396741 UPF2Q9HAU5 1272 aaKnown RBP19.51■□□□□ 0.71
CYTH3-202ENST00000396741 HSP90AA1P07900 732 aaKnown RBP19.51■□□□□ 0.71
CYTH3-202ENST00000396741 ANP32EQ9BTT0 268 aa19.5■□□□□ 0.71
CYTH3-202ENST00000396741 RBM19Q9Y4C8 960 aaKnown RBP19.48■□□□□ 0.71
CYTH3-202ENST00000396741 SAFB2Q14151 953 aaKnown RBP eCLIP19.48■□□□□ 0.71
CYTH3-202ENST00000396741 RGS3P49796 1198 aa19.47■□□□□ 0.71
CYTH3-202ENST00000396741 KIF21BO75037 1637 aa19.47■□□□□ 0.71
CYTH3-202ENST00000396741 FGD5Q6ZNL6 1462 aa19.47■□□□□ 0.71
CYTH3-202ENST00000396741 PHLDB1Q86UU1 1377 aa19.46■□□□□ 0.71
CYTH3-202ENST00000396741 JPH4Q96JJ6 628 aa19.46■□□□□ 0.71
CYTH3-202ENST00000396741 CDCA8Q53HL2 280 aa19.45■□□□□ 0.7
CYTH3-202ENST00000396741 FRAT1Q92837 279 aaPredicted RBP19.44■□□□□ 0.7
CYTH3-202ENST00000396741 TMF1P82094 1093 aa19.44■□□□□ 0.7
CYTH3-202ENST00000396741 SYNJ1O43426 1573 aa19.44■□□□□ 0.7
CYTH3-202ENST00000396741 GGT6Q6P531 493 aa19.43■□□□□ 0.7
CYTH3-202ENST00000396741 TSHZ2Q9NRE2 1034 aa19.43■□□□□ 0.7
CYTH3-202ENST00000396741 ZNF644Q9H582 1327 aaPredicted RBP19.43■□□□□ 0.7
CYTH3-202ENST00000396741 ARAP1Q96P48 1450 aa19.42■□□□□ 0.7
CYTH3-202ENST00000396741 LAS1LQ9Y4W2 734 aaKnown RBP19.39■□□□□ 0.7
CYTH3-202ENST00000396741 CARMIL2Q6F5E8 1435 aa19.39■□□□□ 0.69
CYTH3-202ENST00000396741 ANKRD30AQ9BXX3 1397 aa19.36■□□□□ 0.69
CYTH3-202ENST00000396741 ZBTB7CA1YPR0 619 aa19.36■□□□□ 0.69
CYTH3-202ENST00000396741 U2SURPO15042 1029 aaKnown RBP19.36■□□□□ 0.69
CYTH3-202ENST00000396741 CFAP53Q96M91 514 aa19.36■□□□□ 0.69
CYTH3-202ENST00000396741 ROCK2O75116 1388 aaKnown RBP19.36■□□□□ 0.69
CYTH3-202ENST00000396741 ST20-MTHFSA0A0A6YYL1 179 aa19.36■□□□□ 0.69
CYTH3-202ENST00000396741 EIF5BO60841 1220 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms