RNA–Protein interactions for RNA: ENST00000396292.8

TRPM3-214, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

APPRIS P4 TSL 5 BASIC

Gene TRPM3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-214ENST00000396292 ARXQ96QS3 562 aa12.49□□□□□ -0.41
TRPM3-214ENST00000396292 TMC1Q8TDI8 760 aa12.49□□□□□ -0.41
TRPM3-214ENST00000396292 WDR43Q15061 677 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRPM3-214ENST00000396292 TONSLQ96HA7 1378 aa12.45□□□□□ -0.42
TRPM3-214ENST00000396292 RTN4Q9NQC3 1192 aaKnown RBP12.45□□□□□ -0.42
TRPM3-214ENST00000396292 STAG3Q9UJ98 1225 aa12.44□□□□□ -0.42
TRPM3-214ENST00000396292 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
TRPM3-214ENST00000396292 CASC1Q6TDU7 716 aa12.41□□□□□ -0.42
TRPM3-214ENST00000396292 FAM9BQ8IZU0 186 aa12.41□□□□□ -0.42
TRPM3-214ENST00000396292 CHAF1AQ13111 956 aaPredicted RBP12.41□□□□□ -0.42
TRPM3-214ENST00000396292 NAP1L5Q96NT1 182 aaPredicted RBP12.39□□□□□ -0.43
TRPM3-214ENST00000396292 CHMP4BQ9H444 224 aaKnown RBP12.36□□□□□ -0.43
TRPM3-214ENST00000396292 NOP58Q9Y2X3 529 aaKnown RBP12.35□□□□□ -0.43
TRPM3-214ENST00000396292 RSF1Q96T23 1441 aaPredicted RBP12.35□□□□□ -0.43
TRPM3-214ENST00000396292 UBE2Q2Q8WVN8 375 aa12.35□□□□□ -0.43
TRPM3-214ENST00000396292 CEP162Q5TB80 1403 aa12.34□□□□□ -0.43
TRPM3-214ENST00000396292 MRS2Q9HD23 443 aa12.34□□□□□ -0.43
TRPM3-214ENST00000396292 SALL2Q9Y467 1007 aaPredicted RBP12.34□□□□□ -0.43
TRPM3-214ENST00000396292 CHGAP10645 457 aaKnown RBP12.33□□□□□ -0.43
TRPM3-214ENST00000396292 FANCIQ9NVI1 1328 aa12.32□□□□□ -0.44
TRPM3-214ENST00000396292 PKNOX2Q96KN3 472 aa12.32□□□□□ -0.44
TRPM3-214ENST00000396292 BAZ1AQ9NRL2 1556 aaPredicted RBP12.31□□□□□ -0.44
TRPM3-214ENST00000396292 BAZ1BQ9UIG0 1483 aaKnown RBP12.31□□□□□ -0.44
TRPM3-214ENST00000396292 EEA1Q15075 1411 aa12.31□□□□□ -0.44
TRPM3-214ENST00000396292 DDX10Q13206 875 aaKnown RBP12.3□□□□□ -0.44
TRPM3-214ENST00000396292 TNIKQ9UKE5 1360 aa12.3□□□□□ -0.44
TRPM3-214ENST00000396292 FBLN2P98095 1184 aa12.29□□□□□ -0.44
TRPM3-214ENST00000396292 ZNF777Q9ULD5 760 aaPredicted RBP12.29□□□□□ -0.44
TRPM3-214ENST00000396292 USP35Q9P2H5 1018 aa12.28□□□□□ -0.44
TRPM3-214ENST00000396292 CFAP44Q96MT7 982 aa12.27□□□□□ -0.44
TRPM3-214ENST00000396292 GOLGA6L4A6NEF3 574 aa12.26□□□□□ -0.45
TRPM3-214ENST00000396292 MS4A1P11836 297 aa12.26□□□□□ -0.45
TRPM3-214ENST00000396292 PNNQ9H307 717 aaKnown RBP12.26□□□□□ -0.45
TRPM3-214ENST00000396292 CFAP53Q96M91 514 aa12.25□□□□□ -0.45
TRPM3-214ENST00000396292 MSNP26038 577 aaKnown RBP12.25□□□□□ -0.45
TRPM3-214ENST00000396292 PLCB2Q00722 1185 aa12.25□□□□□ -0.45
TRPM3-214ENST00000396292 NPM1P06748 294 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRPM3-214ENST00000396292 TNNT3P45378 269 aaPredicted RBP12.24□□□□□ -0.45
TRPM3-214ENST00000396292 GOLGA3Q08378 1498 aa12.23□□□□□ -0.45
TRPM3-214ENST00000396292 FGD1P98174 961 aa12.22□□□□□ -0.45
TRPM3-214ENST00000396292 CDCA8Q53HL2 280 aa12.22□□□□□ -0.45
TRPM3-214ENST00000396292 KIAA2012Q0VF49 1180 aa12.21□□□□□ -0.45
TRPM3-214ENST00000396292 PTMSP20962 102 aa12.2□□□□□ -0.46
TRPM3-214ENST00000396292 CLIP1P30622 1438 aa12.2□□□□□ -0.46
TRPM3-214ENST00000396292 PODXL2Q9NZ53 605 aa12.19□□□□□ -0.46
TRPM3-214ENST00000396292 TSPY4P0CV99 314 aa12.18□□□□□ -0.46
TRPM3-214ENST00000396292 TSPY10P0CW01 314 aa12.18□□□□□ -0.46
TRPM3-214ENST00000396292 FTSJ3Q8IY81 847 aaKnown RBP12.18□□□□□ -0.46
TRPM3-214ENST00000396292 WRNQ14191 1432 aaPredicted RBP eCLIP12.18□□□□□ -0.46
TRPM3-214ENST00000396292 CECR2Q9BXF3 1484 aa12.18□□□□□ -0.46
TRPM3-214ENST00000396292 IRX6P78412 446 aaPredicted RBP12.18□□□□□ -0.46
TRPM3-214ENST00000396292 HSP90AB1P08238 724 aaKnown RBP12.17□□□□□ -0.46
TRPM3-214ENST00000396292 EIF4G2P78344 907 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRPM3-214ENST00000396292 A0A0G2JS52 829 aa12.17□□□□□ -0.46
TRPM3-214ENST00000396292 SMARCA2P51531 1590 aa12.16□□□□□ -0.46
TRPM3-214ENST00000396292 TULP1O00294 542 aaPredicted RBP12.16□□□□□ -0.46
TRPM3-214ENST00000396292 RSPH6AQ9H0K4 717 aa12.16□□□□□ -0.46
TRPM3-214ENST00000396292 KCNJ4P48050 445 aa12.15□□□□□ -0.46
TRPM3-214ENST00000396292 PPP4R2Q9NY27 417 aa12.15□□□□□ -0.47
TRPM3-214ENST00000396292 CCDC34Q96HJ3 373 aa12.14□□□□□ -0.47
TRPM3-214ENST00000396292 GOLGA6L1Q8N7Z2 621 aa12.14□□□□□ -0.47
TRPM3-214ENST00000396292 HTATSF1O43719 755 aaKnown RBP12.13□□□□□ -0.47
TRPM3-214ENST00000396292 MCCP23508 829 aa12.13□□□□□ -0.47
TRPM3-214ENST00000396292 HAP1P54257 671 aaPredicted RBP12.13□□□□□ -0.47
TRPM3-214ENST00000396292 NUDCQ9Y266 331 aa12.13□□□□□ -0.47
TRPM3-214ENST00000396292 VSIG10Q8N0Z9 540 aa12.12□□□□□ -0.47
TRPM3-214ENST00000396292 MSH5O43196 834 aa12.12□□□□□ -0.47
TRPM3-214ENST00000396292 NOC3LQ8WTT2 800 aaKnown RBP12.12□□□□□ -0.47
TRPM3-214ENST00000396292 CCER2I3L3R5 266 aa12.12□□□□□ -0.47
TRPM3-214ENST00000396292 HSCBQ8IWL3 235 aa12.12□□□□□ -0.47
TRPM3-214ENST00000396292 DRC7Q8IY82 874 aa12.12□□□□□ -0.47
TRPM3-214ENST00000396292 ERCC6Q03468 1493 aa12.11□□□□□ -0.47
TRPM3-214ENST00000396292 P3H3Q8IVL6 736 aa12.1□□□□□ -0.47
TRPM3-214ENST00000396292 IL27Q8NEV9 243 aa12.1□□□□□ -0.47
TRPM3-214ENST00000396292 CALRP27797 417 aaKnown RBP12.09□□□□□ -0.47
TRPM3-214ENST00000396292 MAPK8IP3Q9UPT6 1336 aa12.09□□□□□ -0.47
TRPM3-214ENST00000396292 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
TRPM3-214ENST00000396292 GOLGA2Q08379 1002 aa12.08□□□□□ -0.48
TRPM3-214ENST00000396292 SYAP1Q96A49 352 aaPredicted RBP12.08□□□□□ -0.48
TRPM3-214ENST00000396292 ARID4BQ4LE39 1312 aaPredicted RBP12.07□□□□□ -0.48
TRPM3-214ENST00000396292 TPM4P67936 248 aa12.06□□□□□ -0.48
TRPM3-214ENST00000396292 OS9Q13438 667 aaPredicted RBP12.06□□□□□ -0.48
TRPM3-214ENST00000396292 KNSTRNQ9Y448 316 aa12.06□□□□□ -0.48
TRPM3-214ENST00000396292 GBP4Q96PP9 640 aa12.06□□□□□ -0.48
TRPM3-214ENST00000396292 LAS1LQ9Y4W2 734 aaKnown RBP12.06□□□□□ -0.48
TRPM3-214ENST00000396292 SETQ01105 290 aaPredicted RBP12.06□□□□□ -0.48
TRPM3-214ENST00000396292 MROH2BQ7Z745 1585 aa12.06□□□□□ -0.48
TRPM3-214ENST00000396292 ARID3CA6NKF2 412 aa12.06□□□□□ -0.48
TRPM3-214ENST00000396292 CLSTN1O94985 981 aa12.05□□□□□ -0.48
TRPM3-214ENST00000396292 PPP1R15AO75807 674 aaPredicted RBP12.05□□□□□ -0.48
TRPM3-214ENST00000396292 C14orf37Q86TY3 774 aa12.05□□□□□ -0.48
TRPM3-214ENST00000396292 IPO9Q96P70 1041 aaKnown RBP12.05□□□□□ -0.48
TRPM3-214ENST00000396292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRPM3-214ENST00000396292 A0A0U1RQG5 324 aaPredicted RBP12.04□□□□□ -0.48
TRPM3-214ENST00000396292 TPRNQ4KMQ1 711 aa12.04□□□□□ -0.48
TRPM3-214ENST00000396292 KDM2AQ9Y2K7 1162 aa12.04□□□□□ -0.48
TRPM3-214ENST00000396292 NAP1L2Q9ULW6 460 aaPredicted RBP12.03□□□□□ -0.48
TRPM3-214ENST00000396292 NPHP1O15259 732 aa12.03□□□□□ -0.48
TRPM3-214ENST00000396292 TIMELESSQ9UNS1 1208 aa12.03□□□□□ -0.48
TRPM3-214ENST00000396292 CHMP4AQ9BY43 222 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms