RNA–Protein interactions for RNA: ENST00000396215.7

LDHC-202, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-202ENST00000396215 MSH5O43196 834 aa17.96■□□□□ 0.47
LDHC-202ENST00000396215 ILDR1Q86SU0 546 aaPredicted RBP17.96■□□□□ 0.47
LDHC-202ENST00000396215 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
LDHC-202ENST00000396215 ABCC10Q5T3U5 1492 aa17.95■□□□□ 0.46
LDHC-202ENST00000396215 KDM4FA0A1W2PPD8 638 aa17.95■□□□□ 0.46
LDHC-202ENST00000396215 FHAD1B1AJZ9 1412 aa17.91■□□□□ 0.46
LDHC-202ENST00000396215 FAM69CQ0P6D2 419 aa17.9■□□□□ 0.46
LDHC-202ENST00000396215 MAPKBP1O60336 1514 aa17.89■□□□□ 0.45
LDHC-202ENST00000396215 PRG4Q92954 1404 aaPredicted RBP17.88■□□□□ 0.45
LDHC-202ENST00000396215 WRNQ14191 1432 aaPredicted RBP eCLIP17.86■□□□□ 0.45
LDHC-202ENST00000396215 DIP2BQ9P265 1576 aa17.86■□□□□ 0.45
LDHC-202ENST00000396215 JPH4Q96JJ6 628 aa17.85■□□□□ 0.45
LDHC-202ENST00000396215 ERICH3Q5RHP9 1530 aa17.84■□□□□ 0.45
LDHC-202ENST00000396215 KDM6BO15054 1643 aa17.82■□□□□ 0.44
LDHC-202ENST00000396215 NPM1P06748 294 aaKnown RBP eCLIP17.81■□□□□ 0.44
LDHC-202ENST00000396215 ADCY10Q96PN6 1610 aa17.76■□□□□ 0.43
LDHC-202ENST00000396215 TOP2BQ02880 1626 aa17.74■□□□□ 0.43
LDHC-202ENST00000396215 BIVM-ERCC5R4GMW8 1640 aa17.74■□□□□ 0.43
LDHC-202ENST00000396215 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
LDHC-202ENST00000396215 TSPOAP1O95153 1857 aa17.68■□□□□ 0.42
LDHC-202ENST00000396215 ADGRL1O94910 1474 aa17.63■□□□□ 0.41
LDHC-202ENST00000396215 KIAA0586Q9BVV6 1533 aa17.61■□□□□ 0.41
LDHC-202ENST00000396215 GLI2P10070 1586 aa17.59■□□□□ 0.41
LDHC-202ENST00000396215 PPRC1Q5VV67 1664 aaKnown RBP17.58■□□□□ 0.41
LDHC-202ENST00000396215 HECW2Q9P2P5 1572 aa17.57■□□□□ 0.4
LDHC-202ENST00000396215 PLB1Q6P1J6 1458 aa17.54■□□□□ 0.4
LDHC-202ENST00000396215 ABCC2Q92887 1545 aa17.53■□□□□ 0.4
LDHC-202ENST00000396215 PTPRGP23470 1445 aa17.53■□□□□ 0.4
LDHC-202ENST00000396215 COL17A1Q9UMD9 1497 aaPredicted RBP17.51■□□□□ 0.39
LDHC-202ENST00000396215 ASXL2Q76L83 1435 aa17.51■□□□□ 0.39
LDHC-202ENST00000396215 UHRF1BP1LA0JNW5 1464 aa17.48■□□□□ 0.39
LDHC-202ENST00000396215 IGF1RP08069 1367 aa17.47■□□□□ 0.39
LDHC-202ENST00000396215 TNIKQ9UKE5 1360 aa17.46■□□□□ 0.39
LDHC-202ENST00000396215 FBXO41Q8TF61 875 aa17.44■□□□□ 0.38
LDHC-202ENST00000396215 MAP3K4Q9Y6R4 1608 aa17.43■□□□□ 0.38
LDHC-202ENST00000396215 CUL7Q14999 1698 aa17.43■□□□□ 0.38
LDHC-202ENST00000396215 TEX14Q8IWB6 1497 aa17.43■□□□□ 0.38
LDHC-202ENST00000396215 EPRSP07814 1512 aaKnown RBP17.42■□□□□ 0.38
LDHC-202ENST00000396215 CARMIL2Q6F5E8 1435 aa17.42■□□□□ 0.38
LDHC-202ENST00000396215 UACAQ9BZF9 1416 aa17.39■□□□□ 0.38
LDHC-202ENST00000396215 KDM5BQ9UGL1 1544 aa17.39■□□□□ 0.37
LDHC-202ENST00000396215 KIF27Q86VH2 1401 aa17.37■□□□□ 0.37
LDHC-202ENST00000396215 TTBK1Q5TCY1 1321 aaPredicted RBP17.32■□□□□ 0.36
LDHC-202ENST00000396215 SUPT5HO00267 1087 aaKnown RBP17.32■□□□□ 0.36
LDHC-202ENST00000396215 CARMIL1Q5VZK9 1371 aa17.31■□□□□ 0.36
LDHC-202ENST00000396215 IQGAP2Q13576 1575 aa17.31■□□□□ 0.36
LDHC-202ENST00000396215 DISP1Q96F81 1524 aa17.31■□□□□ 0.36
LDHC-202ENST00000396215 ZCCHC11Q5TAX3 1644 aaKnown RBP17.29■□□□□ 0.36
LDHC-202ENST00000396215 MAGI3Q5TCQ9 1506 aa17.27■□□□□ 0.36
LDHC-202ENST00000396215 WDR7Q9Y4E6 1490 aa17.24■□□□□ 0.35
LDHC-202ENST00000396215 UGGT2Q9NYU1 1516 aa17.23■□□□□ 0.35
LDHC-202ENST00000396215 CFAP43Q8NDM7 1665 aa17.21■□□□□ 0.35
LDHC-202ENST00000396215 CD109Q6YHK3 1445 aa17.21■□□□□ 0.34
LDHC-202ENST00000396215 KIAA0556O60303 1618 aa17.17■□□□□ 0.34
LDHC-202ENST00000396215 KIF21BO75037 1637 aa17.17■□□□□ 0.34
LDHC-202ENST00000396215 ARAP3Q8WWN8 1544 aa17.16■□□□□ 0.34
LDHC-202ENST00000396215 PTPRMP28827 1452 aa17.15■□□□□ 0.34
LDHC-202ENST00000396215 ADAMTSL3P82987 1691 aa17.15■□□□□ 0.34
LDHC-202ENST00000396215 PHLDB1Q86UU1 1377 aa17.09■□□□□ 0.33
LDHC-202ENST00000396215 LMTK3Q96Q04 1460 aa17.09■□□□□ 0.33
LDHC-202ENST00000396215 PCF11O94913 1555 aaKnown RBP17.08■□□□□ 0.32
LDHC-202ENST00000396215 RAPGEF2Q9Y4G8 1499 aa17.08■□□□□ 0.32
LDHC-202ENST00000396215 KCNH8Q96L42 1107 aa17.08■□□□□ 0.32
LDHC-202ENST00000396215 ABCA8O94911 1581 aa17.07■□□□□ 0.32
LDHC-202ENST00000396215 BCORL1Q5H9F3 1711 aa17.02■□□□□ 0.32
LDHC-202ENST00000396215 GOLGA3Q08378 1498 aa17.01■□□□□ 0.31
LDHC-202ENST00000396215 MADDQ8WXG6 1647 aa16.98■□□□□ 0.31
LDHC-202ENST00000396215 ABCA9Q8IUA7 1624 aa16.97■□□□□ 0.31
LDHC-202ENST00000396215 NEO1Q92859 1461 aa16.97■□□□□ 0.31
LDHC-202ENST00000396215 SOCS7O14512 581 aa16.96■□□□□ 0.31
LDHC-202ENST00000396215 CERKQ8TCT0 537 aa16.96■□□□□ 0.31
LDHC-202ENST00000396215 RAPGEF3O95398 923 aa16.95■□□□□ 0.3
LDHC-202ENST00000396215 CTTNBP2Q8WZ74 1663 aa16.94■□□□□ 0.3
LDHC-202ENST00000396215 ATP10BO94823 1461 aa16.93■□□□□ 0.3
LDHC-202ENST00000396215 ILDR2Q71H61 639 aa16.92■□□□□ 0.3
LDHC-202ENST00000396215 FRMPD1Q5SYB0 1578 aa16.92■□□□□ 0.3
LDHC-202ENST00000396215 ARID4BQ4LE39 1312 aaPredicted RBP16.9■□□□□ 0.3
LDHC-202ENST00000396215 RIMS1Q86UR5 1692 aaKnown RBP16.88■□□□□ 0.29
LDHC-202ENST00000396215 HSPA2P54652 639 aa16.88■□□□□ 0.29
LDHC-202ENST00000396215 ARHGEF40Q8TER5 1519 aa16.86■□□□□ 0.29
LDHC-202ENST00000396215 DISP3Q9P2K9 1392 aa16.86■□□□□ 0.29
LDHC-202ENST00000396215 FAM9AQ8IZU1 332 aaPredicted RBP16.84■□□□□ 0.29
LDHC-202ENST00000396215 FHOD3Q2V2M9 1422 aa16.83■□□□□ 0.28
LDHC-202ENST00000396215 RICTORQ6R327 1708 aa16.82■□□□□ 0.28
LDHC-202ENST00000396215 POGZQ7Z3K3 1410 aa16.81■□□□□ 0.28
LDHC-202ENST00000396215 DENND4BO75064 1496 aaPredicted RBP16.8■□□□□ 0.28
LDHC-202ENST00000396215 FANCAO15360 1455 aa16.8■□□□□ 0.28
LDHC-202ENST00000396215 PRXQ9BXM0 1461 aa16.8■□□□□ 0.28
LDHC-202ENST00000396215 ARID3CA6NKF2 412 aa16.78■□□□□ 0.28
LDHC-202ENST00000396215 ZMYM4Q5VZL5 1548 aa16.78■□□□□ 0.28
LDHC-202ENST00000396215 AKNAQ7Z591 1439 aa16.78■□□□□ 0.28
LDHC-202ENST00000396215 TTC37Q6PGP7 1564 aa16.77■□□□□ 0.27
LDHC-202ENST00000396215 MAGI2Q86UL8 1455 aa16.76■□□□□ 0.27
LDHC-202ENST00000396215 SIGLEC1Q9BZZ2 1709 aa16.75■□□□□ 0.27
LDHC-202ENST00000396215 YEATS2Q9ULM3 1422 aa16.74■□□□□ 0.27
LDHC-202ENST00000396215 DMRT2Q9Y5R5 561 aa16.74■□□□□ 0.27
LDHC-202ENST00000396215 RAPGEF6Q8TEU7 1601 aa16.74■□□□□ 0.27
LDHC-202ENST00000396215 EFCAB5A4FU69 1503 aa16.73■□□□□ 0.27
LDHC-202ENST00000396215 CFAP74Q9C0B2 1584 aa16.72■□□□□ 0.27
LDHC-202ENST00000396215 SAMD9Q5K651 1589 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms