RNA–Protein interactions for RNA: ENST00000396212.6

CCP110-203, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-203ENST00000396212 NAP1L5Q96NT1 182 aaPredicted RBP18.78■□□□□ 0.6
CCP110-203ENST00000396212 PPP4R2Q9NY27 417 aa18.77■□□□□ 0.6
CCP110-203ENST00000396212 SCRIBQ14160 1630 aa18.76■□□□□ 0.59
CCP110-203ENST00000396212 RBM19Q9Y4C8 960 aaKnown RBP18.75■□□□□ 0.59
CCP110-203ENST00000396212 CLIP1P30622 1438 aa18.75■□□□□ 0.59
CCP110-203ENST00000396212 ERICH6BQ5W0A0 696 aa18.74■□□□□ 0.59
CCP110-203ENST00000396212 B4GALNT3Q6L9W6 998 aa18.72■□□□□ 0.59
CCP110-203ENST00000396212 CEP162Q5TB80 1403 aa18.72■□□□□ 0.59
CCP110-203ENST00000396212 CHGAP10645 457 aaKnown RBP18.72■□□□□ 0.59
CCP110-203ENST00000396212 ZCCHC6Q5VYS8 1495 aaKnown RBP18.69■□□□□ 0.58
CCP110-203ENST00000396212 NCLP19338 710 aaKnown RBP18.68■□□□□ 0.58
CCP110-203ENST00000396212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCP110-203ENST00000396212 RRP7BPQ9NSQ0 103 aa18.65■□□□□ 0.58
CCP110-203ENST00000396212 GOLGA6L22H0YM25 854 aa18.62■□□□□ 0.57
CCP110-203ENST00000396212 TNNT2P45379 298 aaPredicted RBP18.62■□□□□ 0.57
CCP110-203ENST00000396212 TSHZ2Q9NRE2 1034 aa18.62■□□□□ 0.57
CCP110-203ENST00000396212 PTMAP06454 111 aaKnown RBP18.6■□□□□ 0.57
CCP110-203ENST00000396212 SIN3AQ96ST3 1273 aa18.6■□□□□ 0.57
CCP110-203ENST00000396212 RGS3P49796 1198 aa18.6■□□□□ 0.57
CCP110-203ENST00000396212 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
CCP110-203ENST00000396212 MTUS2Q5JR59 1369 aa18.59■□□□□ 0.57
CCP110-203ENST00000396212 DNTTIP2Q5QJE6 756 aaKnown RBP18.58■□□□□ 0.56
CCP110-203ENST00000396212 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.57■□□□□ 0.56
CCP110-203ENST00000396212 TPRNQ4KMQ1 711 aa18.57■□□□□ 0.56
CCP110-203ENST00000396212 GOLGA3Q08378 1498 aa18.56■□□□□ 0.56
CCP110-203ENST00000396212 ARID4BQ4LE39 1312 aaPredicted RBP18.47■□□□□ 0.55
CCP110-203ENST00000396212 STAG3Q9UJ98 1225 aa18.46■□□□□ 0.55
CCP110-203ENST00000396212 TNIKQ9UKE5 1360 aa18.44■□□□□ 0.54
CCP110-203ENST00000396212 TSPY4P0CV99 314 aa18.43■□□□□ 0.54
CCP110-203ENST00000396212 TSPY10P0CW01 314 aa18.43■□□□□ 0.54
CCP110-203ENST00000396212 FTSJ3Q8IY81 847 aaKnown RBP18.42■□□□□ 0.54
CCP110-203ENST00000396212 SPRYD3Q8NCJ5 442 aa18.42■□□□□ 0.54
CCP110-203ENST00000396212 RGL3Q3MIN7 710 aa18.41■□□□□ 0.54
CCP110-203ENST00000396212 CCER2I3L3R5 266 aa18.4■□□□□ 0.54
CCP110-203ENST00000396212 NEUROD2Q15784 382 aa18.4■□□□□ 0.54
CCP110-203ENST00000396212 FRAT1Q92837 279 aaPredicted RBP18.4■□□□□ 0.54
CCP110-203ENST00000396212 CARD11Q9BXL7 1154 aa18.39■□□□□ 0.54
CCP110-203ENST00000396212 HSP90AB1P08238 724 aaKnown RBP18.39■□□□□ 0.53
CCP110-203ENST00000396212 PLCB2Q00722 1185 aa18.39■□□□□ 0.53
CCP110-203ENST00000396212 L1TD1Q5T7N2 865 aaKnown RBP18.39■□□□□ 0.53
CCP110-203ENST00000396212 SENP3Q9H4L4 574 aaPredicted RBP18.39■□□□□ 0.53
CCP110-203ENST00000396212 EEA1Q15075 1411 aa18.38■□□□□ 0.53
CCP110-203ENST00000396212 KNSTRNQ9Y448 316 aa18.37■□□□□ 0.53
CCP110-203ENST00000396212 CC2D1BQ5T0F9 858 aaKnown RBP18.35■□□□□ 0.53
CCP110-203ENST00000396212 RSF1Q96T23 1441 aaPredicted RBP18.35■□□□□ 0.53
CCP110-203ENST00000396212 CASC1Q6TDU7 716 aa18.35■□□□□ 0.53
CCP110-203ENST00000396212 AMER1Q5JTC6 1135 aaPredicted RBP18.33■□□□□ 0.53
CCP110-203ENST00000396212 CDK11BP21127 795 aaKnown RBP18.32■□□□□ 0.52
CCP110-203ENST00000396212 MSNP26038 577 aaKnown RBP18.31■□□□□ 0.52
CCP110-203ENST00000396212 HSCBQ8IWL3 235 aa18.29■□□□□ 0.52
CCP110-203ENST00000396212 ARID3AQ99856 593 aa18.29■□□□□ 0.52
CCP110-203ENST00000396212 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
CCP110-203ENST00000396212 ZBTB7CA1YPR0 619 aa18.28■□□□□ 0.52
CCP110-203ENST00000396212 CFAP53Q96M91 514 aa18.28■□□□□ 0.52
CCP110-203ENST00000396212 ESF1Q9H501 851 aaKnown RBP18.28■□□□□ 0.52
CCP110-203ENST00000396212 ZRSR1Q15695 479 aaKnown RBP18.27■□□□□ 0.52
CCP110-203ENST00000396212 GZF1Q9H116 711 aaPredicted RBP18.27■□□□□ 0.52
CCP110-203ENST00000396212 CEP164Q9UPV0 1460 aa18.27■□□□□ 0.52
CCP110-203ENST00000396212 IPO9Q96P70 1041 aaKnown RBP18.27■□□□□ 0.52
CCP110-203ENST00000396212 HSPA5P11021 654 aaKnown RBP18.25■□□□□ 0.51
CCP110-203ENST00000396212 CCNB3Q8WWL7 1395 aa18.24■□□□□ 0.51
CCP110-203ENST00000396212 SLKQ9H2G2 1235 aaPredicted RBP18.22■□□□□ 0.51
CCP110-203ENST00000396212 WRNQ14191 1432 aaPredicted RBP eCLIP18.22■□□□□ 0.51
CCP110-203ENST00000396212 PNNQ9H307 717 aaKnown RBP18.22■□□□□ 0.51
CCP110-203ENST00000396212 CDCA8Q53HL2 280 aa18.2■□□□□ 0.5
CCP110-203ENST00000396212 TCERG1O14776 1098 aaKnown RBP18.19■□□□□ 0.5
CCP110-203ENST00000396212 CHAF1AQ13111 956 aaPredicted RBP18.18■□□□□ 0.5
CCP110-203ENST00000396212 MAPK8IP3Q9UPT6 1336 aa18.18■□□□□ 0.5
CCP110-203ENST00000396212 KCNH8Q96L42 1107 aa18.17■□□□□ 0.5
CCP110-203ENST00000396212 RCAN3Q9UKA8 241 aa18.15■□□□□ 0.5
CCP110-203ENST00000396212 PLEKHG5O94827 1062 aa18.14■□□□□ 0.49
CCP110-203ENST00000396212 TAOK2Q9UL54 1235 aa18.14■□□□□ 0.49
CCP110-203ENST00000396212 SETD5Q9C0A6 1442 aa18.13■□□□□ 0.49
CCP110-203ENST00000396212 TIMELESSQ9UNS1 1208 aa18.13■□□□□ 0.49
CCP110-203ENST00000396212 GOLGA6L3A6NEY3 463 aa18.12■□□□□ 0.49
CCP110-203ENST00000396212 GOLGA6L6A8MZA4 724 aa18.12■□□□□ 0.49
CCP110-203ENST00000396212 CFDP1Q9UEE9 299 aaPredicted RBP18.11■□□□□ 0.49
CCP110-203ENST00000396212 SOGA1O94964 1423 aa18.11■□□□□ 0.49
CCP110-203ENST00000396212 MS4A1P11836 297 aa18.1■□□□□ 0.49
CCP110-203ENST00000396212 DRC7Q8IY82 874 aa18.09■□□□□ 0.49
CCP110-203ENST00000396212 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
CCP110-203ENST00000396212 NUDCQ9Y266 331 aa18.08■□□□□ 0.48
CCP110-203ENST00000396212 DCAF11Q8TEB1 546 aa18.07■□□□□ 0.48
CCP110-203ENST00000396212 GBP4Q96PP9 640 aa18.07■□□□□ 0.48
CCP110-203ENST00000396212 KANK4Q5T7N3 995 aaPredicted RBP18.06■□□□□ 0.48
CCP110-203ENST00000396212 C14orf37Q86TY3 774 aa18.06■□□□□ 0.48
CCP110-203ENST00000396212 RB1CC1Q8TDY2 1594 aa18.06■□□□□ 0.48
CCP110-203ENST00000396212 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
CCP110-203ENST00000396212 FOXD1Q16676 465 aa18.05■□□□□ 0.48
CCP110-203ENST00000396212 TMF1P82094 1093 aa18.04■□□□□ 0.48
CCP110-203ENST00000396212 PLEKHD1A6NEE1 506 aa18.04■□□□□ 0.48
CCP110-203ENST00000396212 CHMP4BQ9H444 224 aaKnown RBP18.04■□□□□ 0.48
CCP110-203ENST00000396212 GOLGA6L4A6NEF3 574 aa18.04■□□□□ 0.48
CCP110-203ENST00000396212 RAB3GAP2Q9H2M9 1393 aa18.04■□□□□ 0.48
CCP110-203ENST00000396212 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
CCP110-203ENST00000396212 SLC4A3P48751 1232 aa18.03■□□□□ 0.48
CCP110-203ENST00000396212 NPM1P06748 294 aaKnown RBP eCLIP18.03■□□□□ 0.48
CCP110-203ENST00000396212 HSP90AA2PQ14568 343 aaPredicted RBP18.03■□□□□ 0.48
CCP110-203ENST00000396212 KTN1Q86UP2 1357 aaKnown RBP18.02■□□□□ 0.47
CCP110-203ENST00000396212 RSPH6AQ9H0K4 717 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms