RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 FHAD1B1AJZ9 1412 aa25.75■■□□□ 1.71
PFDN6-204ENST00000395131 NPM1P06748 294 aaKnown RBP eCLIP25.73■■□□□ 1.71
PFDN6-204ENST00000395131 JPH4Q96JJ6 628 aa25.69■■□□□ 1.7
PFDN6-204ENST00000395131 TSPOAP1O95153 1857 aa25.67■■□□□ 1.7
PFDN6-204ENST00000395131 ADCY10Q96PN6 1610 aa25.65■■□□□ 1.7
PFDN6-204ENST00000395131 ERICH3Q5RHP9 1530 aa25.62■■□□□ 1.69
PFDN6-204ENST00000395131 WRNQ14191 1432 aaPredicted RBP eCLIP25.62■■□□□ 1.69
PFDN6-204ENST00000395131 ADGRL1O94910 1474 aa25.58■■□□□ 1.69
PFDN6-204ENST00000395131 HECW2Q9P2P5 1572 aa25.57■■□□□ 1.68
PFDN6-204ENST00000395131 RUSC2Q8N2Y8 1516 aa25.53■■□□□ 1.68
PFDN6-204ENST00000395131 BIVM-ERCC5R4GMW8 1640 aa25.46■■□□□ 1.67
PFDN6-204ENST00000395131 TOP2BQ02880 1626 aa25.45■■□□□ 1.66
PFDN6-204ENST00000395131 PPRC1Q5VV67 1664 aaKnown RBP25.44■■□□□ 1.66
PFDN6-204ENST00000395131 FBXO41Q8TF61 875 aa25.4■■□□□ 1.66
PFDN6-204ENST00000395131 GLI2P10070 1586 aa25.39■■□□□ 1.66
PFDN6-204ENST00000395131 COL17A1Q9UMD9 1497 aaPredicted RBP25.32■■□□□ 1.64
PFDN6-204ENST00000395131 KIAA0586Q9BVV6 1533 aa25.31■■□□□ 1.64
PFDN6-204ENST00000395131 PLB1Q6P1J6 1458 aa25.28■■□□□ 1.64
PFDN6-204ENST00000395131 ABCC2Q92887 1545 aa25.27■■□□□ 1.64
PFDN6-204ENST00000395131 ASXL2Q76L83 1435 aa25.26■■□□□ 1.63
PFDN6-204ENST00000395131 PTPRGP23470 1445 aa25.23■■□□□ 1.63
PFDN6-204ENST00000395131 MAP3K4Q9Y6R4 1608 aa25.2■■□□□ 1.62
PFDN6-204ENST00000395131 TEX14Q8IWB6 1497 aa25.16■■□□□ 1.62
PFDN6-204ENST00000395131 CUL7Q14999 1698 aa25.15■■□□□ 1.62
PFDN6-204ENST00000395131 UHRF1BP1LA0JNW5 1464 aa25.15■■□□□ 1.62
PFDN6-204ENST00000395131 EPRSP07814 1512 aaKnown RBP25.12■■□□□ 1.61
PFDN6-204ENST00000395131 TNIKQ9UKE5 1360 aa25.12■■□□□ 1.61
PFDN6-204ENST00000395131 CARMIL2Q6F5E8 1435 aa25.05■■□□□ 1.6
PFDN6-204ENST00000395131 KDM5BQ9UGL1 1544 aa25.03■■□□□ 1.6
PFDN6-204ENST00000395131 IGF1RP08069 1367 aa25.03■■□□□ 1.6
PFDN6-204ENST00000395131 UACAQ9BZF9 1416 aa25.03■■□□□ 1.6
PFDN6-204ENST00000395131 TTBK1Q5TCY1 1321 aaPredicted RBP24.99■■□□□ 1.59
PFDN6-204ENST00000395131 LMTK3Q96Q04 1460 aa24.97■■□□□ 1.59
PFDN6-204ENST00000395131 ZCCHC11Q5TAX3 1644 aaKnown RBP24.94■■□□□ 1.58
PFDN6-204ENST00000395131 MAGI3Q5TCQ9 1506 aa24.89■■□□□ 1.57
PFDN6-204ENST00000395131 KIF21BO75037 1637 aa24.89■■□□□ 1.57
PFDN6-204ENST00000395131 IQGAP2Q13576 1575 aa24.88■■□□□ 1.57
PFDN6-204ENST00000395131 KIF27Q86VH2 1401 aa24.87■■□□□ 1.57
PFDN6-204ENST00000395131 DISP1Q96F81 1524 aa24.87■■□□□ 1.57
PFDN6-204ENST00000395131 CFAP43Q8NDM7 1665 aa24.85■■□□□ 1.57
PFDN6-204ENST00000395131 WDR7Q9Y4E6 1490 aa24.84■■□□□ 1.57
PFDN6-204ENST00000395131 PTPRMP28827 1452 aa24.83■■□□□ 1.57
PFDN6-204ENST00000395131 ADAMTSL3P82987 1691 aa24.83■■□□□ 1.57
PFDN6-204ENST00000395131 CARMIL1Q5VZK9 1371 aa24.8■■□□□ 1.56
PFDN6-204ENST00000395131 CD109Q6YHK3 1445 aa24.8■■□□□ 1.56
PFDN6-204ENST00000395131 SOCS7O14512 581 aa24.79■■□□□ 1.56
PFDN6-204ENST00000395131 PCF11O94913 1555 aaKnown RBP24.76■■□□□ 1.55
PFDN6-204ENST00000395131 ARAP3Q8WWN8 1544 aa24.74■■□□□ 1.55
PFDN6-204ENST00000395131 UGGT2Q9NYU1 1516 aa24.72■■□□□ 1.55
PFDN6-204ENST00000395131 ILDR2Q71H61 639 aa24.71■■□□□ 1.55
PFDN6-204ENST00000395131 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
PFDN6-204ENST00000395131 KIAA0556O60303 1618 aa24.68■■□□□ 1.54
PFDN6-204ENST00000395131 BCORL1Q5H9F3 1711 aa24.64■■□□□ 1.54
PFDN6-204ENST00000395131 CERKQ8TCT0 537 aa24.63■■□□□ 1.53
PFDN6-204ENST00000395131 KCNH8Q96L42 1107 aa24.62■■□□□ 1.53
PFDN6-204ENST00000395131 DISP3Q9P2K9 1392 aa24.61■■□□□ 1.53
PFDN6-204ENST00000395131 PHLDB1Q86UU1 1377 aa24.59■■□□□ 1.53
PFDN6-204ENST00000395131 MADDQ8WXG6 1647 aa24.59■■□□□ 1.53
PFDN6-204ENST00000395131 ABCA8O94911 1581 aa24.55■■□□□ 1.52
PFDN6-204ENST00000395131 HSPA2P54652 639 aa24.48■■□□□ 1.51
PFDN6-204ENST00000395131 RAPGEF2Q9Y4G8 1499 aa24.48■■□□□ 1.51
PFDN6-204ENST00000395131 RIMS1Q86UR5 1692 aaKnown RBP24.47■■□□□ 1.51
PFDN6-204ENST00000395131 RAPGEF3O95398 923 aa24.46■■□□□ 1.51
PFDN6-204ENST00000395131 ABCA9Q8IUA7 1624 aa24.45■■□□□ 1.5
PFDN6-204ENST00000395131 ARID4BQ4LE39 1312 aaPredicted RBP24.43■■□□□ 1.5
PFDN6-204ENST00000395131 NEO1Q92859 1461 aa24.43■■□□□ 1.5
PFDN6-204ENST00000395131 FRMPD1Q5SYB0 1578 aa24.42■■□□□ 1.5
PFDN6-204ENST00000395131 GOLGA3Q08378 1498 aa24.41■■□□□ 1.5
PFDN6-204ENST00000395131 SPATA31D1Q6ZQQ2 1576 aa24.38■■□□□ 1.49
PFDN6-204ENST00000395131 CTTNBP2Q8WZ74 1663 aa24.37■■□□□ 1.49
PFDN6-204ENST00000395131 ARHGEF40Q8TER5 1519 aa24.33■■□□□ 1.49
PFDN6-204ENST00000395131 ATP10BO94823 1461 aa24.32■■□□□ 1.48
PFDN6-204ENST00000395131 POGZQ7Z3K3 1410 aa24.27■■□□□ 1.48
PFDN6-204ENST00000395131 RICTORQ6R327 1708 aa24.27■■□□□ 1.48
PFDN6-204ENST00000395131 FANCAO15360 1455 aa24.24■■□□□ 1.47
PFDN6-204ENST00000395131 DMRT2Q9Y5R5 561 aa24.23■■□□□ 1.47
PFDN6-204ENST00000395131 TTC37Q6PGP7 1564 aa24.23■■□□□ 1.47
PFDN6-204ENST00000395131 STRCQ7RTU9 1775 aa24.22■■□□□ 1.47
PFDN6-204ENST00000395131 YEATS2Q9ULM3 1422 aa24.22■■□□□ 1.47
PFDN6-204ENST00000395131 SIGLEC1Q9BZZ2 1709 aa24.21■■□□□ 1.47
PFDN6-204ENST00000395131 FHOD3Q2V2M9 1422 aa24.21■■□□□ 1.47
PFDN6-204ENST00000395131 PREX1Q8TCU6 1659 aa24.21■■□□□ 1.47
PFDN6-204ENST00000395131 DENND4BO75064 1496 aaPredicted RBP24.2■■□□□ 1.47
PFDN6-204ENST00000395131 FER1L4A9Z1Z3 1794 aa24.2■■□□□ 1.46
PFDN6-204ENST00000395131 PLPPR3Q6T4P5 718 aa24.19■■□□□ 1.46
PFDN6-204ENST00000395131 AKNAQ7Z591 1439 aa24.18■■□□□ 1.46
PFDN6-204ENST00000395131 ZMYM4Q5VZL5 1548 aa24.17■■□□□ 1.46
PFDN6-204ENST00000395131 FAM9AQ8IZU1 332 aaPredicted RBP24.17■■□□□ 1.46
PFDN6-204ENST00000395131 ARID3CA6NKF2 412 aa24.16■■□□□ 1.46
PFDN6-204ENST00000395131 EFCAB5A4FU69 1503 aa24.13■■□□□ 1.45
PFDN6-204ENST00000395131 MAGI2Q86UL8 1455 aa24.13■■□□□ 1.45
PFDN6-204ENST00000395131 ZFYVE16Q7Z3T8 1539 aa24.11■■□□□ 1.45
PFDN6-204ENST00000395131 IQSEC2Q5JU85 1478 aa24.1■■□□□ 1.45
PFDN6-204ENST00000395131 SETD1BQ9UPS6 1966 aaKnown RBP24.09■■□□□ 1.45
PFDN6-204ENST00000395131 CFAP74Q9C0B2 1584 aa24.09■■□□□ 1.45
PFDN6-204ENST00000395131 ARHGEF12Q9NZN5 1544 aa24.09■■□□□ 1.45
PFDN6-204ENST00000395131 PTPRTO14522 1441 aa24.08■■□□□ 1.44
PFDN6-204ENST00000395131 RAPGEF6Q8TEU7 1601 aa24.06■■□□□ 1.44
PFDN6-204ENST00000395131 LTBP4Q8N2S1 1624 aa24.05■■□□□ 1.44
PFDN6-204ENST00000395131 MLECQ14165 292 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms