RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 FHAD1B1AJZ9 1412 aa29.49■■■□□ 2.31
CLDND1-203ENST00000394181 APLP2Q06481 763 aa29.49■■■□□ 2.31
CLDND1-203ENST00000394181 EIF4G3O43432 1585 aaKnown RBP29.46■■■□□ 2.31
CLDND1-203ENST00000394181 CTTNBP2Q8WZ74 1663 aa29.45■■■□□ 2.31
CLDND1-203ENST00000394181 ADAMTS12P58397 1594 aa29.45■■■□□ 2.31
CLDND1-203ENST00000394181 HRCP23327 699 aa29.42■■■□□ 2.3
CLDND1-203ENST00000394181 SNAPC4Q5SXM2 1469 aa29.39■■■□□ 2.3
CLDND1-203ENST00000394181 FHOD3Q2V2M9 1422 aa29.38■■■□□ 2.29
CLDND1-203ENST00000394181 KANK4Q5T7N3 995 aaPredicted RBP29.37■■■□□ 2.29
CLDND1-203ENST00000394181 EFCAB5A4FU69 1503 aa29.3■■■□□ 2.28
CLDND1-203ENST00000394181 SAMD9Q5K651 1589 aa29.22■■■□□ 2.27
CLDND1-203ENST00000394181 MAGI1Q96QZ7 1491 aaPredicted RBP29.21■■■□□ 2.27
CLDND1-203ENST00000394181 ATP1B4Q9UN42 357 aaPredicted RBP29.21■■■□□ 2.27
CLDND1-203ENST00000394181 GRIN2AQ12879 1464 aa29.21■■■□□ 2.27
CLDND1-203ENST00000394181 FBLN2P98095 1184 aa29.2■■■□□ 2.26
CLDND1-203ENST00000394181 CHMP7Q8WUX9 453 aaPredicted RBP29.2■■■□□ 2.26
CLDND1-203ENST00000394181 PCF11O94913 1555 aaKnown RBP29.19■■■□□ 2.26
CLDND1-203ENST00000394181 IQGAP2Q13576 1575 aa29.18■■■□□ 2.26
CLDND1-203ENST00000394181 SYNJ2O15056 1496 aa29.15■■■□□ 2.26
CLDND1-203ENST00000394181 TIAM1Q13009 1591 aa29.11■■■□□ 2.25
CLDND1-203ENST00000394181 CASKIN1Q8WXD9 1431 aa29.11■■■□□ 2.25
CLDND1-203ENST00000394181 FMN1Q68DA7 1419 aa29.1■■■□□ 2.25
CLDND1-203ENST00000394181 KIAA0586Q9BVV6 1533 aa29.1■■■□□ 2.25
CLDND1-203ENST00000394181 MAP3K1Q13233 1512 aa29.07■■■□□ 2.24
CLDND1-203ENST00000394181 FYCO1Q9BQS8 1478 aa29.07■■■□□ 2.24
CLDND1-203ENST00000394181 CEP170Q5SW79 1584 aa29.05■■■□□ 2.24
CLDND1-203ENST00000394181 HNRNPUL2Q1KMD3 747 aaKnown RBP29.05■■■□□ 2.24
CLDND1-203ENST00000394181 UGGT2Q9NYU1 1516 aa29.03■■■□□ 2.24
CLDND1-203ENST00000394181 LRRC9Q6ZRR7 1453 aa29.03■■■□□ 2.24
CLDND1-203ENST00000394181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.02■■■□□ 2.24
CLDND1-203ENST00000394181 CFAP43Q8NDM7 1665 aa28.97■■■□□ 2.23
CLDND1-203ENST00000394181 DISP1Q96F81 1524 aa28.97■■■□□ 2.23
CLDND1-203ENST00000394181 NUP160Q12769 1436 aa28.96■■■□□ 2.23
CLDND1-203ENST00000394181 LRRIQ1Q96JM4 1722 aa28.9■■■□□ 2.22
CLDND1-203ENST00000394181 RRBP1Q9P2E9 1410 aaKnown RBP28.89■■■□□ 2.22
CLDND1-203ENST00000394181 KIAA0556O60303 1618 aa28.89■■■□□ 2.22
CLDND1-203ENST00000394181 JPH4Q96JJ6 628 aa28.88■■■□□ 2.21
CLDND1-203ENST00000394181 PHLDB1Q86UU1 1377 aa28.87■■■□□ 2.21
CLDND1-203ENST00000394181 CCER1Q8TC90 406 aaPredicted RBP28.85■■■□□ 2.21
CLDND1-203ENST00000394181 CCNB3Q8WWL7 1395 aa28.83■■■□□ 2.21
CLDND1-203ENST00000394181 ARID3CA6NKF2 412 aa28.83■■■□□ 2.21
CLDND1-203ENST00000394181 MTUS2Q5JR59 1369 aa28.78■■■□□ 2.2
CLDND1-203ENST00000394181 ZEB1P37275 1124 aaPredicted RBP28.77■■■□□ 2.2
CLDND1-203ENST00000394181 CHD1O14646 1710 aa28.77■■■□□ 2.2
CLDND1-203ENST00000394181 HECW1Q76N89 1606 aa28.74■■■□□ 2.19
CLDND1-203ENST00000394181 ITGAEP38570 1179 aa28.74■■■□□ 2.19
CLDND1-203ENST00000394181 EPRSP07814 1512 aaKnown RBP28.74■■■□□ 2.19
CLDND1-203ENST00000394181 MAGI3Q5TCQ9 1506 aa28.73■■■□□ 2.19
CLDND1-203ENST00000394181 CDK13Q14004 1512 aaKnown RBP28.72■■■□□ 2.19
CLDND1-203ENST00000394181 CARMIL2Q6F5E8 1435 aa28.7■■■□□ 2.19
CLDND1-203ENST00000394181 CCDC18Q5T9S5 1454 aa28.7■■■□□ 2.18
CLDND1-203ENST00000394181 FAM50AQ14320 339 aaKnown RBP28.67■■■□□ 2.18
CLDND1-203ENST00000394181 NUP153P49790 1475 aaKnown RBP28.66■■■□□ 2.18
CLDND1-203ENST00000394181 PLB1Q6P1J6 1458 aa28.66■■■□□ 2.18
CLDND1-203ENST00000394181 PRG4Q92954 1404 aaPredicted RBP28.64■■■□□ 2.17
CLDND1-203ENST00000394181 RAPGEF6Q8TEU7 1601 aa28.63■■■□□ 2.17
CLDND1-203ENST00000394181 NCOA2Q15596 1464 aa28.63■■■□□ 2.17
CLDND1-203ENST00000394181 EHBP1L1Q8N3D4 1523 aa28.61■■■□□ 2.17
CLDND1-203ENST00000394181 FGD6Q6ZV73 1430 aa28.56■■■□□ 2.16
CLDND1-203ENST00000394181 SUPT6HQ7KZ85 1726 aaKnown RBP28.55■■■□□ 2.16
CLDND1-203ENST00000394181 ARHGEF11O15085 1522 aa28.52■■■□□ 2.16
CLDND1-203ENST00000394181 MYOM3Q5VTT5 1437 aa28.51■■■□□ 2.15
CLDND1-203ENST00000394181 SHROOM2Q13796 1616 aa28.48■■■□□ 2.15
CLDND1-203ENST00000394181 ERCC6L2Q5T890 1561 aa28.48■■■□□ 2.15
CLDND1-203ENST00000394181 PTPRGP23470 1445 aa28.48■■■□□ 2.15
CLDND1-203ENST00000394181 ABCA8O94911 1581 aa28.46■■■□□ 2.15
CLDND1-203ENST00000394181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.45■■■□□ 2.14
CLDND1-203ENST00000394181 CLASP1Q7Z460 1538 aa28.42■■■□□ 2.14
CLDND1-203ENST00000394181 CDK11AQ9UQ88 783 aaPredicted RBP28.41■■■□□ 2.14
CLDND1-203ENST00000394181 ATP10BO94823 1461 aa28.38■■■□□ 2.13
CLDND1-203ENST00000394181 PTPRKQ15262 1439 aa28.38■■■□□ 2.13
CLDND1-203ENST00000394181 RAB3GAP2Q9H2M9 1393 aa28.37■■■□□ 2.13
CLDND1-203ENST00000394181 DHX57Q6P158 1386 aaKnown RBP28.37■■■□□ 2.13
CLDND1-203ENST00000394181 PTPN23Q9H3S7 1636 aa28.35■■■□□ 2.13
CLDND1-203ENST00000394181 TROQ12816 1431 aaPredicted RBP28.34■■■□□ 2.13
CLDND1-203ENST00000394181 SETD5Q9C0A6 1442 aa28.34■■■□□ 2.13
CLDND1-203ENST00000394181 UACAQ9BZF9 1416 aa28.28■■■□□ 2.12
CLDND1-203ENST00000394181 TCOF1Q13428 1488 aaKnown RBP28.28■■■□□ 2.12
CLDND1-203ENST00000394181 PLEKHD1A6NEE1 506 aa28.27■■■□□ 2.12
CLDND1-203ENST00000394181 MIA2Q96PC5 1412 aa28.27■■■□□ 2.12
CLDND1-203ENST00000394181 KIF14Q15058 1648 aa28.26■■■□□ 2.12
CLDND1-203ENST00000394181 ZNF644Q9H582 1327 aaPredicted RBP28.26■■■□□ 2.11
CLDND1-203ENST00000394181 CHIC2Q9UKJ5 165 aa28.2■■■□□ 2.11
CLDND1-203ENST00000394181 GPATCH8Q9UKJ3 1502 aaKnown RBP28.18■■■□□ 2.1
CLDND1-203ENST00000394181 ADCY10Q96PN6 1610 aa28.17■■■□□ 2.1
CLDND1-203ENST00000394181 CFDP1Q9UEE9 299 aaPredicted RBP28.15■■■□□ 2.1
CLDND1-203ENST00000394181 ABCC2Q92887 1545 aa28.14■■■□□ 2.1
CLDND1-203ENST00000394181 OSCARQ8IYS5 282 aa28.14■■■□□ 2.09
CLDND1-203ENST00000394181 HFM1A2PYH4 1435 aa28.13■■■□□ 2.09
CLDND1-203ENST00000394181 RRP7BPQ9NSQ0 103 aa28.13■■■□□ 2.09
CLDND1-203ENST00000394181 CLSPNQ9HAW4 1339 aa28.13■■■□□ 2.09
CLDND1-203ENST00000394181 NAIPQ13075 1403 aa28.12■■■□□ 2.09
CLDND1-203ENST00000394181 ABCC10Q5T3U5 1492 aa28.11■■■□□ 2.09
CLDND1-203ENST00000394181 ZNF777Q9ULD5 760 aaPredicted RBP28.11■■■□□ 2.09
CLDND1-203ENST00000394181 ABCC5O15440 1437 aa28.06■■■□□ 2.08
CLDND1-203ENST00000394181 MAPKBP1O60336 1514 aa28.06■■■□□ 2.08
CLDND1-203ENST00000394181 DAPK1P53355 1430 aa28.06■■■□□ 2.08
CLDND1-203ENST00000394181 CAMSAP2Q08AD1 1489 aa28.05■■■□□ 2.08
CLDND1-203ENST00000394181 ITSN2Q9NZM3 1697 aa28.03■■■□□ 2.08
CLDND1-203ENST00000394181 CDC42BPAQ5VT25 1732 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms