RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 ERCC6Q03468 1493 aa12.55□□□□□ -0.4
CDH11-202ENST00000394156 A0A0G2JS52 829 aa12.54□□□□□ -0.4
CDH11-202ENST00000394156 MROH2BQ7Z745 1585 aa12.53□□□□□ -0.4
CDH11-202ENST00000394156 WRNQ14191 1432 aaPredicted RBP eCLIP12.52□□□□□ -0.41
CDH11-202ENST00000394156 NACADO15069 1562 aa12.52□□□□□ -0.41
CDH11-202ENST00000394156 FOXD1Q16676 465 aa12.51□□□□□ -0.41
CDH11-202ENST00000394156 C14orf37Q86TY3 774 aa12.48□□□□□ -0.41
CDH11-202ENST00000394156 ARID4BQ4LE39 1312 aaPredicted RBP12.46□□□□□ -0.41
CDH11-202ENST00000394156 RTL5Q5HYW3 569 aaPredicted RBP12.45□□□□□ -0.42
CDH11-202ENST00000394156 GOLGA3Q08378 1498 aa12.45□□□□□ -0.42
CDH11-202ENST00000394156 TSPY4P0CV99 314 aa12.45□□□□□ -0.42
CDH11-202ENST00000394156 TSPY10P0CW01 314 aa12.45□□□□□ -0.42
CDH11-202ENST00000394156 TNNT2P45379 298 aaPredicted RBP12.45□□□□□ -0.42
CDH11-202ENST00000394156 MLECQ14165 292 aa12.45□□□□□ -0.42
CDH11-202ENST00000394156 ARXQ96QS3 562 aa12.45□□□□□ -0.42
CDH11-202ENST00000394156 TMC1Q8TDI8 760 aa12.44□□□□□ -0.42
CDH11-202ENST00000394156 CCDC88BA6NC98 1476 aa12.44□□□□□ -0.42
CDH11-202ENST00000394156 ZBTB47Q9UFB7 747 aaPredicted RBP12.43□□□□□ -0.42
CDH11-202ENST00000394156 PPM1GO15355 546 aaPredicted RBP12.42□□□□□ -0.42
CDH11-202ENST00000394156 MRS2Q9HD23 443 aa12.41□□□□□ -0.42
CDH11-202ENST00000394156 NEFMP07197 916 aa12.41□□□□□ -0.42
CDH11-202ENST00000394156 KANK4Q5T7N3 995 aaPredicted RBP12.4□□□□□ -0.42
CDH11-202ENST00000394156 NBR1Q14596 966 aa12.38□□□□□ -0.43
CDH11-202ENST00000394156 CUX2O14529 1486 aa12.38□□□□□ -0.43
CDH11-202ENST00000394156 SAFB2Q14151 953 aaKnown RBP eCLIP12.38□□□□□ -0.43
CDH11-202ENST00000394156 CFDP1Q9UEE9 299 aaPredicted RBP12.37□□□□□ -0.43
CDH11-202ENST00000394156 PLEKHD1A6NEE1 506 aa12.37□□□□□ -0.43
CDH11-202ENST00000394156 BAZ1AQ9NRL2 1556 aaPredicted RBP12.37□□□□□ -0.43
CDH11-202ENST00000394156 NEUROD2Q15784 382 aa12.36□□□□□ -0.43
CDH11-202ENST00000394156 SOX12O15370 315 aa12.36□□□□□ -0.43
CDH11-202ENST00000394156 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
CDH11-202ENST00000394156 CC2D1BQ5T0F9 858 aaKnown RBP12.35□□□□□ -0.43
CDH11-202ENST00000394156 KIF27Q86VH2 1401 aa12.35□□□□□ -0.43
CDH11-202ENST00000394156 TDRD9Q8NDG6 1382 aaKnown RBP12.33□□□□□ -0.44
CDH11-202ENST00000394156 RUSC2Q8N2Y8 1516 aa12.33□□□□□ -0.44
CDH11-202ENST00000394156 PPP1R15AO75807 674 aaPredicted RBP12.33□□□□□ -0.44
CDH11-202ENST00000394156 NUTM2DQ5VT03 806 aaPredicted RBP12.33□□□□□ -0.44
CDH11-202ENST00000394156 WDR43Q15061 677 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDH11-202ENST00000394156 LAS1LQ9Y4W2 734 aaKnown RBP12.3□□□□□ -0.44
CDH11-202ENST00000394156 TPRNQ4KMQ1 711 aa12.3□□□□□ -0.44
CDH11-202ENST00000394156 LMOD2Q6P5Q4 547 aa12.3□□□□□ -0.44
CDH11-202ENST00000394156 EIF4G2P78344 907 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDH11-202ENST00000394156 CEP164Q9UPV0 1460 aa12.28□□□□□ -0.44
CDH11-202ENST00000394156 CARMIL1Q5VZK9 1371 aa12.27□□□□□ -0.44
CDH11-202ENST00000394156 CCDC136Q96JN2 1154 aa12.27□□□□□ -0.45
CDH11-202ENST00000394156 CARD11Q9BXL7 1154 aa12.26□□□□□ -0.45
CDH11-202ENST00000394156 SUPT16HQ9Y5B9 1047 aaKnown RBP12.26□□□□□ -0.45
CDH11-202ENST00000394156 TNIKQ9UKE5 1360 aa12.25□□□□□ -0.45
CDH11-202ENST00000394156 STK26Q9P289 416 aa12.25□□□□□ -0.45
CDH11-202ENST00000394156 DCAF11Q8TEB1 546 aa12.25□□□□□ -0.45
CDH11-202ENST00000394156 ANP32AP39687 249 aaKnown RBP12.24□□□□□ -0.45
CDH11-202ENST00000394156 TAOK2Q9UL54 1235 aa12.23□□□□□ -0.45
CDH11-202ENST00000394156 GGT6Q6P531 493 aa12.22□□□□□ -0.45
CDH11-202ENST00000394156 SMARCA2P51531 1590 aa12.2□□□□□ -0.46
CDH11-202ENST00000394156 HNRNPMP52272 730 aaKnown RBP eCLIP12.19□□□□□ -0.46
CDH11-202ENST00000394156 HSP90AA1P07900 732 aaKnown RBP12.19□□□□□ -0.46
CDH11-202ENST00000394156 FHOD3Q2V2M9 1422 aa12.17□□□□□ -0.46
CDH11-202ENST00000394156 CCNB3Q8WWL7 1395 aa12.16□□□□□ -0.46
CDH11-202ENST00000394156 RAPGEF2Q9Y4G8 1499 aa12.16□□□□□ -0.46
CDH11-202ENST00000394156 HAP1P54257 671 aaPredicted RBP12.16□□□□□ -0.46
CDH11-202ENST00000394156 NUTM2FA1L443 756 aa12.15□□□□□ -0.46
CDH11-202ENST00000394156 EEA1Q15075 1411 aa12.15□□□□□ -0.47
CDH11-202ENST00000394156 SMARCA4P51532 1647 aa12.14□□□□□ -0.47
CDH11-202ENST00000394156 POGKQ9P215 609 aa12.14□□□□□ -0.47
CDH11-202ENST00000394156 U2SURPO15042 1029 aaKnown RBP12.13□□□□□ -0.47
CDH11-202ENST00000394156 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
CDH11-202ENST00000394156 FRAT1Q92837 279 aaPredicted RBP12.13□□□□□ -0.47
CDH11-202ENST00000394156 KNSTRNQ9Y448 316 aa12.12□□□□□ -0.47
CDH11-202ENST00000394156 TOP2AP11388 1531 aaKnown RBP12.12□□□□□ -0.47
CDH11-202ENST00000394156 B4GALNT3Q6L9W6 998 aa12.11□□□□□ -0.47
CDH11-202ENST00000394156 PKD2Q13563 968 aa12.11□□□□□ -0.47
CDH11-202ENST00000394156 HSPA5P11021 654 aaKnown RBP12.1□□□□□ -0.47
CDH11-202ENST00000394156 SRPK2P78362 688 aaKnown RBP12.08□□□□□ -0.48
CDH11-202ENST00000394156 ARHGAP35Q9NRY4 1499 aa12.08□□□□□ -0.48
CDH11-202ENST00000394156 RAB3GAP2Q9H2M9 1393 aa12.07□□□□□ -0.48
CDH11-202ENST00000394156 RGS3P49796 1198 aa12.07□□□□□ -0.48
CDH11-202ENST00000394156 RAD54L2Q9Y4B4 1467 aa12.06□□□□□ -0.48
CDH11-202ENST00000394156 PAK3O75914 559 aaPredicted RBP12.04□□□□□ -0.48
CDH11-202ENST00000394156 SPRYD3Q8NCJ5 442 aa12.04□□□□□ -0.48
CDH11-202ENST00000394156 SETD5Q9C0A6 1442 aa12.03□□□□□ -0.48
CDH11-202ENST00000394156 TULP1O00294 542 aaPredicted RBP12.02□□□□□ -0.48
CDH11-202ENST00000394156 MPHOSPH9Q99550 1183 aa12.02□□□□□ -0.48
CDH11-202ENST00000394156 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.02□□□□□ -0.48
CDH11-202ENST00000394156 ATAD2BQ9ULI0 1458 aa12.02□□□□□ -0.48
CDH11-202ENST00000394156 CCDC146Q8IYE0 955 aa12.02□□□□□ -0.49
CDH11-202ENST00000394156 CYB5RLQ6IPT4 315 aa12.02□□□□□ -0.49
CDH11-202ENST00000394156 VPS8Q8N3P4 1428 aa12.02□□□□□ -0.49
CDH11-202ENST00000394156 APBB1O00213 710 aa12.01□□□□□ -0.49
CDH11-202ENST00000394156 UPF2Q9HAU5 1272 aaKnown RBP12□□□□□ -0.49
CDH11-202ENST00000394156 EIF5BO60841 1220 aaKnown RBP12□□□□□ -0.49
CDH11-202ENST00000394156 FTSJ3Q8IY81 847 aaKnown RBP12□□□□□ -0.49
CDH11-202ENST00000394156 FHAD1B1AJZ9 1412 aa12□□□□□ -0.49
CDH11-202ENST00000394156 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
CDH11-202ENST00000394156 KIF3BO15066 747 aa11.99□□□□□ -0.49
CDH11-202ENST00000394156 FANCD2Q9BXW9 1451 aa11.98□□□□□ -0.49
CDH11-202ENST00000394156 NUP155O75694 1391 aa11.98□□□□□ -0.49
CDH11-202ENST00000394156 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
CDH11-202ENST00000394156 NESP48681 1621 aa11.97□□□□□ -0.49
CDH11-202ENST00000394156 ROCK2O75116 1388 aaKnown RBP11.97□□□□□ -0.49
CDH11-202ENST00000394156 ZNF644Q9H582 1327 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms