RNA–Protein interactions for RNA: ENST00000394149.7

CSF3-204, Transcript of colony stimulating factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSF3, Length 1,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3-204ENST00000394149 CTTNBP2Q8WZ74 1663 aa21.68■■□□□ 1.06
CSF3-204ENST00000394149 TRIM26Q12899 539 aaPredicted RBP21.65■■□□□ 1.06
CSF3-204ENST00000394149 PCGF6Q9BYE7 350 aa21.63■■□□□ 1.05
CSF3-204ENST00000394149 PPARGC1BQ86YN6 1023 aaKnown RBP21.62■■□□□ 1.05
CSF3-204ENST00000394149 SYNJ2O15056 1496 aa21.61■■□□□ 1.05
CSF3-204ENST00000394149 GRIN2AQ12879 1464 aa21.61■■□□□ 1.05
CSF3-204ENST00000394149 EFCAB5A4FU69 1503 aa21.6■■□□□ 1.05
CSF3-204ENST00000394149 CHMP7Q8WUX9 453 aaPredicted RBP21.59■■□□□ 1.05
CSF3-204ENST00000394149 APLP2Q06481 763 aa21.55■■□□□ 1.04
CSF3-204ENST00000394149 P3H3Q8IVL6 736 aa21.54■■□□□ 1.04
CSF3-204ENST00000394149 IQGAP2Q13576 1575 aa21.53■■□□□ 1.04
CSF3-204ENST00000394149 FBLN2P98095 1184 aa21.53■■□□□ 1.04
CSF3-204ENST00000394149 KIAA0586Q9BVV6 1533 aa21.52■■□□□ 1.04
CSF3-204ENST00000394149 FHOD3Q2V2M9 1422 aa21.5■■□□□ 1.03
CSF3-204ENST00000394149 SAMD9Q5K651 1589 aa21.5■■□□□ 1.03
CSF3-204ENST00000394149 NUP160Q12769 1436 aa21.45■■□□□ 1.03
CSF3-204ENST00000394149 UGGT2Q9NYU1 1516 aa21.45■■□□□ 1.02
CSF3-204ENST00000394149 CEP170Q5SW79 1584 aa21.44■■□□□ 1.02
CSF3-204ENST00000394149 TTBK1Q5TCY1 1321 aaPredicted RBP21.44■■□□□ 1.02
CSF3-204ENST00000394149 FMN1Q68DA7 1419 aa21.43■■□□□ 1.02
CSF3-204ENST00000394149 CASKIN1Q8WXD9 1431 aa21.38■■□□□ 1.01
CSF3-204ENST00000394149 MAP3K1Q13233 1512 aa21.37■■□□□ 1.01
CSF3-204ENST00000394149 PCF11O94913 1555 aaKnown RBP21.36■■□□□ 1.01
CSF3-204ENST00000394149 FYCO1Q9BQS8 1478 aa21.36■■□□□ 1.01
CSF3-204ENST00000394149 KANK4Q5T7N3 995 aaPredicted RBP21.36■■□□□ 1.01
CSF3-204ENST00000394149 DISP1Q96F81 1524 aa21.33■■□□□ 1.01
CSF3-204ENST00000394149 JPH4Q96JJ6 628 aa21.33■■□□□ 1.01
CSF3-204ENST00000394149 ATP1B4Q9UN42 357 aaPredicted RBP21.31■■□□□ 1
CSF3-204ENST00000394149 CHD1O14646 1710 aa21.31■■□□□ 1
CSF3-204ENST00000394149 TIAM1Q13009 1591 aa21.3■■□□□ 1
CSF3-204ENST00000394149 KIAA0556O60303 1618 aa21.3■■□□□ 1
CSF3-204ENST00000394149 CARMIL2Q6F5E8 1435 aa21.26■□□□□ 0.99
CSF3-204ENST00000394149 LRRC9Q6ZRR7 1453 aa21.24■□□□□ 0.99
CSF3-204ENST00000394149 CFAP43Q8NDM7 1665 aa21.23■□□□□ 0.99
CSF3-204ENST00000394149 PRG4Q92954 1404 aaPredicted RBP21.16■□□□□ 0.98
CSF3-204ENST00000394149 HECW1Q76N89 1606 aa21.16■□□□□ 0.98
CSF3-204ENST00000394149 CCDC18Q5T9S5 1454 aa21.15■□□□□ 0.98
CSF3-204ENST00000394149 LRRIQ1Q96JM4 1722 aa21.13■□□□□ 0.97
CSF3-204ENST00000394149 SHROOM2Q13796 1616 aa21.13■□□□□ 0.97
CSF3-204ENST00000394149 EPRSP07814 1512 aaKnown RBP21.12■□□□□ 0.97
CSF3-204ENST00000394149 CLASP1Q7Z460 1538 aa21.11■□□□□ 0.97
CSF3-204ENST00000394149 RAPGEF6Q8TEU7 1601 aa21.09■□□□□ 0.97
CSF3-204ENST00000394149 MTUS2Q5JR59 1369 aa21.09■□□□□ 0.97
CSF3-204ENST00000394149 RRBP1Q9P2E9 1410 aaKnown RBP21.09■□□□□ 0.97
CSF3-204ENST00000394149 NUP153P49790 1475 aaKnown RBP21.07■□□□□ 0.96
CSF3-204ENST00000394149 PLB1Q6P1J6 1458 aa21.06■□□□□ 0.96
CSF3-204ENST00000394149 PTPRGP23470 1445 aa21.05■□□□□ 0.96
CSF3-204ENST00000394149 PHLDB1Q86UU1 1377 aa21.05■□□□□ 0.96
CSF3-204ENST00000394149 CDK13Q14004 1512 aaKnown RBP21.04■□□□□ 0.96
CSF3-204ENST00000394149 CCNB3Q8WWL7 1395 aa21.03■□□□□ 0.96
CSF3-204ENST00000394149 EHBP1L1Q8N3D4 1523 aa21.03■□□□□ 0.96
CSF3-204ENST00000394149 ARID3CA6NKF2 412 aa21.02■□□□□ 0.95
CSF3-204ENST00000394149 ABCA8O94911 1581 aa21.01■□□□□ 0.95
CSF3-204ENST00000394149 MAGI3Q5TCQ9 1506 aa21.01■□□□□ 0.95
CSF3-204ENST00000394149 HNRNPUL2Q1KMD3 747 aaKnown RBP21■□□□□ 0.95
CSF3-204ENST00000394149 HRCP23327 699 aa20.99■□□□□ 0.95
CSF3-204ENST00000394149 ERCC6L2Q5T890 1561 aa20.98■□□□□ 0.95
CSF3-204ENST00000394149 OSCARQ8IYS5 282 aa20.97■□□□□ 0.95
CSF3-204ENST00000394149 CDK11AQ9UQ88 783 aaPredicted RBP20.97■□□□□ 0.95
CSF3-204ENST00000394149 NCOA2Q15596 1464 aa20.97■□□□□ 0.95
CSF3-204ENST00000394149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.96■□□□□ 0.95
CSF3-204ENST00000394149 SUPT6HQ7KZ85 1726 aaKnown RBP20.95■□□□□ 0.94
CSF3-204ENST00000394149 ARHGEF11O15085 1522 aa20.93■□□□□ 0.94
CSF3-204ENST00000394149 UACAQ9BZF9 1416 aa20.92■□□□□ 0.94
CSF3-204ENST00000394149 ATP10BO94823 1461 aa20.91■□□□□ 0.94
CSF3-204ENST00000394149 MYOM3Q5VTT5 1437 aa20.9■□□□□ 0.94
CSF3-204ENST00000394149 FGD6Q6ZV73 1430 aa20.9■□□□□ 0.94
CSF3-204ENST00000394149 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.89■□□□□ 0.93
CSF3-204ENST00000394149 FAM50AQ14320 339 aaKnown RBP20.88■□□□□ 0.93
CSF3-204ENST00000394149 TROQ12816 1431 aaPredicted RBP20.87■□□□□ 0.93
CSF3-204ENST00000394149 PLEKHD1A6NEE1 506 aa20.85■□□□□ 0.93
CSF3-204ENST00000394149 ABCC2Q92887 1545 aa20.83■□□□□ 0.93
CSF3-204ENST00000394149 ITGAEP38570 1179 aa20.83■□□□□ 0.92
CSF3-204ENST00000394149 UHRF1BP1LA0JNW5 1464 aa20.8■□□□□ 0.92
CSF3-204ENST00000394149 MIA2Q96PC5 1412 aa20.8■□□□□ 0.92
CSF3-204ENST00000394149 CCER1Q8TC90 406 aaPredicted RBP20.79■□□□□ 0.92
CSF3-204ENST00000394149 ZEB1P37275 1124 aaPredicted RBP20.78■□□□□ 0.92
CSF3-204ENST00000394149 ADCY10Q96PN6 1610 aa20.77■□□□□ 0.92
CSF3-204ENST00000394149 PTPN23Q9H3S7 1636 aa20.76■□□□□ 0.91
CSF3-204ENST00000394149 TCOF1Q13428 1488 aaKnown RBP20.75■□□□□ 0.91
CSF3-204ENST00000394149 KIF14Q15058 1648 aa20.73■□□□□ 0.91
CSF3-204ENST00000394149 KDM5BQ9UGL1 1544 aa20.72■□□□□ 0.91
CSF3-204ENST00000394149 GPATCH8Q9UKJ3 1502 aaKnown RBP20.7■□□□□ 0.9
CSF3-204ENST00000394149 ABCC10Q5T3U5 1492 aa20.69■□□□□ 0.9
CSF3-204ENST00000394149 CFDP1Q9UEE9 299 aaPredicted RBP20.67■□□□□ 0.9
CSF3-204ENST00000394149 PTPRKQ15262 1439 aa20.66■□□□□ 0.9
CSF3-204ENST00000394149 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
CSF3-204ENST00000394149 ZCCHC11Q5TAX3 1644 aaKnown RBP20.66■□□□□ 0.9
CSF3-204ENST00000394149 ITSN2Q9NZM3 1697 aa20.65■□□□□ 0.9
CSF3-204ENST00000394149 RAB3GAP2Q9H2M9 1393 aa20.63■□□□□ 0.89
CSF3-204ENST00000394149 ZNF644Q9H582 1327 aaPredicted RBP20.63■□□□□ 0.89
CSF3-204ENST00000394149 CDC42BPAQ5VT25 1732 aa20.58■□□□□ 0.89
CSF3-204ENST00000394149 CAMSAP2Q08AD1 1489 aa20.57■□□□□ 0.88
CSF3-204ENST00000394149 HFM1A2PYH4 1435 aa20.57■□□□□ 0.88
CSF3-204ENST00000394149 KCNH8Q96L42 1107 aa20.57■□□□□ 0.88
CSF3-204ENST00000394149 DHX57Q6P158 1386 aaKnown RBP20.57■□□□□ 0.88
CSF3-204ENST00000394149 ZNF777Q9ULD5 760 aaPredicted RBP20.56■□□□□ 0.88
CSF3-204ENST00000394149 DAPK1P53355 1430 aa20.56■□□□□ 0.88
CSF3-204ENST00000394149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.55■□□□□ 0.88
CSF3-204ENST00000394149 ABCC5O15440 1437 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms