RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 FHAD1B1AJZ9 1412 aa35.78■■■■□ 3.32
RARA-204ENST00000394089 CTTNBP2Q8WZ74 1663 aa35.77■■■■□ 3.32
RARA-204ENST00000394089 ADAMTS12P58397 1594 aa35.76■■■■□ 3.32
RARA-204ENST00000394089 EIF4G3O43432 1585 aaKnown RBP35.73■■■■□ 3.31
RARA-204ENST00000394089 ZEB1P37275 1124 aaPredicted RBP35.64■■■■□ 3.3
RARA-204ENST00000394089 EFCAB5A4FU69 1503 aa35.63■■■■□ 3.29
RARA-204ENST00000394089 APLP2Q06481 763 aa35.58■■■■□ 3.29
RARA-204ENST00000394089 SNAPC4Q5SXM2 1469 aa35.58■■■■□ 3.29
RARA-204ENST00000394089 MAGI1Q96QZ7 1491 aaPredicted RBP35.53■■■■□ 3.28
RARA-204ENST00000394089 SAMD9Q5K651 1589 aa35.45■■■■□ 3.27
RARA-204ENST00000394089 TTBK1Q5TCY1 1321 aaPredicted RBP35.43■■■■□ 3.26
RARA-204ENST00000394089 GRIN2AQ12879 1464 aa35.41■■■■□ 3.26
RARA-204ENST00000394089 FHOD3Q2V2M9 1422 aa35.41■■■■□ 3.26
RARA-204ENST00000394089 SYNJ2O15056 1496 aa35.4■■■■□ 3.26
RARA-204ENST00000394089 IQGAP2Q13576 1575 aa35.39■■■■□ 3.26
RARA-204ENST00000394089 P3H3Q8IVL6 736 aa35.37■■■■□ 3.25
RARA-204ENST00000394089 MAP3K1Q13233 1512 aa35.34■■■■□ 3.25
RARA-204ENST00000394089 SCAF1Q9H7N4 1312 aaKnown RBP35.33■■■■□ 3.25
RARA-204ENST00000394089 KIAA0586Q9BVV6 1533 aa35.31■■■■□ 3.24
RARA-204ENST00000394089 FMN1Q68DA7 1419 aa35.3■■■■□ 3.24
RARA-204ENST00000394089 PCF11O94913 1555 aaKnown RBP35.29■■■■□ 3.24
RARA-204ENST00000394089 CHMP7Q8WUX9 453 aaPredicted RBP35.27■■■■□ 3.24
RARA-204ENST00000394089 UGGT2Q9NYU1 1516 aa35.26■■■■□ 3.24
RARA-204ENST00000394089 CASKIN1Q8WXD9 1431 aa35.26■■■■□ 3.24
RARA-204ENST00000394089 FYCO1Q9BQS8 1478 aa35.26■■■■□ 3.23
RARA-204ENST00000394089 TIAM1Q13009 1591 aa35.24■■■■□ 3.23
RARA-204ENST00000394089 KANK4Q5T7N3 995 aaPredicted RBP35.23■■■■□ 3.23
RARA-204ENST00000394089 CEP170Q5SW79 1584 aa35.18■■■■□ 3.22
RARA-204ENST00000394089 NUP160Q12769 1436 aa35.17■■■■□ 3.22
RARA-204ENST00000394089 MYT1Q01538 1121 aa35.16■■■■□ 3.22
RARA-204ENST00000394089 CFAP43Q8NDM7 1665 aa35.15■■■■□ 3.22
RARA-204ENST00000394089 FBLN2P98095 1184 aa35.11■■■■□ 3.21
RARA-204ENST00000394089 LRRC9Q6ZRR7 1453 aa35.08■■■■□ 3.21
RARA-204ENST00000394089 DISP1Q96F81 1524 aa35.05■■■■□ 3.2
RARA-204ENST00000394089 KIAA0556O60303 1618 aa35.04■■■■□ 3.2
RARA-204ENST00000394089 ATP1B4Q9UN42 357 aaPredicted RBP35.02■■■■□ 3.2
RARA-204ENST00000394089 RRBP1Q9P2E9 1410 aaKnown RBP34.94■■■■□ 3.18
RARA-204ENST00000394089 CHD1O14646 1710 aa34.9■■■■□ 3.18
RARA-204ENST00000394089 LRRIQ1Q96JM4 1722 aa34.9■■■■□ 3.18
RARA-204ENST00000394089 HECW1Q76N89 1606 aa34.9■■■■□ 3.18
RARA-204ENST00000394089 JPH4Q96JJ6 628 aa34.89■■■■□ 3.18
RARA-204ENST00000394089 CCDC18Q5T9S5 1454 aa34.87■■■■□ 3.17
RARA-204ENST00000394089 CARMIL2Q6F5E8 1435 aa34.85■■■■□ 3.17
RARA-204ENST00000394089 CCNB3Q8WWL7 1395 aa34.79■■■■□ 3.16
RARA-204ENST00000394089 EPRSP07814 1512 aaKnown RBP34.76■■■■□ 3.16
RARA-204ENST00000394089 PHLDB1Q86UU1 1377 aa34.76■■■■□ 3.15
RARA-204ENST00000394089 HNRNPUL2Q1KMD3 747 aaKnown RBP34.76■■■■□ 3.15
RARA-204ENST00000394089 MTUS2Q5JR59 1369 aa34.75■■■■□ 3.15
RARA-204ENST00000394089 EHBP1L1Q8N3D4 1523 aa34.73■■■■□ 3.15
RARA-204ENST00000394089 RAPGEF6Q8TEU7 1601 aa34.72■■■■□ 3.15
RARA-204ENST00000394089 ACIN1Q9UKV3 1341 aaKnown RBP34.66■■■■□ 3.14
RARA-204ENST00000394089 NUP153P49790 1475 aaKnown RBP34.65■■■■□ 3.14
RARA-204ENST00000394089 SHROOM2Q13796 1616 aa34.65■■■■□ 3.14
RARA-204ENST00000394089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.64■■■■□ 3.14
RARA-204ENST00000394089 PRG4Q92954 1404 aaPredicted RBP34.64■■■■□ 3.14
RARA-204ENST00000394089 MAGI3Q5TCQ9 1506 aa34.63■■■■□ 3.13
RARA-204ENST00000394089 CDK13Q14004 1512 aaKnown RBP34.63■■■■□ 3.13
RARA-204ENST00000394089 SUPT6HQ7KZ85 1726 aaKnown RBP34.62■■■■□ 3.13
RARA-204ENST00000394089 NCOA2Q15596 1464 aa34.59■■■■□ 3.13
RARA-204ENST00000394089 CCER1Q8TC90 406 aaPredicted RBP34.57■■■■□ 3.13
RARA-204ENST00000394089 PLB1Q6P1J6 1458 aa34.57■■■■□ 3.12
RARA-204ENST00000394089 ARHGEF11O15085 1522 aa34.57■■■■□ 3.12
RARA-204ENST00000394089 CLASP1Q7Z460 1538 aa34.55■■■■□ 3.12
RARA-204ENST00000394089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.55■■■■□ 3.12
RARA-204ENST00000394089 ABCA8O94911 1581 aa34.53■■■■□ 3.12
RARA-204ENST00000394089 FGD6Q6ZV73 1430 aa34.51■■■■□ 3.11
RARA-204ENST00000394089 MYOM3Q5VTT5 1437 aa34.48■■■■□ 3.11
RARA-204ENST00000394089 PTPRGP23470 1445 aa34.47■■■■□ 3.11
RARA-204ENST00000394089 ARID3CA6NKF2 412 aa34.45■■■■□ 3.11
RARA-204ENST00000394089 CDK11AQ9UQ88 783 aaPredicted RBP34.45■■■■□ 3.1
RARA-204ENST00000394089 FAM50AQ14320 339 aaKnown RBP34.43■■■■□ 3.1
RARA-204ENST00000394089 NEUROD1Q13562 356 aa34.37■■■■□ 3.09
RARA-204ENST00000394089 ITGAEP38570 1179 aa34.36■■■■□ 3.09
RARA-204ENST00000394089 TROQ12816 1431 aaPredicted RBP34.35■■■■□ 3.09
RARA-204ENST00000394089 ERCC6L2Q5T890 1561 aa34.34■■■■□ 3.09
RARA-204ENST00000394089 ATP10BO94823 1461 aa34.31■■■■□ 3.08
RARA-204ENST00000394089 MIA2Q96PC5 1412 aa34.3■■■■□ 3.08
RARA-204ENST00000394089 PTPN23Q9H3S7 1636 aa34.29■■■■□ 3.08
RARA-204ENST00000394089 TCOF1Q13428 1488 aaKnown RBP34.29■■■■□ 3.08
RARA-204ENST00000394089 UACAQ9BZF9 1416 aa34.29■■■■□ 3.08
RARA-204ENST00000394089 ADCY10Q96PN6 1610 aa34.26■■■■□ 3.08
RARA-204ENST00000394089 CENPBP07199 599 aaPredicted RBP34.24■■■■□ 3.07
RARA-204ENST00000394089 SETD5Q9C0A6 1442 aa34.2■■■■□ 3.07
RARA-204ENST00000394089 PLEKHD1A6NEE1 506 aa34.18■■■■□ 3.06
RARA-204ENST00000394089 ABCC2Q92887 1545 aa34.17■■■■□ 3.06
RARA-204ENST00000394089 RAB3GAP2Q9H2M9 1393 aa34.15■■■■□ 3.06
RARA-204ENST00000394089 DHX57Q6P158 1386 aaKnown RBP34.14■■■■□ 3.06
RARA-204ENST00000394089 KIF14Q15058 1648 aa34.14■■■■□ 3.06
RARA-204ENST00000394089 GTF3C3Q9Y5Q9 886 aa34.13■■■■□ 3.05
RARA-204ENST00000394089 PTPRKQ15262 1439 aa34.12■■■■□ 3.05
RARA-204ENST00000394089 UHRF1BP1LA0JNW5 1464 aa34.1■■■■□ 3.05
RARA-204ENST00000394089 CLSPNQ9HAW4 1339 aa34.1■■■■□ 3.05
RARA-204ENST00000394089 OSCARQ8IYS5 282 aa34.09■■■■□ 3.05
RARA-204ENST00000394089 ITSN2Q9NZM3 1697 aa34.09■■■■□ 3.05
RARA-204ENST00000394089 GPATCH8Q9UKJ3 1502 aaKnown RBP34.06■■■■□ 3.04
RARA-204ENST00000394089 ABCC10Q5T3U5 1492 aa34.04■■■■□ 3.04
RARA-204ENST00000394089 HFM1A2PYH4 1435 aa34.02■■■■□ 3.04
RARA-204ENST00000394089 DIEXFQ68CQ4 756 aaKnown RBP33.99■■■■□ 3.03
RARA-204ENST00000394089 CFDP1Q9UEE9 299 aaPredicted RBP33.96■■■■□ 3.03
RARA-204ENST00000394089 KDM5BQ9UGL1 1544 aa33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms