RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 RUSC2Q8N2Y8 1516 aa35.61■■■■□ 3.29
POLR2J-202ENST00000393794 ABCC10Q5T3U5 1492 aa35.56■■■■□ 3.28
POLR2J-202ENST00000393794 MAPKBP1O60336 1514 aa35.53■■■■□ 3.28
POLR2J-202ENST00000393794 FAM69CQ0P6D2 419 aa35.47■■■■□ 3.27
POLR2J-202ENST00000393794 ADCY10Q96PN6 1610 aa35.45■■■■□ 3.27
POLR2J-202ENST00000393794 DIP2BQ9P265 1576 aa35.42■■■■□ 3.26
POLR2J-202ENST00000393794 KIAA0586Q9BVV6 1533 aa35.42■■■■□ 3.26
POLR2J-202ENST00000393794 IGF1RP08069 1367 aa35.41■■■■□ 3.26
POLR2J-202ENST00000393794 NPM1P06748 294 aaKnown RBP eCLIP35.39■■■■□ 3.26
POLR2J-202ENST00000393794 KIF27Q86VH2 1401 aa35.26■■■■□ 3.24
POLR2J-202ENST00000393794 CUL7Q14999 1698 aa35.26■■■■□ 3.23
POLR2J-202ENST00000393794 KDM4FA0A1W2PPD8 638 aa35.17■■■■□ 3.22
POLR2J-202ENST00000393794 KDM6BO15054 1643 aa35.17■■■■□ 3.22
POLR2J-202ENST00000393794 PTPRGP23470 1445 aa35.14■■■■□ 3.22
POLR2J-202ENST00000393794 TSPOAP1O95153 1857 aa35.1■■■■□ 3.21
POLR2J-202ENST00000393794 CARMIL1Q5VZK9 1371 aa35.09■■■■□ 3.21
POLR2J-202ENST00000393794 TNIKQ9UKE5 1360 aa35.05■■■■□ 3.2
POLR2J-202ENST00000393794 ABCC2Q92887 1545 aa35.05■■■■□ 3.2
POLR2J-202ENST00000393794 CARMIL2Q6F5E8 1435 aa34.99■■■■□ 3.19
POLR2J-202ENST00000393794 GLI2P10070 1586 aa34.99■■■■□ 3.19
POLR2J-202ENST00000393794 UHRF1BP1LA0JNW5 1464 aa34.98■■■■□ 3.19
POLR2J-202ENST00000393794 PPRC1Q5VV67 1664 aaKnown RBP34.96■■■■□ 3.19
POLR2J-202ENST00000393794 ASXL2Q76L83 1435 aa34.96■■■■□ 3.19
POLR2J-202ENST00000393794 PLB1Q6P1J6 1458 aa34.96■■■■□ 3.19
POLR2J-202ENST00000393794 IQGAP2Q13576 1575 aa34.93■■■■□ 3.18
POLR2J-202ENST00000393794 DISP1Q96F81 1524 aa34.91■■■■□ 3.18
POLR2J-202ENST00000393794 UACAQ9BZF9 1416 aa34.88■■■■□ 3.17
POLR2J-202ENST00000393794 TTBK1Q5TCY1 1321 aaPredicted RBP34.83■■■■□ 3.17
POLR2J-202ENST00000393794 KDM5BQ9UGL1 1544 aa34.83■■■■□ 3.17
POLR2J-202ENST00000393794 COL17A1Q9UMD9 1497 aaPredicted RBP34.8■■■■□ 3.16
POLR2J-202ENST00000393794 UGGT2Q9NYU1 1516 aa34.78■■■■□ 3.16
POLR2J-202ENST00000393794 EPRSP07814 1512 aaKnown RBP34.77■■■■□ 3.16
POLR2J-202ENST00000393794 MAP3K4Q9Y6R4 1608 aa34.74■■■■□ 3.15
POLR2J-202ENST00000393794 RAPGEF2Q9Y4G8 1499 aa34.7■■■■□ 3.15
POLR2J-202ENST00000393794 ADGRL1O94910 1474 aa34.68■■■■□ 3.14
POLR2J-202ENST00000393794 ZCCHC11Q5TAX3 1644 aaKnown RBP34.66■■■■□ 3.14
POLR2J-202ENST00000393794 KIAA0556O60303 1618 aa34.65■■■■□ 3.14
POLR2J-202ENST00000393794 TEX14Q8IWB6 1497 aa34.61■■■■□ 3.13
POLR2J-202ENST00000393794 WDR7Q9Y4E6 1490 aa34.52■■■■□ 3.12
POLR2J-202ENST00000393794 ILDR1Q86SU0 546 aaPredicted RBP34.52■■■■□ 3.12
POLR2J-202ENST00000393794 MAGI3Q5TCQ9 1506 aa34.44■■■■□ 3.1
POLR2J-202ENST00000393794 ABCA8O94911 1581 aa34.42■■■■□ 3.1
POLR2J-202ENST00000393794 CTTNBP2Q8WZ74 1663 aa34.39■■■■□ 3.1
POLR2J-202ENST00000393794 GOLGA3Q08378 1498 aa34.37■■■■□ 3.09
POLR2J-202ENST00000393794 CFAP43Q8NDM7 1665 aa34.37■■■■□ 3.09
POLR2J-202ENST00000393794 CD109Q6YHK3 1445 aa34.37■■■■□ 3.09
POLR2J-202ENST00000393794 HECW2Q9P2P5 1572 aa34.36■■■■□ 3.09
POLR2J-202ENST00000393794 PRXQ9BXM0 1461 aa34.31■■■■□ 3.08
POLR2J-202ENST00000393794 KCNH8Q96L42 1107 aa34.26■■■■□ 3.08
POLR2J-202ENST00000393794 ARAP3Q8WWN8 1544 aa34.2■■■■□ 3.06
POLR2J-202ENST00000393794 ATP10BO94823 1461 aa34.14■■■■□ 3.06
POLR2J-202ENST00000393794 KIF21BO75037 1637 aa34.09■■■■□ 3.05
POLR2J-202ENST00000393794 PHLDB1Q86UU1 1377 aa34.06■■■■□ 3.04
POLR2J-202ENST00000393794 ABCA9Q8IUA7 1624 aa34.04■■■■□ 3.04
POLR2J-202ENST00000393794 SAMD9Q5K651 1589 aa33.97■■■■□ 3.03
POLR2J-202ENST00000393794 ADAMTSL3P82987 1691 aa33.96■■■■□ 3.03
POLR2J-202ENST00000393794 P3H3Q8IVL6 736 aa33.95■■■■□ 3.03
POLR2J-202ENST00000393794 ARID3CA6NKF2 412 aa33.94■■■■□ 3.02
POLR2J-202ENST00000393794 NEO1Q92859 1461 aa33.93■■■■□ 3.02
POLR2J-202ENST00000393794 PTPRMP28827 1452 aa33.9■■■■□ 3.02
POLR2J-202ENST00000393794 FAM9AQ8IZU1 332 aaPredicted RBP33.9■■■■□ 3.02
POLR2J-202ENST00000393794 RAPGEF3O95398 923 aa33.89■■■■□ 3.02
POLR2J-202ENST00000393794 RAPGEF6Q8TEU7 1601 aa33.87■■■■□ 3.01
POLR2J-202ENST00000393794 FRMPD1Q5SYB0 1578 aa33.85■■■■□ 3.01
POLR2J-202ENST00000393794 CSRNP3Q8WYN3 585 aa33.83■■■■□ 3.01
POLR2J-202ENST00000393794 NUP153P49790 1475 aaKnown RBP33.81■■■■□ 3
POLR2J-202ENST00000393794 BCORL1Q5H9F3 1711 aa33.79■■■■□ 3
POLR2J-202ENST00000393794 FBXO41Q8TF61 875 aa33.76■■■□□ 2.99
POLR2J-202ENST00000393794 MADDQ8WXG6 1647 aa33.69■■■□□ 2.98
POLR2J-202ENST00000393794 FHOD3Q2V2M9 1422 aa33.66■■■□□ 2.98
POLR2J-202ENST00000393794 RICTORQ6R327 1708 aa33.66■■■□□ 2.98
POLR2J-202ENST00000393794 PCF11O94913 1555 aaKnown RBP33.65■■■□□ 2.98
POLR2J-202ENST00000393794 LMTK3Q96Q04 1460 aa33.65■■■□□ 2.98
POLR2J-202ENST00000393794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.65■■■□□ 2.98
POLR2J-202ENST00000393794 HNRNPUL2Q1KMD3 747 aaKnown RBP33.65■■■□□ 2.98
POLR2J-202ENST00000393794 ARHGEF40Q8TER5 1519 aa33.64■■■□□ 2.98
POLR2J-202ENST00000393794 DENND4BO75064 1496 aaPredicted RBP33.63■■■□□ 2.97
POLR2J-202ENST00000393794 AKNAQ7Z591 1439 aa33.62■■■□□ 2.97
POLR2J-202ENST00000393794 PLEKHD1A6NEE1 506 aa33.61■■■□□ 2.97
POLR2J-202ENST00000393794 EEA1Q15075 1411 aa33.59■■■□□ 2.97
POLR2J-202ENST00000393794 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.58■■■□□ 2.97
POLR2J-202ENST00000393794 ARID4BQ4LE39 1312 aaPredicted RBP33.58■■■□□ 2.97
POLR2J-202ENST00000393794 FANCAO15360 1455 aa33.56■■■□□ 2.96
POLR2J-202ENST00000393794 ZMYM4Q5VZL5 1548 aa33.55■■■□□ 2.96
POLR2J-202ENST00000393794 RIMS1Q86UR5 1692 aaKnown RBP33.52■■■□□ 2.96
POLR2J-202ENST00000393794 CFAP74Q9C0B2 1584 aa33.52■■■□□ 2.96
POLR2J-202ENST00000393794 SIGLEC1Q9BZZ2 1709 aa33.5■■■□□ 2.95
POLR2J-202ENST00000393794 TTC37Q6PGP7 1564 aa33.5■■■□□ 2.95
POLR2J-202ENST00000393794 EFCAB5A4FU69 1503 aa33.48■■■□□ 2.95
POLR2J-202ENST00000393794 MAGI2Q86UL8 1455 aa33.47■■■□□ 2.95
POLR2J-202ENST00000393794 YEATS2Q9ULM3 1422 aa33.46■■■□□ 2.95
POLR2J-202ENST00000393794 RANGAP1P46060 587 aaPredicted RBP33.45■■■□□ 2.95
POLR2J-202ENST00000393794 POGZQ7Z3K3 1410 aa33.43■■■□□ 2.94
POLR2J-202ENST00000393794 ZFYVE16Q7Z3T8 1539 aa33.43■■■□□ 2.94
POLR2J-202ENST00000393794 HECW1Q76N89 1606 aa33.39■■■□□ 2.94
POLR2J-202ENST00000393794 PLCH2O75038 1416 aa33.39■■■□□ 2.94
POLR2J-202ENST00000393794 HSPA2P54652 639 aa33.36■■■□□ 2.93
POLR2J-202ENST00000393794 CDK13Q14004 1512 aaKnown RBP33.36■■■□□ 2.93
POLR2J-202ENST00000393794 SCAPERQ9BY12 1400 aa33.34■■■□□ 2.93
POLR2J-202ENST00000393794 ARHGEF12Q9NZN5 1544 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms