RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 KANK4Q5T7N3 995 aaPredicted RBP16.77■□□□□ 0.28
CASP3-202ENST00000393585 WDR62O43379 1518 aa16.76■□□□□ 0.27
CASP3-202ENST00000393585 ZEB1P37275 1124 aaPredicted RBP16.76■□□□□ 0.27
CASP3-202ENST00000393585 CTTNBP2Q8WZ74 1663 aa16.76■□□□□ 0.27
CASP3-202ENST00000393585 PBRM1Q86U86 1689 aa16.73■□□□□ 0.27
CASP3-202ENST00000393585 FHOD3Q2V2M9 1422 aa16.71■□□□□ 0.27
CASP3-202ENST00000393585 ZNF608Q9ULD9 1512 aaPredicted RBP16.71■□□□□ 0.27
CASP3-202ENST00000393585 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
CASP3-202ENST00000393585 CCER1Q8TC90 406 aaPredicted RBP16.71■□□□□ 0.27
CASP3-202ENST00000393585 IFT140Q96RY7 1462 aa16.7■□□□□ 0.26
CASP3-202ENST00000393585 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
CASP3-202ENST00000393585 EFCAB5A4FU69 1503 aa16.67■□□□□ 0.26
CASP3-202ENST00000393585 FHAD1B1AJZ9 1412 aa16.66■□□□□ 0.26
CASP3-202ENST00000393585 GRIN2BQ13224 1484 aa16.66■□□□□ 0.26
CASP3-202ENST00000393585 PCF11O94913 1555 aaKnown RBP16.66■□□□□ 0.26
CASP3-202ENST00000393585 ADAMTS12P58397 1594 aa16.65■□□□□ 0.26
CASP3-202ENST00000393585 ATP1B4Q9UN42 357 aaPredicted RBP16.65■□□□□ 0.26
CASP3-202ENST00000393585 TIAM1Q13009 1591 aa16.64■□□□□ 0.25
CASP3-202ENST00000393585 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
CASP3-202ENST00000393585 SAMD9Q5K651 1589 aa16.59■□□□□ 0.25
CASP3-202ENST00000393585 MAP3K1Q13233 1512 aa16.59■□□□□ 0.25
CASP3-202ENST00000393585 SNAPC4Q5SXM2 1469 aa16.57■□□□□ 0.24
CASP3-202ENST00000393585 LRRC9Q6ZRR7 1453 aa16.57■□□□□ 0.24
CASP3-202ENST00000393585 FYCO1Q9BQS8 1478 aa16.57■□□□□ 0.24
CASP3-202ENST00000393585 FMN1Q68DA7 1419 aa16.56■□□□□ 0.24
CASP3-202ENST00000393585 CASKIN1Q8WXD9 1431 aa16.56■□□□□ 0.24
CASP3-202ENST00000393585 CFAP43Q8NDM7 1665 aa16.56■□□□□ 0.24
CASP3-202ENST00000393585 RRBP1Q9P2E9 1410 aaKnown RBP16.55■□□□□ 0.24
CASP3-202ENST00000393585 IQGAP2Q13576 1575 aa16.54■□□□□ 0.24
CASP3-202ENST00000393585 CCNB3Q8WWL7 1395 aa16.52■□□□□ 0.23
CASP3-202ENST00000393585 PHLDB1Q86UU1 1377 aa16.49■□□□□ 0.23
CASP3-202ENST00000393585 GRIN2AQ12879 1464 aa16.48■□□□□ 0.23
CASP3-202ENST00000393585 ITGAEP38570 1179 aa16.48■□□□□ 0.23
CASP3-202ENST00000393585 LRRIQ1Q96JM4 1722 aa16.46■□□□□ 0.23
CASP3-202ENST00000393585 MAGI1Q96QZ7 1491 aaPredicted RBP16.46■□□□□ 0.23
CASP3-202ENST00000393585 FBLN2P98095 1184 aa16.45■□□□□ 0.22
CASP3-202ENST00000393585 CHMP7Q8WUX9 453 aaPredicted RBP16.45■□□□□ 0.22
CASP3-202ENST00000393585 KIAA0586Q9BVV6 1533 aa16.44■□□□□ 0.22
CASP3-202ENST00000393585 UGGT2Q9NYU1 1516 aa16.43■□□□□ 0.22
CASP3-202ENST00000393585 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
CASP3-202ENST00000393585 MTUS2Q5JR59 1369 aa16.41■□□□□ 0.22
CASP3-202ENST00000393585 FAM50AQ14320 339 aaKnown RBP16.4■□□□□ 0.22
CASP3-202ENST00000393585 CEP170Q5SW79 1584 aa16.39■□□□□ 0.21
CASP3-202ENST00000393585 DISP1Q96F81 1524 aa16.38■□□□□ 0.21
CASP3-202ENST00000393585 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
CASP3-202ENST00000393585 ARID3CA6NKF2 412 aa16.36■□□□□ 0.21
CASP3-202ENST00000393585 HECW1Q76N89 1606 aa16.35■□□□□ 0.21
CASP3-202ENST00000393585 MAGI3Q5TCQ9 1506 aa16.34■□□□□ 0.21
CASP3-202ENST00000393585 FOXD1Q16676 465 aa16.33■□□□□ 0.21
CASP3-202ENST00000393585 DHX57Q6P158 1386 aaKnown RBP16.33■□□□□ 0.2
CASP3-202ENST00000393585 CCDC18Q5T9S5 1454 aa16.33■□□□□ 0.2
CASP3-202ENST00000393585 EPRSP07814 1512 aaKnown RBP16.32■□□□□ 0.2
CASP3-202ENST00000393585 CDK13Q14004 1512 aaKnown RBP16.32■□□□□ 0.2
CASP3-202ENST00000393585 NCOA2Q15596 1464 aa16.32■□□□□ 0.2
CASP3-202ENST00000393585 NUP160Q12769 1436 aa16.32■□□□□ 0.2
CASP3-202ENST00000393585 EHBP1L1Q8N3D4 1523 aa16.32■□□□□ 0.2
CASP3-202ENST00000393585 FGD6Q6ZV73 1430 aa16.31■□□□□ 0.2
CASP3-202ENST00000393585 SUPT6HQ7KZ85 1726 aaKnown RBP16.3■□□□□ 0.2
CASP3-202ENST00000393585 RAB3GAP2Q9H2M9 1393 aa16.28■□□□□ 0.2
CASP3-202ENST00000393585 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
CASP3-202ENST00000393585 JPH4Q96JJ6 628 aa16.28■□□□□ 0.2
CASP3-202ENST00000393585 MYOM3Q5VTT5 1437 aa16.26■□□□□ 0.19
CASP3-202ENST00000393585 RAPGEF6Q8TEU7 1601 aa16.25■□□□□ 0.19
CASP3-202ENST00000393585 SETD5Q9C0A6 1442 aa16.24■□□□□ 0.19
CASP3-202ENST00000393585 NUP153P49790 1475 aaKnown RBP16.24■□□□□ 0.19
CASP3-202ENST00000393585 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.24■□□□□ 0.19
CASP3-202ENST00000393585 ARHGEF11O15085 1522 aa16.23■□□□□ 0.19
CASP3-202ENST00000393585 CARMIL2Q6F5E8 1435 aa16.22■□□□□ 0.19
CASP3-202ENST00000393585 PLB1Q6P1J6 1458 aa16.22■□□□□ 0.19
CASP3-202ENST00000393585 CLSPNQ9HAW4 1339 aa16.21■□□□□ 0.19
CASP3-202ENST00000393585 CHD1O14646 1710 aa16.2■□□□□ 0.18
CASP3-202ENST00000393585 PTPRKQ15262 1439 aa16.19■□□□□ 0.18
CASP3-202ENST00000393585 PTPN23Q9H3S7 1636 aa16.19■□□□□ 0.18
CASP3-202ENST00000393585 PRG4Q92954 1404 aaPredicted RBP16.14■□□□□ 0.17
CASP3-202ENST00000393585 MAPKBP1O60336 1514 aa16.13■□□□□ 0.17
CASP3-202ENST00000393585 CDK11AQ9UQ88 783 aaPredicted RBP16.13■□□□□ 0.17
CASP3-202ENST00000393585 TCOF1Q13428 1488 aaKnown RBP16.11■□□□□ 0.17
CASP3-202ENST00000393585 ZNF316A6NFI3 1004 aaPredicted RBP16.11■□□□□ 0.17
CASP3-202ENST00000393585 MIA2Q96PC5 1412 aa16.1■□□□□ 0.17
CASP3-202ENST00000393585 HFM1A2PYH4 1435 aa16.09■□□□□ 0.17
CASP3-202ENST00000393585 CHIC2Q9UKJ5 165 aa16.09■□□□□ 0.17
CASP3-202ENST00000393585 ABCA8O94911 1581 aa16.09■□□□□ 0.17
CASP3-202ENST00000393585 TROQ12816 1431 aaPredicted RBP16.09■□□□□ 0.17
CASP3-202ENST00000393585 DIEXFQ68CQ4 756 aaKnown RBP16.07■□□□□ 0.16
CASP3-202ENST00000393585 NAIPQ13075 1403 aa16.07■□□□□ 0.16
CASP3-202ENST00000393585 PTPRGP23470 1445 aa16.06■□□□□ 0.16
CASP3-202ENST00000393585 RRP7BPQ9NSQ0 103 aa16.06■□□□□ 0.16
CASP3-202ENST00000393585 KIF14Q15058 1648 aa16.05■□□□□ 0.16
CASP3-202ENST00000393585 ZNF644Q9H582 1327 aaPredicted RBP16.05■□□□□ 0.16
CASP3-202ENST00000393585 ATP10BO94823 1461 aa16.04■□□□□ 0.16
CASP3-202ENST00000393585 SIN3AQ96ST3 1273 aa16.03■□□□□ 0.16
CASP3-202ENST00000393585 SHROOM2Q13796 1616 aa16.03■□□□□ 0.16
CASP3-202ENST00000393585 ERCC6L2Q5T890 1561 aa16.03■□□□□ 0.16
CASP3-202ENST00000393585 PLEKHD1A6NEE1 506 aa16.01■□□□□ 0.15
CASP3-202ENST00000393585 NEUROD1Q13562 356 aa16.01■□□□□ 0.15
CASP3-202ENST00000393585 ADCY10Q96PN6 1610 aa16.01■□□□□ 0.15
CASP3-202ENST00000393585 UACAQ9BZF9 1416 aa15.99■□□□□ 0.15
CASP3-202ENST00000393585 CFDP1Q9UEE9 299 aaPredicted RBP15.99■□□□□ 0.15
CASP3-202ENST00000393585 DAPK1P53355 1430 aa15.99■□□□□ 0.15
CASP3-202ENST00000393585 GPATCH8Q9UKJ3 1502 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms