RNA–Protein interactions for RNA: ENST00000393561.5

LAMB1-204, Transcript of laminin subunit beta 1, humanhuman

TSL 5 BASIC

Gene LAMB1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-204ENST00000393561 RB1CC1Q8TDY2 1594 aa15.51■□□□□ 0.07
LAMB1-204ENST00000393561 CEP162Q5TB80 1403 aa15.5■□□□□ 0.07
LAMB1-204ENST00000393561 PLEKHD1A6NEE1 506 aa15.48■□□□□ 0.07
LAMB1-204ENST00000393561 NBR1Q14596 966 aa15.48■□□□□ 0.07
LAMB1-204ENST00000393561 HIRIP3Q9BW71 556 aaPredicted RBP15.48■□□□□ 0.07
LAMB1-204ENST00000393561 IRX6P78412 446 aaPredicted RBP15.45■□□□□ 0.06
LAMB1-204ENST00000393561 PPP1R15AO75807 674 aaPredicted RBP15.43■□□□□ 0.06
LAMB1-204ENST00000393561 WRNQ14191 1432 aaPredicted RBP eCLIP15.43■□□□□ 0.06
LAMB1-204ENST00000393561 CDCA8Q53HL2 280 aa15.43■□□□□ 0.06
LAMB1-204ENST00000393561 DDRGK1Q96HY6 314 aa15.43■□□□□ 0.06
LAMB1-204ENST00000393561 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
LAMB1-204ENST00000393561 BECN1Q14457 450 aa15.41■□□□□ 0.06
LAMB1-204ENST00000393561 GLIPR1L2Q4G1C9 344 aa15.41■□□□□ 0.06
LAMB1-204ENST00000393561 KCNH8Q96L42 1107 aa15.41■□□□□ 0.06
LAMB1-204ENST00000393561 CFAP53Q96M91 514 aa15.41■□□□□ 0.06
LAMB1-204ENST00000393561 KIF27Q86VH2 1401 aa15.41■□□□□ 0.06
LAMB1-204ENST00000393561 CEP164Q9UPV0 1460 aa15.39■□□□□ 0.05
LAMB1-204ENST00000393561 TNIKQ9UKE5 1360 aa15.39■□□□□ 0.05
LAMB1-204ENST00000393561 CFDP1Q9UEE9 299 aaPredicted RBP15.38■□□□□ 0.05
LAMB1-204ENST00000393561 ARXQ96QS3 562 aa15.38■□□□□ 0.05
LAMB1-204ENST00000393561 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
LAMB1-204ENST00000393561 RGL3Q3MIN7 710 aa15.37■□□□□ 0.05
LAMB1-204ENST00000393561 KNSTRNQ9Y448 316 aa15.37■□□□□ 0.05
LAMB1-204ENST00000393561 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
LAMB1-204ENST00000393561 ANP32EQ9BTT0 268 aa15.35■□□□□ 0.05
LAMB1-204ENST00000393561 C14orf37Q86TY3 774 aa15.35■□□□□ 0.05
LAMB1-204ENST00000393561 ZBTB7CA1YPR0 619 aa15.34■□□□□ 0.05
LAMB1-204ENST00000393561 NCLP19338 710 aaKnown RBP15.34■□□□□ 0.05
LAMB1-204ENST00000393561 CARD11Q9BXL7 1154 aa15.34■□□□□ 0.05
LAMB1-204ENST00000393561 NACADO15069 1562 aa15.33■□□□□ 0.04
LAMB1-204ENST00000393561 GOLGA6L22H0YM25 854 aa15.32■□□□□ 0.04
LAMB1-204ENST00000393561 A0A0G2JS52 829 aa15.3■□□□□ 0.04
LAMB1-204ENST00000393561 SENP3Q9H4L4 574 aaPredicted RBP15.28■□□□□ 0.04
LAMB1-204ENST00000393561 CDK11BP21127 795 aaKnown RBP15.27■□□□□ 0.04
LAMB1-204ENST00000393561 CASC1Q6TDU7 716 aa15.27■□□□□ 0.03
LAMB1-204ENST00000393561 FTSJ3Q8IY81 847 aaKnown RBP15.27■□□□□ 0.03
LAMB1-204ENST00000393561 MAPK8IP3Q9UPT6 1336 aa15.25■□□□□ 0.03
LAMB1-204ENST00000393561 TRIM44Q96DX7 344 aaPredicted RBP15.25■□□□□ 0.03
LAMB1-204ENST00000393561 NUDCQ9Y266 331 aa15.25■□□□□ 0.03
LAMB1-204ENST00000393561 SUPT16HQ9Y5B9 1047 aaKnown RBP15.25■□□□□ 0.03
LAMB1-204ENST00000393561 PLEKHG5O94827 1062 aa15.23■□□□□ 0.03
LAMB1-204ENST00000393561 PPM1GO15355 546 aaPredicted RBP15.23■□□□□ 0.03
LAMB1-204ENST00000393561 FHAD1B1AJZ9 1412 aa15.22■□□□□ 0.03
LAMB1-204ENST00000393561 ARID4BQ4LE39 1312 aaPredicted RBP15.22■□□□□ 0.03
LAMB1-204ENST00000393561 PPP4R2Q9NY27 417 aa15.21■□□□□ 0.02
LAMB1-204ENST00000393561 CCNB3Q8WWL7 1395 aa15.2■□□□□ 0.02
LAMB1-204ENST00000393561 CHMP4BQ9H444 224 aaKnown RBP15.2■□□□□ 0.02
LAMB1-204ENST00000393561 HAP1P54257 671 aaPredicted RBP15.2■□□□□ 0.02
LAMB1-204ENST00000393561 SIN3AQ96ST3 1273 aa15.19■□□□□ 0.02
LAMB1-204ENST00000393561 POGKQ9P215 609 aa15.19■□□□□ 0.02
LAMB1-204ENST00000393561 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
LAMB1-204ENST00000393561 MS4A1P11836 297 aa15.18■□□□□ 0.02
LAMB1-204ENST00000393561 NEUROD2Q15784 382 aa15.18■□□□□ 0.02
LAMB1-204ENST00000393561 ZRSR1Q15695 479 aaKnown RBP15.17■□□□□ 0.02
LAMB1-204ENST00000393561 TIMELESSQ9UNS1 1208 aa15.16■□□□□ 0.02
LAMB1-204ENST00000393561 LAS1LQ9Y4W2 734 aaKnown RBP15.16■□□□□ 0.02
LAMB1-204ENST00000393561 SENP3-EIF4A1A0A087X0R7 540 aa15.16■□□□□ 0.02
LAMB1-204ENST00000393561 PNNQ9H307 717 aaKnown RBP15.16■□□□□ 0.02
LAMB1-204ENST00000393561 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
LAMB1-204ENST00000393561 TMF1P82094 1093 aa15.14■□□□□ 0.01
LAMB1-204ENST00000393561 PTMAP06454 111 aaKnown RBP15.13■□□□□ 0.01
LAMB1-204ENST00000393561 KANK1Q14678 1352 aa15.13■□□□□ 0.01
LAMB1-204ENST00000393561 CC2D1BQ5T0F9 858 aaKnown RBP15.13■□□□□ 0.01
LAMB1-204ENST00000393561 FRAT1Q92837 279 aaPredicted RBP15.12■□□□□ 0.01
LAMB1-204ENST00000393561 CARMIL1Q5VZK9 1371 aa15.11■□□□□ 0.01
LAMB1-204ENST00000393561 RGS3P49796 1198 aa15.1■□□□□ 0.01
LAMB1-204ENST00000393561 U2SURPO15042 1029 aaKnown RBP15.09■□□□□ 0.01
LAMB1-204ENST00000393561 TNNT2P45379 298 aaPredicted RBP15.09■□□□□ 0.01
LAMB1-204ENST00000393561 DCAF11Q8TEB1 546 aa15.09■□□□□ 0.01
LAMB1-204ENST00000393561 CUX2O14529 1486 aa15.08■□□□□ 0
LAMB1-204ENST00000393561 EIF4G1Q04637 1599 aaKnown RBP15.08■□□□□ 0
LAMB1-204ENST00000393561 CCER2I3L3R5 266 aa15.06■□□□□ 0
LAMB1-204ENST00000393561 ERICH6BQ5W0A0 696 aa15.05■□□□□ 0
LAMB1-204ENST00000393561 NOP58Q9Y2X3 529 aaKnown RBP15.05■□□□□ 0
LAMB1-204ENST00000393561 LMOD2Q6P5Q4 547 aa15.05■□□□□ 0
LAMB1-204ENST00000393561 SETD5Q9C0A6 1442 aa15.05■□□□□ 0
LAMB1-204ENST00000393561 HDGFP51858 240 aaKnown RBP15.05■□□□□ -0
LAMB1-204ENST00000393561 OS9Q13438 667 aaPredicted RBP15.05■□□□□ -0
LAMB1-204ENST00000393561 ARHGAP35Q9NRY4 1499 aa15.04■□□□□ -0
LAMB1-204ENST00000393561 HSP90AB1P08238 724 aaKnown RBP15.04■□□□□ -0
LAMB1-204ENST00000393561 DNTTIP2Q5QJE6 756 aaKnown RBP15.03■□□□□ -0
LAMB1-204ENST00000393561 SOGA1O94964 1423 aa15.02■□□□□ -0
LAMB1-204ENST00000393561 VPS8Q8N3P4 1428 aa15.02□□□□□ -0.01
LAMB1-204ENST00000393561 MORC1Q86VD1 984 aa15.01□□□□□ -0.01
LAMB1-204ENST00000393561 CECR2Q9BXF3 1484 aa15□□□□□ -0.01
LAMB1-204ENST00000393561 B4GALNT3Q6L9W6 998 aa15□□□□□ -0.01
LAMB1-204ENST00000393561 TPRNQ4KMQ1 711 aa15□□□□□ -0.01
LAMB1-204ENST00000393561 SRPK2P78362 688 aaKnown RBP14.99□□□□□ -0.01
LAMB1-204ENST00000393561 FGD1P98174 961 aa14.99□□□□□ -0.01
LAMB1-204ENST00000393561 HSPA5P11021 654 aaKnown RBP14.99□□□□□ -0.01
LAMB1-204ENST00000393561 KCNJ4P48050 445 aa14.99□□□□□ -0.01
LAMB1-204ENST00000393561 CFAP44Q96MT7 982 aa14.98□□□□□ -0.01
LAMB1-204ENST00000393561 GOLGA6L6A8MZA4 724 aa14.98□□□□□ -0.01
LAMB1-204ENST00000393561 HSCBQ8IWL3 235 aa14.98□□□□□ -0.01
LAMB1-204ENST00000393561 KTN1Q86UP2 1357 aaKnown RBP14.97□□□□□ -0.01
LAMB1-204ENST00000393561 NPHP1O15259 732 aa14.95□□□□□ -0.02
LAMB1-204ENST00000393561 PKD2Q13563 968 aa14.95□□□□□ -0.02
LAMB1-204ENST00000393561 CARMIL2Q6F5E8 1435 aa14.95□□□□□ -0.02
LAMB1-204ENST00000393561 MCCP23508 829 aa14.95□□□□□ -0.02
LAMB1-204ENST00000393561 PLCB2Q00722 1185 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms