RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 ADAMTS12P58397 1594 aa33.12■■■□□ 2.89
SPHK1-202ENST00000392496 EIF4G3O43432 1585 aaKnown RBP33.07■■■□□ 2.88
SPHK1-202ENST00000392496 APLP2Q06481 763 aa33.06■■■□□ 2.88
SPHK1-202ENST00000392496 EFCAB5A4FU69 1503 aa33.04■■■□□ 2.88
SPHK1-202ENST00000392496 SNAPC4Q5SXM2 1469 aa32.92■■■□□ 2.86
SPHK1-202ENST00000392496 TTBK1Q5TCY1 1321 aaPredicted RBP32.92■■■□□ 2.86
SPHK1-202ENST00000392496 MAGI1Q96QZ7 1491 aaPredicted RBP32.88■■■□□ 2.85
SPHK1-202ENST00000392496 SAMD9Q5K651 1589 aa32.87■■■□□ 2.85
SPHK1-202ENST00000392496 HRCP23327 699 aa32.86■■■□□ 2.85
SPHK1-202ENST00000392496 FHOD3Q2V2M9 1422 aa32.82■■■□□ 2.84
SPHK1-202ENST00000392496 MAP3K1Q13233 1512 aa32.81■■■□□ 2.84
SPHK1-202ENST00000392496 IQGAP2Q13576 1575 aa32.8■■■□□ 2.84
SPHK1-202ENST00000392496 GRIN2AQ12879 1464 aa32.78■■■□□ 2.84
SPHK1-202ENST00000392496 P3H3Q8IVL6 736 aa32.78■■■□□ 2.84
SPHK1-202ENST00000392496 SYNJ2O15056 1496 aa32.75■■■□□ 2.83
SPHK1-202ENST00000392496 PCF11O94913 1555 aaKnown RBP32.74■■■□□ 2.83
SPHK1-202ENST00000392496 FMN1Q68DA7 1419 aa32.73■■■□□ 2.83
SPHK1-202ENST00000392496 CHMP7Q8WUX9 453 aaPredicted RBP32.72■■■□□ 2.83
SPHK1-202ENST00000392496 TIAM1Q13009 1591 aa32.71■■■□□ 2.83
SPHK1-202ENST00000392496 FBLN2P98095 1184 aa32.71■■■□□ 2.83
SPHK1-202ENST00000392496 FYCO1Q9BQS8 1478 aa32.71■■■□□ 2.83
SPHK1-202ENST00000392496 CASKIN1Q8WXD9 1431 aa32.7■■■□□ 2.83
SPHK1-202ENST00000392496 KIAA0586Q9BVV6 1533 aa32.69■■■□□ 2.82
SPHK1-202ENST00000392496 KANK4Q5T7N3 995 aaPredicted RBP32.69■■■□□ 2.82
SPHK1-202ENST00000392496 UGGT2Q9NYU1 1516 aa32.66■■■□□ 2.82
SPHK1-202ENST00000392496 CFAP43Q8NDM7 1665 aa32.65■■■□□ 2.82
SPHK1-202ENST00000392496 CEP170Q5SW79 1584 aa32.56■■■□□ 2.8
SPHK1-202ENST00000392496 LRRC9Q6ZRR7 1453 aa32.55■■■□□ 2.8
SPHK1-202ENST00000392496 NUP160Q12769 1436 aa32.54■■■□□ 2.8
SPHK1-202ENST00000392496 CHD1O14646 1710 aa32.5■■■□□ 2.79
SPHK1-202ENST00000392496 OSCARQ8IYS5 282 aa32.49■■■□□ 2.79
SPHK1-202ENST00000392496 ATP1B4Q9UN42 357 aaPredicted RBP32.47■■■□□ 2.79
SPHK1-202ENST00000392496 KIAA0556O60303 1618 aa32.47■■■□□ 2.79
SPHK1-202ENST00000392496 DISP1Q96F81 1524 aa32.45■■■□□ 2.79
SPHK1-202ENST00000392496 RRBP1Q9P2E9 1410 aaKnown RBP32.45■■■□□ 2.79
SPHK1-202ENST00000392496 LRRIQ1Q96JM4 1722 aa32.4■■■□□ 2.78
SPHK1-202ENST00000392496 ZEB1P37275 1124 aaPredicted RBP32.4■■■□□ 2.78
SPHK1-202ENST00000392496 HECW1Q76N89 1606 aa32.37■■■□□ 2.77
SPHK1-202ENST00000392496 CCDC18Q5T9S5 1454 aa32.34■■■□□ 2.77
SPHK1-202ENST00000392496 CCNB3Q8WWL7 1395 aa32.31■■■□□ 2.76
SPHK1-202ENST00000392496 HNRNPUL2Q1KMD3 747 aaKnown RBP32.3■■■□□ 2.76
SPHK1-202ENST00000392496 JPH4Q96JJ6 628 aa32.28■■■□□ 2.76
SPHK1-202ENST00000392496 CARMIL2Q6F5E8 1435 aa32.27■■■□□ 2.76
SPHK1-202ENST00000392496 PHLDB1Q86UU1 1377 aa32.24■■■□□ 2.75
SPHK1-202ENST00000392496 MTUS2Q5JR59 1369 aa32.24■■■□□ 2.75
SPHK1-202ENST00000392496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.23■■■□□ 2.75
SPHK1-202ENST00000392496 EPRSP07814 1512 aaKnown RBP32.22■■■□□ 2.75
SPHK1-202ENST00000392496 EHBP1L1Q8N3D4 1523 aa32.22■■■□□ 2.75
SPHK1-202ENST00000392496 RAPGEF6Q8TEU7 1601 aa32.19■■■□□ 2.74
SPHK1-202ENST00000392496 CCER1Q8TC90 406 aaPredicted RBP32.18■■■□□ 2.74
SPHK1-202ENST00000392496 SUPT6HQ7KZ85 1726 aaKnown RBP32.14■■■□□ 2.74
SPHK1-202ENST00000392496 CLASP1Q7Z460 1538 aa32.14■■■□□ 2.73
SPHK1-202ENST00000392496 MAGI3Q5TCQ9 1506 aa32.11■■■□□ 2.73
SPHK1-202ENST00000392496 NUP153P49790 1475 aaKnown RBP32.1■■■□□ 2.73
SPHK1-202ENST00000392496 CDK13Q14004 1512 aaKnown RBP32.1■■■□□ 2.73
SPHK1-202ENST00000392496 NCOA2Q15596 1464 aa32.09■■■□□ 2.73
SPHK1-202ENST00000392496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.08■■■□□ 2.73
SPHK1-202ENST00000392496 SHROOM2Q13796 1616 aa32.07■■■□□ 2.72
SPHK1-202ENST00000392496 ARHGEF11O15085 1522 aa32.06■■■□□ 2.72
SPHK1-202ENST00000392496 PRG4Q92954 1404 aaPredicted RBP32.04■■■□□ 2.72
SPHK1-202ENST00000392496 FGD6Q6ZV73 1430 aa32.02■■■□□ 2.72
SPHK1-202ENST00000392496 PLB1Q6P1J6 1458 aa32.01■■■□□ 2.72
SPHK1-202ENST00000392496 MYOM3Q5VTT5 1437 aa31.99■■■□□ 2.71
SPHK1-202ENST00000392496 ABCA8O94911 1581 aa31.98■■■□□ 2.71
SPHK1-202ENST00000392496 FAM50AQ14320 339 aaKnown RBP31.96■■■□□ 2.71
SPHK1-202ENST00000392496 CDK11AQ9UQ88 783 aaPredicted RBP31.93■■■□□ 2.7
SPHK1-202ENST00000392496 ARID3CA6NKF2 412 aa31.91■■■□□ 2.7
SPHK1-202ENST00000392496 DNAJC5Q9H3Z4 198 aa31.91■■■□□ 2.7
SPHK1-202ENST00000392496 ITGAEP38570 1179 aa31.9■■■□□ 2.7
SPHK1-202ENST00000392496 PTPRGP23470 1445 aa31.9■■■□□ 2.7
SPHK1-202ENST00000392496 PTPN23Q9H3S7 1636 aa31.84■■■□□ 2.69
SPHK1-202ENST00000392496 TROQ12816 1431 aaPredicted RBP31.83■■■□□ 2.69
SPHK1-202ENST00000392496 MIA2Q96PC5 1412 aa31.81■■■□□ 2.68
SPHK1-202ENST00000392496 TCOF1Q13428 1488 aaKnown RBP31.81■■■□□ 2.68
SPHK1-202ENST00000392496 ADCY10Q96PN6 1610 aa31.78■■■□□ 2.68
SPHK1-202ENST00000392496 ATP10BO94823 1461 aa31.77■■■□□ 2.68
SPHK1-202ENST00000392496 SETD5Q9C0A6 1442 aa31.77■■■□□ 2.68
SPHK1-202ENST00000392496 ERCC6L2Q5T890 1561 aa31.76■■■□□ 2.67
SPHK1-202ENST00000392496 DHX57Q6P158 1386 aaKnown RBP31.74■■■□□ 2.67
SPHK1-202ENST00000392496 UACAQ9BZF9 1416 aa31.73■■■□□ 2.67
SPHK1-202ENST00000392496 RIMBP3CA6NJZ7 1639 aa31.72■■■□□ 2.67
SPHK1-202ENST00000392496 RIMBP3BA6NNM3 1639 aa31.72■■■□□ 2.67
SPHK1-202ENST00000392496 RAB3GAP2Q9H2M9 1393 aa31.72■■■□□ 2.67
SPHK1-202ENST00000392496 RIMBP3Q9UFD9 1639 aa31.72■■■□□ 2.67
SPHK1-202ENST00000392496 CLSPNQ9HAW4 1339 aa31.72■■■□□ 2.67
SPHK1-202ENST00000392496 PLEKHD1A6NEE1 506 aa31.66■■■□□ 2.66
SPHK1-202ENST00000392496 PTPRKQ15262 1439 aa31.65■■■□□ 2.66
SPHK1-202ENST00000392496 ITSN2Q9NZM3 1697 aa31.64■■■□□ 2.66
SPHK1-202ENST00000392496 KIF14Q15058 1648 aa31.64■■■□□ 2.66
SPHK1-202ENST00000392496 ABCC2Q92887 1545 aa31.64■■■□□ 2.66
SPHK1-202ENST00000392496 CYB5RLQ6IPT4 315 aa31.59■■■□□ 2.65
SPHK1-202ENST00000392496 HFM1A2PYH4 1435 aa31.58■■■□□ 2.65
SPHK1-202ENST00000392496 GPATCH8Q9UKJ3 1502 aaKnown RBP31.57■■■□□ 2.64
SPHK1-202ENST00000392496 UHRF1BP1LA0JNW5 1464 aa31.55■■■□□ 2.64
SPHK1-202ENST00000392496 ABCC10Q5T3U5 1492 aa31.54■■■□□ 2.64
SPHK1-202ENST00000392496 AKNAQ7Z591 1439 aa31.51■■■□□ 2.63
SPHK1-202ENST00000392496 DNMT1P26358 1616 aaKnown RBP31.49■■■□□ 2.63
SPHK1-202ENST00000392496 NAIPQ13075 1403 aa31.49■■■□□ 2.63
SPHK1-202ENST00000392496 CDC42BPAQ5VT25 1732 aa31.48■■■□□ 2.63
SPHK1-202ENST00000392496 CFDP1Q9UEE9 299 aaPredicted RBP31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms