RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 ADAMTS12P58397 1594 aa19.08■□□□□ 0.65
TMCO1-202ENST00000392129 SNAPC4Q5SXM2 1469 aa19.05■□□□□ 0.64
TMCO1-202ENST00000392129 CTTNBP2Q8WZ74 1663 aa19.05■□□□□ 0.64
TMCO1-202ENST00000392129 APLP2Q06481 763 aa19.03■□□□□ 0.64
TMCO1-202ENST00000392129 MAGI1Q96QZ7 1491 aaPredicted RBP19.01■□□□□ 0.63
TMCO1-202ENST00000392129 EFCAB5A4FU69 1503 aa18.98■□□□□ 0.63
TMCO1-202ENST00000392129 P3H3Q8IVL6 736 aa18.98■□□□□ 0.63
TMCO1-202ENST00000392129 TTBK1Q5TCY1 1321 aaPredicted RBP18.97■□□□□ 0.63
TMCO1-202ENST00000392129 CHMP7Q8WUX9 453 aaPredicted RBP18.95■□□□□ 0.62
TMCO1-202ENST00000392129 GRIN2AQ12879 1464 aa18.95■□□□□ 0.62
TMCO1-202ENST00000392129 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
TMCO1-202ENST00000392129 FHOD3Q2V2M9 1422 aa18.93■□□□□ 0.62
TMCO1-202ENST00000392129 IQGAP2Q13576 1575 aa18.9■□□□□ 0.62
TMCO1-202ENST00000392129 AEBP2Q6ZN18 517 aaPredicted RBP18.9■□□□□ 0.62
TMCO1-202ENST00000392129 SAMD9Q5K651 1589 aa18.89■□□□□ 0.62
TMCO1-202ENST00000392129 KIAA0586Q9BVV6 1533 aa18.89■□□□□ 0.62
TMCO1-202ENST00000392129 FBLN2P98095 1184 aa18.89■□□□□ 0.61
TMCO1-202ENST00000392129 KANK4Q5T7N3 995 aaPredicted RBP18.86■□□□□ 0.61
TMCO1-202ENST00000392129 FMN1Q68DA7 1419 aa18.85■□□□□ 0.61
TMCO1-202ENST00000392129 UGGT2Q9NYU1 1516 aa18.83■□□□□ 0.6
TMCO1-202ENST00000392129 MAP3K1Q13233 1512 aa18.82■□□□□ 0.6
TMCO1-202ENST00000392129 NUP160Q12769 1436 aa18.82■□□□□ 0.6
TMCO1-202ENST00000392129 CASKIN1Q8WXD9 1431 aa18.82■□□□□ 0.6
TMCO1-202ENST00000392129 CEP170Q5SW79 1584 aa18.8■□□□□ 0.6
TMCO1-202ENST00000392129 PCF11O94913 1555 aaKnown RBP18.8■□□□□ 0.6
TMCO1-202ENST00000392129 FYCO1Q9BQS8 1478 aa18.8■□□□□ 0.6
TMCO1-202ENST00000392129 ATP1B4Q9UN42 357 aaPredicted RBP18.78■□□□□ 0.6
TMCO1-202ENST00000392129 TIAM1Q13009 1591 aa18.77■□□□□ 0.6
TMCO1-202ENST00000392129 DISP1Q96F81 1524 aa18.74■□□□□ 0.59
TMCO1-202ENST00000392129 JPH4Q96JJ6 628 aa18.73■□□□□ 0.59
TMCO1-202ENST00000392129 LRRC9Q6ZRR7 1453 aa18.72■□□□□ 0.59
TMCO1-202ENST00000392129 HRCP23327 699 aa18.71■□□□□ 0.59
TMCO1-202ENST00000392129 KIAA0556O60303 1618 aa18.7■□□□□ 0.58
TMCO1-202ENST00000392129 CFAP43Q8NDM7 1665 aa18.68■□□□□ 0.58
TMCO1-202ENST00000392129 CHD1O14646 1710 aa18.65■□□□□ 0.58
TMCO1-202ENST00000392129 CARMIL2Q6F5E8 1435 aa18.65■□□□□ 0.58
TMCO1-202ENST00000392129 RRBP1Q9P2E9 1410 aaKnown RBP18.62■□□□□ 0.57
TMCO1-202ENST00000392129 HECW1Q76N89 1606 aa18.6■□□□□ 0.57
TMCO1-202ENST00000392129 CCDC18Q5T9S5 1454 aa18.6■□□□□ 0.57
TMCO1-202ENST00000392129 LRRIQ1Q96JM4 1722 aa18.59■□□□□ 0.57
TMCO1-202ENST00000392129 HNRNPUL2Q1KMD3 747 aaKnown RBP18.59■□□□□ 0.57
TMCO1-202ENST00000392129 MTUS2Q5JR59 1369 aa18.58■□□□□ 0.57
TMCO1-202ENST00000392129 PHLDB1Q86UU1 1377 aa18.57■□□□□ 0.56
TMCO1-202ENST00000392129 CCNB3Q8WWL7 1395 aa18.57■□□□□ 0.56
TMCO1-202ENST00000392129 EPRSP07814 1512 aaKnown RBP18.57■□□□□ 0.56
TMCO1-202ENST00000392129 PRG4Q92954 1404 aaPredicted RBP18.57■□□□□ 0.56
TMCO1-202ENST00000392129 RAPGEF6Q8TEU7 1601 aa18.52■□□□□ 0.56
TMCO1-202ENST00000392129 NUP153P49790 1475 aaKnown RBP18.52■□□□□ 0.56
TMCO1-202ENST00000392129 CDK13Q14004 1512 aaKnown RBP18.51■□□□□ 0.55
TMCO1-202ENST00000392129 PLB1Q6P1J6 1458 aa18.51■□□□□ 0.55
TMCO1-202ENST00000392129 ARID3CA6NKF2 412 aa18.51■□□□□ 0.55
TMCO1-202ENST00000392129 EHBP1L1Q8N3D4 1523 aa18.5■□□□□ 0.55
TMCO1-202ENST00000392129 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
TMCO1-202ENST00000392129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.5■□□□□ 0.55
TMCO1-202ENST00000392129 MAGI3Q5TCQ9 1506 aa18.5■□□□□ 0.55
TMCO1-202ENST00000392129 PTPRGP23470 1445 aa18.48■□□□□ 0.55
TMCO1-202ENST00000392129 CLASP1Q7Z460 1538 aa18.47■□□□□ 0.55
TMCO1-202ENST00000392129 NCOA2Q15596 1464 aa18.47■□□□□ 0.55
TMCO1-202ENST00000392129 ZEB1P37275 1124 aaPredicted RBP18.47■□□□□ 0.55
TMCO1-202ENST00000392129 CDK11AQ9UQ88 783 aaPredicted RBP18.45■□□□□ 0.54
TMCO1-202ENST00000392129 SUPT6HQ7KZ85 1726 aaKnown RBP18.44■□□□□ 0.54
TMCO1-202ENST00000392129 CCER1Q8TC90 406 aaPredicted RBP18.44■□□□□ 0.54
TMCO1-202ENST00000392129 ABCA8O94911 1581 aa18.44■□□□□ 0.54
TMCO1-202ENST00000392129 ARHGEF11O15085 1522 aa18.43■□□□□ 0.54
TMCO1-202ENST00000392129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.43■□□□□ 0.54
TMCO1-202ENST00000392129 FAM50AQ14320 339 aaKnown RBP18.42■□□□□ 0.54
TMCO1-202ENST00000392129 MYOM3Q5VTT5 1437 aa18.41■□□□□ 0.54
TMCO1-202ENST00000392129 FGD6Q6ZV73 1430 aa18.41■□□□□ 0.54
TMCO1-202ENST00000392129 ITGAEP38570 1179 aa18.4■□□□□ 0.54
TMCO1-202ENST00000392129 ERCC6L2Q5T890 1561 aa18.4■□□□□ 0.54
TMCO1-202ENST00000392129 ATP10BO94823 1461 aa18.37■□□□□ 0.53
TMCO1-202ENST00000392129 UACAQ9BZF9 1416 aa18.36■□□□□ 0.53
TMCO1-202ENST00000392129 TROQ12816 1431 aaPredicted RBP18.35■□□□□ 0.53
TMCO1-202ENST00000392129 OSCARQ8IYS5 282 aa18.35■□□□□ 0.53
TMCO1-202ENST00000392129 PLEKHD1A6NEE1 506 aa18.33■□□□□ 0.53
TMCO1-202ENST00000392129 MIA2Q96PC5 1412 aa18.31■□□□□ 0.52
TMCO1-202ENST00000392129 TCOF1Q13428 1488 aaKnown RBP18.28■□□□□ 0.52
TMCO1-202ENST00000392129 PTPN23Q9H3S7 1636 aa18.28■□□□□ 0.52
TMCO1-202ENST00000392129 ABCC2Q92887 1545 aa18.26■□□□□ 0.51
TMCO1-202ENST00000392129 ADCY10Q96PN6 1610 aa18.24■□□□□ 0.51
TMCO1-202ENST00000392129 SETD5Q9C0A6 1442 aa18.24■□□□□ 0.51
TMCO1-202ENST00000392129 UHRF1BP1LA0JNW5 1464 aa18.23■□□□□ 0.51
TMCO1-202ENST00000392129 PTPRKQ15262 1439 aa18.23■□□□□ 0.51
TMCO1-202ENST00000392129 RAB3GAP2Q9H2M9 1393 aa18.23■□□□□ 0.51
TMCO1-202ENST00000392129 KIF14Q15058 1648 aa18.21■□□□□ 0.51
TMCO1-202ENST00000392129 GPATCH8Q9UKJ3 1502 aaKnown RBP18.21■□□□□ 0.51
TMCO1-202ENST00000392129 CFDP1Q9UEE9 299 aaPredicted RBP18.2■□□□□ 0.5
TMCO1-202ENST00000392129 DHX57Q6P158 1386 aaKnown RBP18.2■□□□□ 0.5
TMCO1-202ENST00000392129 ABCC10Q5T3U5 1492 aa18.18■□□□□ 0.5
TMCO1-202ENST00000392129 ZNF644Q9H582 1327 aaPredicted RBP18.17■□□□□ 0.5
TMCO1-202ENST00000392129 KDM5BQ9UGL1 1544 aa18.17■□□□□ 0.5
TMCO1-202ENST00000392129 CLSPNQ9HAW4 1339 aa18.15■□□□□ 0.5
TMCO1-202ENST00000392129 HFM1A2PYH4 1435 aa18.15■□□□□ 0.5
TMCO1-202ENST00000392129 ITSN2Q9NZM3 1697 aa18.15■□□□□ 0.5
TMCO1-202ENST00000392129 CHIC2Q9UKJ5 165 aa18.12■□□□□ 0.49
TMCO1-202ENST00000392129 ZNF777Q9ULD5 760 aaPredicted RBP18.11■□□□□ 0.49
TMCO1-202ENST00000392129 ZCCHC11Q5TAX3 1644 aaKnown RBP18.11■□□□□ 0.49
TMCO1-202ENST00000392129 NAIPQ13075 1403 aa18.11■□□□□ 0.49
TMCO1-202ENST00000392129 ABCC5O15440 1437 aa18.1■□□□□ 0.49
TMCO1-202ENST00000392129 DAPK1P53355 1430 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms