RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 FHAD1B1AJZ9 1412 aa17.86■□□□□ 0.45
SMARCAL1-203ENST00000392128 PPARGC1BQ86YN6 1023 aaKnown RBP17.82■□□□□ 0.44
SMARCAL1-203ENST00000392128 EFCAB5A4FU69 1503 aa17.81■□□□□ 0.44
SMARCAL1-203ENST00000392128 SNAPC4Q5SXM2 1469 aa17.76■□□□□ 0.43
SMARCAL1-203ENST00000392128 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
SMARCAL1-203ENST00000392128 APLP2Q06481 763 aa17.73■□□□□ 0.43
SMARCAL1-203ENST00000392128 SAMD9Q5K651 1589 aa17.73■□□□□ 0.43
SMARCAL1-203ENST00000392128 IQGAP2Q13576 1575 aa17.69■□□□□ 0.42
SMARCAL1-203ENST00000392128 GRIN2AQ12879 1464 aa17.69■□□□□ 0.42
SMARCAL1-203ENST00000392128 SYNJ2O15056 1496 aa17.67■□□□□ 0.42
SMARCAL1-203ENST00000392128 FHOD3Q2V2M9 1422 aa17.67■□□□□ 0.42
SMARCAL1-203ENST00000392128 MAP3K1Q13233 1512 aa17.66■□□□□ 0.42
SMARCAL1-203ENST00000392128 TTBK1Q5TCY1 1321 aaPredicted RBP17.65■□□□□ 0.42
SMARCAL1-203ENST00000392128 PCF11O94913 1555 aaKnown RBP17.64■□□□□ 0.41
SMARCAL1-203ENST00000392128 KIAA0586Q9BVV6 1533 aa17.63■□□□□ 0.41
SMARCAL1-203ENST00000392128 FMN1Q68DA7 1419 aa17.62■□□□□ 0.41
SMARCAL1-203ENST00000392128 P3H3Q8IVL6 736 aa17.62■□□□□ 0.41
SMARCAL1-203ENST00000392128 TIAM1Q13009 1591 aa17.62■□□□□ 0.41
SMARCAL1-203ENST00000392128 FYCO1Q9BQS8 1478 aa17.62■□□□□ 0.41
SMARCAL1-203ENST00000392128 UGGT2Q9NYU1 1516 aa17.61■□□□□ 0.41
SMARCAL1-203ENST00000392128 CASKIN1Q8WXD9 1431 aa17.6■□□□□ 0.41
SMARCAL1-203ENST00000392128 CFAP43Q8NDM7 1665 aa17.6■□□□□ 0.41
SMARCAL1-203ENST00000392128 CEP170Q5SW79 1584 aa17.58■□□□□ 0.4
SMARCAL1-203ENST00000392128 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.4
SMARCAL1-203ENST00000392128 HRCP23327 699 aa17.57■□□□□ 0.4
SMARCAL1-203ENST00000392128 KANK4Q5T7N3 995 aaPredicted RBP17.57■□□□□ 0.4
SMARCAL1-203ENST00000392128 NUP160Q12769 1436 aa17.56■□□□□ 0.4
SMARCAL1-203ENST00000392128 KIAA0556O60303 1618 aa17.52■□□□□ 0.39
SMARCAL1-203ENST00000392128 LRRC9Q6ZRR7 1453 aa17.52■□□□□ 0.39
SMARCAL1-203ENST00000392128 DISP1Q96F81 1524 aa17.5■□□□□ 0.39
SMARCAL1-203ENST00000392128 FBLN2P98095 1184 aa17.49■□□□□ 0.39
SMARCAL1-203ENST00000392128 LRRIQ1Q96JM4 1722 aa17.48■□□□□ 0.39
SMARCAL1-203ENST00000392128 CHD1O14646 1710 aa17.47■□□□□ 0.39
SMARCAL1-203ENST00000392128 RRBP1Q9P2E9 1410 aaKnown RBP17.45■□□□□ 0.38
SMARCAL1-203ENST00000392128 HECW1Q76N89 1606 aa17.45■□□□□ 0.38
SMARCAL1-203ENST00000392128 ATP1B4Q9UN42 357 aaPredicted RBP17.44■□□□□ 0.38
SMARCAL1-203ENST00000392128 CCDC18Q5T9S5 1454 aa17.42■□□□□ 0.38
SMARCAL1-203ENST00000392128 JPH4Q96JJ6 628 aa17.39■□□□□ 0.37
SMARCAL1-203ENST00000392128 CARMIL2Q6F5E8 1435 aa17.39■□□□□ 0.37
SMARCAL1-203ENST00000392128 CCNB3Q8WWL7 1395 aa17.36■□□□□ 0.37
SMARCAL1-203ENST00000392128 RAPGEF6Q8TEU7 1601 aa17.36■□□□□ 0.37
SMARCAL1-203ENST00000392128 EPRSP07814 1512 aaKnown RBP17.36■□□□□ 0.37
SMARCAL1-203ENST00000392128 EHBP1L1Q8N3D4 1523 aa17.35■□□□□ 0.37
SMARCAL1-203ENST00000392128 PHLDB1Q86UU1 1377 aa17.34■□□□□ 0.37
SMARCAL1-203ENST00000392128 MTUS2Q5JR59 1369 aa17.34■□□□□ 0.37
SMARCAL1-203ENST00000392128 SHROOM2Q13796 1616 aa17.33■□□□□ 0.36
SMARCAL1-203ENST00000392128 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
SMARCAL1-203ENST00000392128 SUPT6HQ7KZ85 1726 aaKnown RBP17.32■□□□□ 0.36
SMARCAL1-203ENST00000392128 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
SMARCAL1-203ENST00000392128 NUP153P49790 1475 aaKnown RBP17.3■□□□□ 0.36
SMARCAL1-203ENST00000392128 MAGI3Q5TCQ9 1506 aa17.3■□□□□ 0.36
SMARCAL1-203ENST00000392128 CDK13Q14004 1512 aaKnown RBP17.29■□□□□ 0.36
SMARCAL1-203ENST00000392128 PRG4Q92954 1404 aaPredicted RBP17.28■□□□□ 0.36
SMARCAL1-203ENST00000392128 ARHGEF11O15085 1522 aa17.28■□□□□ 0.36
SMARCAL1-203ENST00000392128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
SMARCAL1-203ENST00000392128 NCOA2Q15596 1464 aa17.27■□□□□ 0.36
SMARCAL1-203ENST00000392128 CLASP1Q7Z460 1538 aa17.26■□□□□ 0.35
SMARCAL1-203ENST00000392128 PLB1Q6P1J6 1458 aa17.26■□□□□ 0.35
SMARCAL1-203ENST00000392128 ABCA8O94911 1581 aa17.25■□□□□ 0.35
SMARCAL1-203ENST00000392128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMARCAL1-203ENST00000392128 CCER1Q8TC90 406 aaPredicted RBP17.23■□□□□ 0.35
SMARCAL1-203ENST00000392128 FGD6Q6ZV73 1430 aa17.23■□□□□ 0.35
SMARCAL1-203ENST00000392128 MYOM3Q5VTT5 1437 aa17.22■□□□□ 0.35
SMARCAL1-203ENST00000392128 PTPRGP23470 1445 aa17.18■□□□□ 0.34
SMARCAL1-203ENST00000392128 CDK11AQ9UQ88 783 aaPredicted RBP17.17■□□□□ 0.34
SMARCAL1-203ENST00000392128 ARID3CA6NKF2 412 aa17.16■□□□□ 0.34
SMARCAL1-203ENST00000392128 FAM50AQ14320 339 aaKnown RBP17.16■□□□□ 0.34
SMARCAL1-203ENST00000392128 PTPN23Q9H3S7 1636 aa17.15■□□□□ 0.34
SMARCAL1-203ENST00000392128 ERCC6L2Q5T890 1561 aa17.15■□□□□ 0.34
SMARCAL1-203ENST00000392128 ADCY10Q96PN6 1610 aa17.14■□□□□ 0.34
SMARCAL1-203ENST00000392128 TROQ12816 1431 aaPredicted RBP17.14■□□□□ 0.33
SMARCAL1-203ENST00000392128 TCOF1Q13428 1488 aaKnown RBP17.12■□□□□ 0.33
SMARCAL1-203ENST00000392128 MIA2Q96PC5 1412 aa17.12■□□□□ 0.33
SMARCAL1-203ENST00000392128 ATP10BO94823 1461 aa17.12■□□□□ 0.33
SMARCAL1-203ENST00000392128 ITGAEP38570 1179 aa17.12■□□□□ 0.33
SMARCAL1-203ENST00000392128 UACAQ9BZF9 1416 aa17.1■□□□□ 0.33
SMARCAL1-203ENST00000392128 ABCC2Q92887 1545 aa17.07■□□□□ 0.32
SMARCAL1-203ENST00000392128 KIF14Q15058 1648 aa17.07■□□□□ 0.32
SMARCAL1-203ENST00000392128 ITSN2Q9NZM3 1697 aa17.07■□□□□ 0.32
SMARCAL1-203ENST00000392128 SETD5Q9C0A6 1442 aa17.06■□□□□ 0.32
SMARCAL1-203ENST00000392128 RAB3GAP2Q9H2M9 1393 aa17.04■□□□□ 0.32
SMARCAL1-203ENST00000392128 DHX57Q6P158 1386 aaKnown RBP17.04■□□□□ 0.32
SMARCAL1-203ENST00000392128 PLEKHD1A6NEE1 506 aa17.03■□□□□ 0.32
SMARCAL1-203ENST00000392128 UHRF1BP1LA0JNW5 1464 aa17.02■□□□□ 0.32
SMARCAL1-203ENST00000392128 PTPRKQ15262 1439 aa17.02■□□□□ 0.32
SMARCAL1-203ENST00000392128 CLSPNQ9HAW4 1339 aa17.02■□□□□ 0.32
SMARCAL1-203ENST00000392128 GPATCH8Q9UKJ3 1502 aaKnown RBP17■□□□□ 0.31
SMARCAL1-203ENST00000392128 ABCC10Q5T3U5 1492 aa17■□□□□ 0.31
SMARCAL1-203ENST00000392128 HFM1A2PYH4 1435 aa16.99■□□□□ 0.31
SMARCAL1-203ENST00000392128 CDC42BPAQ5VT25 1732 aa16.99■□□□□ 0.31
SMARCAL1-203ENST00000392128 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
SMARCAL1-203ENST00000392128 DNMT1P26358 1616 aaKnown RBP16.97■□□□□ 0.31
SMARCAL1-203ENST00000392128 ZCCHC11Q5TAX3 1644 aaKnown RBP16.96■□□□□ 0.31
SMARCAL1-203ENST00000392128 AKNAQ7Z591 1439 aa16.96■□□□□ 0.31
SMARCAL1-203ENST00000392128 KDM5BQ9UGL1 1544 aa16.95■□□□□ 0.3
SMARCAL1-203ENST00000392128 GCC2Q8IWJ2 1684 aa16.95■□□□□ 0.3
SMARCAL1-203ENST00000392128 CAMSAP2Q08AD1 1489 aa16.94■□□□□ 0.3
SMARCAL1-203ENST00000392128 NAIPQ13075 1403 aa16.94■□□□□ 0.3
SMARCAL1-203ENST00000392128 DAPK1P53355 1430 aa16.93■□□□□ 0.3
SMARCAL1-203ENST00000392128 CFDP1Q9UEE9 299 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms