RNA–Protein interactions for RNA: ENST00000391440.2

RTL8B-201, Transcript of retrotransposon Gag like 8B, humanhuman

APPRIS P1 BASIC

Gene RTL8B, Length 2,026 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8B-201ENST00000391440 ARAP1Q96P48 1450 aa27.54■■■□□ 2
RTL8B-201ENST00000391440 TRIM26Q12899 539 aaPredicted RBP27.53■■■□□ 2
RTL8B-201ENST00000391440 TTBK1Q5TCY1 1321 aaPredicted RBP27.49■■□□□ 1.99
RTL8B-201ENST00000391440 P3H3Q8IVL6 736 aa27.48■■□□□ 1.99
RTL8B-201ENST00000391440 CTTNBP2Q8WZ74 1663 aa27.48■■□□□ 1.99
RTL8B-201ENST00000391440 FBLN2P98095 1184 aa27.43■■□□□ 1.98
RTL8B-201ENST00000391440 MAGI1Q96QZ7 1491 aaPredicted RBP27.43■■□□□ 1.98
RTL8B-201ENST00000391440 CHMP7Q8WUX9 453 aaPredicted RBP27.42■■□□□ 1.98
RTL8B-201ENST00000391440 APLP2Q06481 763 aa27.41■■□□□ 1.98
RTL8B-201ENST00000391440 GRIN2AQ12879 1464 aa27.36■■□□□ 1.97
RTL8B-201ENST00000391440 SYNJ2O15056 1496 aa27.35■■□□□ 1.97
RTL8B-201ENST00000391440 FHOD3Q2V2M9 1422 aa27.33■■□□□ 1.97
RTL8B-201ENST00000391440 EFCAB5A4FU69 1503 aa27.31■■□□□ 1.96
RTL8B-201ENST00000391440 IQGAP2Q13576 1575 aa27.27■■□□□ 1.96
RTL8B-201ENST00000391440 KIAA0586Q9BVV6 1533 aa27.23■■□□□ 1.95
RTL8B-201ENST00000391440 ATP1B4Q9UN42 357 aaPredicted RBP27.22■■□□□ 1.95
RTL8B-201ENST00000391440 SAMD9Q5K651 1589 aa27.21■■□□□ 1.95
RTL8B-201ENST00000391440 CEP170Q5SW79 1584 aa27.18■■□□□ 1.94
RTL8B-201ENST00000391440 KANK4Q5T7N3 995 aaPredicted RBP27.17■■□□□ 1.94
RTL8B-201ENST00000391440 NUP160Q12769 1436 aa27.14■■□□□ 1.93
RTL8B-201ENST00000391440 FMN1Q68DA7 1419 aa27.13■■□□□ 1.93
RTL8B-201ENST00000391440 UGGT2Q9NYU1 1516 aa27.12■■□□□ 1.93
RTL8B-201ENST00000391440 PCF11O94913 1555 aaKnown RBP27.12■■□□□ 1.93
RTL8B-201ENST00000391440 CASKIN1Q8WXD9 1431 aa27.08■■□□□ 1.93
RTL8B-201ENST00000391440 JPH4Q96JJ6 628 aa27.06■■□□□ 1.92
RTL8B-201ENST00000391440 FYCO1Q9BQS8 1478 aa27.04■■□□□ 1.92
RTL8B-201ENST00000391440 DISP1Q96F81 1524 aa27.04■■□□□ 1.92
RTL8B-201ENST00000391440 CHD1O14646 1710 aa27.03■■□□□ 1.92
RTL8B-201ENST00000391440 TIAM1Q13009 1591 aa27.01■■□□□ 1.92
RTL8B-201ENST00000391440 KIAA0556O60303 1618 aa26.99■■□□□ 1.91
RTL8B-201ENST00000391440 MAP3K1Q13233 1512 aa26.98■■□□□ 1.91
RTL8B-201ENST00000391440 LRRC9Q6ZRR7 1453 aa26.93■■□□□ 1.9
RTL8B-201ENST00000391440 CARMIL2Q6F5E8 1435 aa26.91■■□□□ 1.9
RTL8B-201ENST00000391440 CFAP43Q8NDM7 1665 aa26.89■■□□□ 1.9
RTL8B-201ENST00000391440 ARID3CA6NKF2 412 aa26.87■■□□□ 1.89
RTL8B-201ENST00000391440 PRG4Q92954 1404 aaPredicted RBP26.84■■□□□ 1.89
RTL8B-201ENST00000391440 LRRIQ1Q96JM4 1722 aa26.83■■□□□ 1.89
RTL8B-201ENST00000391440 HECW1Q76N89 1606 aa26.81■■□□□ 1.88
RTL8B-201ENST00000391440 HNRNPUL2Q1KMD3 747 aaKnown RBP26.8■■□□□ 1.88
RTL8B-201ENST00000391440 MTUS2Q5JR59 1369 aa26.79■■□□□ 1.88
RTL8B-201ENST00000391440 EPRSP07814 1512 aaKnown RBP26.77■■□□□ 1.88
RTL8B-201ENST00000391440 CCDC18Q5T9S5 1454 aa26.76■■□□□ 1.87
RTL8B-201ENST00000391440 PLB1Q6P1J6 1458 aa26.74■■□□□ 1.87
RTL8B-201ENST00000391440 PHLDB1Q86UU1 1377 aa26.74■■□□□ 1.87
RTL8B-201ENST00000391440 CDK13Q14004 1512 aaKnown RBP26.74■■□□□ 1.87
RTL8B-201ENST00000391440 HRCP23327 699 aa26.73■■□□□ 1.87
RTL8B-201ENST00000391440 RAPGEF6Q8TEU7 1601 aa26.73■■□□□ 1.87
RTL8B-201ENST00000391440 RRBP1Q9P2E9 1410 aaKnown RBP26.72■■□□□ 1.87
RTL8B-201ENST00000391440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.72■■□□□ 1.87
RTL8B-201ENST00000391440 NUP153P49790 1475 aaKnown RBP26.71■■□□□ 1.87
RTL8B-201ENST00000391440 SHROOM2Q13796 1616 aa26.7■■□□□ 1.87
RTL8B-201ENST00000391440 CLASP1Q7Z460 1538 aa26.69■■□□□ 1.86
RTL8B-201ENST00000391440 CCNB3Q8WWL7 1395 aa26.69■■□□□ 1.86
RTL8B-201ENST00000391440 PTPRGP23470 1445 aa26.69■■□□□ 1.86
RTL8B-201ENST00000391440 MAGI3Q5TCQ9 1506 aa26.66■■□□□ 1.86
RTL8B-201ENST00000391440 ERCC6L2Q5T890 1561 aa26.65■■□□□ 1.86
RTL8B-201ENST00000391440 EHBP1L1Q8N3D4 1523 aa26.63■■□□□ 1.85
RTL8B-201ENST00000391440 ITGAEP38570 1179 aa26.61■■□□□ 1.85
RTL8B-201ENST00000391440 NCOA2Q15596 1464 aa26.6■■□□□ 1.85
RTL8B-201ENST00000391440 FAM50AQ14320 339 aaKnown RBP26.6■■□□□ 1.85
RTL8B-201ENST00000391440 ABCA8O94911 1581 aa26.59■■□□□ 1.85
RTL8B-201ENST00000391440 OSCARQ8IYS5 282 aa26.58■■□□□ 1.85
RTL8B-201ENST00000391440 CDK11AQ9UQ88 783 aaPredicted RBP26.58■■□□□ 1.85
RTL8B-201ENST00000391440 SUPT6HQ7KZ85 1726 aaKnown RBP26.56■■□□□ 1.84
RTL8B-201ENST00000391440 CCER1Q8TC90 406 aaPredicted RBP26.51■■□□□ 1.83
RTL8B-201ENST00000391440 FGD6Q6ZV73 1430 aa26.5■■□□□ 1.83
RTL8B-201ENST00000391440 UACAQ9BZF9 1416 aa26.5■■□□□ 1.83
RTL8B-201ENST00000391440 ATP10BO94823 1461 aa26.49■■□□□ 1.83
RTL8B-201ENST00000391440 MYOM3Q5VTT5 1437 aa26.49■■□□□ 1.83
RTL8B-201ENST00000391440 ARHGEF11O15085 1522 aa26.48■■□□□ 1.83
RTL8B-201ENST00000391440 PLEKHD1A6NEE1 506 aa26.45■■□□□ 1.82
RTL8B-201ENST00000391440 TROQ12816 1431 aaPredicted RBP26.44■■□□□ 1.82
RTL8B-201ENST00000391440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.39■■□□□ 1.82
RTL8B-201ENST00000391440 ABCC2Q92887 1545 aa26.37■■□□□ 1.81
RTL8B-201ENST00000391440 ZEB1P37275 1124 aaPredicted RBP26.36■■□□□ 1.81
RTL8B-201ENST00000391440 PTPN23Q9H3S7 1636 aa26.33■■□□□ 1.81
RTL8B-201ENST00000391440 KIF14Q15058 1648 aa26.32■■□□□ 1.8
RTL8B-201ENST00000391440 MIA2Q96PC5 1412 aa26.3■■□□□ 1.8
RTL8B-201ENST00000391440 UHRF1BP1LA0JNW5 1464 aa26.27■■□□□ 1.8
RTL8B-201ENST00000391440 ADCY10Q96PN6 1610 aa26.26■■□□□ 1.79
RTL8B-201ENST00000391440 TCOF1Q13428 1488 aaKnown RBP26.26■■□□□ 1.79
RTL8B-201ENST00000391440 CFDP1Q9UEE9 299 aaPredicted RBP26.26■■□□□ 1.79
RTL8B-201ENST00000391440 ZNF644Q9H582 1327 aaPredicted RBP26.25■■□□□ 1.79
RTL8B-201ENST00000391440 PTPRKQ15262 1439 aa26.25■■□□□ 1.79
RTL8B-201ENST00000391440 GPATCH8Q9UKJ3 1502 aaKnown RBP26.24■■□□□ 1.79
RTL8B-201ENST00000391440 SETD5Q9C0A6 1442 aa26.22■■□□□ 1.79
RTL8B-201ENST00000391440 ZNF777Q9ULD5 760 aaPredicted RBP26.22■■□□□ 1.79
RTL8B-201ENST00000391440 RAB3GAP2Q9H2M9 1393 aa26.21■■□□□ 1.79
RTL8B-201ENST00000391440 KCNH8Q96L42 1107 aa26.21■■□□□ 1.79
RTL8B-201ENST00000391440 KDM5BQ9UGL1 1544 aa26.2■■□□□ 1.78
RTL8B-201ENST00000391440 ABCC10Q5T3U5 1492 aa26.2■■□□□ 1.78
RTL8B-201ENST00000391440 ZCCHC11Q5TAX3 1644 aaKnown RBP26.19■■□□□ 1.78
RTL8B-201ENST00000391440 CHIC2Q9UKJ5 165 aa26.19■■□□□ 1.78
RTL8B-201ENST00000391440 ITSN2Q9NZM3 1697 aa26.14■■□□□ 1.78
RTL8B-201ENST00000391440 DHX57Q6P158 1386 aaKnown RBP26.12■■□□□ 1.77
RTL8B-201ENST00000391440 CAMSAP2Q08AD1 1489 aa26.11■■□□□ 1.77
RTL8B-201ENST00000391440 RRP7BPQ9NSQ0 103 aa26.1■■□□□ 1.77
RTL8B-201ENST00000391440 CDC42BPAQ5VT25 1732 aa26.1■■□□□ 1.77
RTL8B-201ENST00000391440 DAPK1P53355 1430 aa26.07■■□□□ 1.76
RTL8B-201ENST00000391440 HFM1A2PYH4 1435 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms