RNA–Protein interactions for RNA: ENST00000390884.1

RNU6-258P-201, Transcript of RNA, U6 small nuclear 258, pseudogene, humanhuman

BASIC

Gene RNU6-258P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-258P-201ENST00000390884 KRTAP17-1Q9BYP8 105 aa1.81□□□□□ -2.12
RNU6-258P-201ENST00000390884 KRTAP5-3Q6L8H2 238 aa1.8□□□□□ -2.12
RNU6-258P-201ENST00000390884 PTGER2P43116 358 aa1.79□□□□□ -2.12
RNU6-258P-201ENST00000390884 ZNF787Q6DD87 383 aa1.79□□□□□ -2.12
RNU6-258P-201ENST00000390884 ZNF775Q96BV0 537 aaPredicted RBP1.79□□□□□ -2.12
RNU6-258P-201ENST00000390884 HS3ST6Q96QI5 342 aa1.79□□□□□ -2.12
RNU6-258P-201ENST00000390884 ATF5Q9Y2D1 282 aaPredicted RBP1.79□□□□□ -2.12
RNU6-258P-201ENST00000390884 FAM205CA6NFA0 338 aa1.78□□□□□ -2.12
RNU6-258P-201ENST00000390884 CHADLQ6NUI6 762 aa1.78□□□□□ -2.12
RNU6-258P-201ENST00000390884 CNKSR2Q8WXI2 1034 aa1.78□□□□□ -2.12
RNU6-258P-201ENST00000390884 KRTAP4-7Q9BYR0 210 aa1.78□□□□□ -2.12
RNU6-258P-201ENST00000390884 TRAF7Q6Q0C0 670 aa1.77□□□□□ -2.13
RNU6-258P-201ENST00000390884 SPDYE1Q8NFV5 336 aaPredicted RBP1.77□□□□□ -2.13
RNU6-258P-201ENST00000390884 ZRANB1Q9UGI0 708 aa1.77□□□□□ -2.13
RNU6-258P-201ENST00000390884 POLA2Q14181 598 aa1.76□□□□□ -2.13
RNU6-258P-201ENST00000390884 ZBTB12Q9Y330 459 aaPredicted RBP1.75□□□□□ -2.13
RNU6-258P-201ENST00000390884 KRTAP9-9Q9BYP9 154 aa1.74□□□□□ -2.13
RNU6-258P-201ENST00000390884 KRTAP9-4Q9BYQ2 154 aa1.74□□□□□ -2.13
RNU6-258P-201ENST00000390884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP1.73□□□□□ -2.13
RNU6-258P-201ENST00000390884 LAPTM4AQ15012 233 aa1.73□□□□□ -2.13
RNU6-258P-201ENST00000390884 HNRNPUL2Q1KMD3 747 aaKnown RBP1.73□□□□□ -2.13
RNU6-258P-201ENST00000390884 ASTLQ6HA08 431 aaPredicted RBP1.73□□□□□ -2.13
RNU6-258P-201ENST00000390884 HCSTQ9UBK5 93 aa1.73□□□□□ -2.13
RNU6-258P-201ENST00000390884 SEC24BO95487 1268 aa1.72□□□□□ -2.13
RNU6-258P-201ENST00000390884 INSM1Q01101 510 aaPredicted RBP1.72□□□□□ -2.13
RNU6-258P-201ENST00000390884 OSCARQ8IYS5 282 aa1.72□□□□□ -2.13
RNU6-258P-201ENST00000390884 FAM181BA6NEQ2 426 aa1.71□□□□□ -2.14
RNU6-258P-201ENST00000390884 ATMINO43313 823 aaPredicted RBP1.71□□□□□ -2.14
RNU6-258P-201ENST00000390884 PAK3O75914 559 aaPredicted RBP1.69□□□□□ -2.14
RNU6-258P-201ENST00000390884 FARP1Q9Y4F1 1045 aaPredicted RBP1.69□□□□□ -2.14
RNU6-258P-201ENST00000390884 POTEB3A0JP26 581 aa1.68□□□□□ -2.14
RNU6-258P-201ENST00000390884 POTEBQ6S5H4 581 aa1.68□□□□□ -2.14
RNU6-258P-201ENST00000390884 KRTAP4-2Q9BYR5 136 aa1.68□□□□□ -2.14
RNU6-258P-201ENST00000390884 PRR29P0C7W0 189 aa1.67□□□□□ -2.14
RNU6-258P-201ENST00000390884 LCE1DQ5T752 114 aa1.67□□□□□ -2.14
RNU6-258P-201ENST00000390884 TREML4Q6UXN2 200 aa1.66□□□□□ -2.14
RNU6-258P-201ENST00000390884 KRTAP4-9Q9BYQ8 210 aa1.65□□□□□ -2.15
RNU6-258P-201ENST00000390884 SAMD1Q6SPF0 538 aaPredicted RBP1.64□□□□□ -2.15
RNU6-258P-201ENST00000390884 LAMC2Q13753 1193 aa1.63□□□□□ -2.15
RNU6-258P-201ENST00000390884 PHF12Q96QT6 1004 aa1.63□□□□□ -2.15
RNU6-258P-201ENST00000390884 ERBB3P21860 1342 aa1.63□□□□□ -2.15
RNU6-258P-201ENST00000390884 POTEFA5A3E0 1075 aa1.62□□□□□ -2.15
RNU6-258P-201ENST00000390884 GFRA3O60609 400 aa1.62□□□□□ -2.15
RNU6-258P-201ENST00000390884 COBLO75128 1261 aa1.62□□□□□ -2.15
RNU6-258P-201ENST00000390884 ATN1P54259 1190 aaPredicted RBP1.62□□□□□ -2.15
RNU6-258P-201ENST00000390884 ANKRD13DQ6ZTN6 518 aa1.62□□□□□ -2.15
RNU6-258P-201ENST00000390884 KRTAP4-12Q9BQ66 201 aa1.62□□□□□ -2.15
RNU6-258P-201ENST00000390884 LCE2BO14633 110 aa1.61□□□□□ -2.15
RNU6-258P-201ENST00000390884 A0A0G2JS52 829 aa1.6□□□□□ -2.15
RNU6-258P-201ENST00000390884 EIF2AK3Q9NZJ5 1116 aaKnown RBP1.6□□□□□ -2.15
RNU6-258P-201ENST00000390884 PPP4R3CPQ6ZMV5 832 aa1.59□□□□□ -2.15
RNU6-258P-201ENST00000390884 KCTD17Q8N5Z5 321 aa1.59□□□□□ -2.15
RNU6-258P-201ENST00000390884 WFS1O76024 890 aa1.58□□□□□ -2.16
RNU6-258P-201ENST00000390884 COLQQ9Y215 455 aaPredicted RBP1.58□□□□□ -2.16
RNU6-258P-201ENST00000390884 MS4A3Q96HJ5 214 aa1.57□□□□□ -2.16
RNU6-258P-201ENST00000390884 KRTAP4-5Q9BYR2 181 aa1.57□□□□□ -2.16
RNU6-258P-201ENST00000390884 SPDYE2BA6NHP3 402 aa1.56□□□□□ -2.16
RNU6-258P-201ENST00000390884 SPDYE6P0CI01 402 aa1.56□□□□□ -2.16
RNU6-258P-201ENST00000390884 RGS19P49795 217 aa1.56□□□□□ -2.16
RNU6-258P-201ENST00000390884 SPDYE2Q495Y8 402 aa1.56□□□□□ -2.16
RNU6-258P-201ENST00000390884 IFFO2Q5TF58 517 aa1.56□□□□□ -2.16
RNU6-258P-201ENST00000390884 NRG2O14511 850 aaPredicted RBP1.55□□□□□ -2.16
RNU6-258P-201ENST00000390884 WIPF1O43516 503 aa1.55□□□□□ -2.16
RNU6-258P-201ENST00000390884 GOLGA2P5Q9HBQ8 144 aa1.55□□□□□ -2.16
RNU6-258P-201ENST00000390884 VARS2Q5ST30 1063 aaKnown RBP1.54□□□□□ -2.16
RNU6-258P-201ENST00000390884 LCE2AQ5TA79 106 aaPredicted RBP1.54□□□□□ -2.16
RNU6-258P-201ENST00000390884 PLCG2P16885 1265 aa1.53□□□□□ -2.16
RNU6-258P-201ENST00000390884 LORP23490 312 aaPredicted RBP1.53□□□□□ -2.16
RNU6-258P-201ENST00000390884 ZNF710Q8N1W2 664 aa1.53□□□□□ -2.16
RNU6-258P-201ENST00000390884 KRTAP4-11Q9BYQ6 195 aa1.53□□□□□ -2.16
RNU6-258P-201ENST00000390884 IER5LQ5T953 404 aa1.52□□□□□ -2.17
RNU6-258P-201ENST00000390884 ZNF687Q8N1G0 1237 aa1.52□□□□□ -2.17
RNU6-258P-201ENST00000390884 Q8N3U1 123 aa1.5□□□□□ -2.17
RNU6-258P-201ENST00000390884 TMEM151AQ8N4L1 468 aa1.5□□□□□ -2.17
RNU6-258P-201ENST00000390884 BMP2KQ9NSY1 1161 aaPredicted RBP1.5□□□□□ -2.17
RNU6-258P-201ENST00000390884 LSM11P83369 360 aaKnown RBP eCLIP1.49□□□□□ -2.17
RNU6-258P-201ENST00000390884 C3orf67Q6ZVT6 689 aa1.49□□□□□ -2.17
RNU6-258P-201ENST00000390884 IGHA1P01876 353 aa1.48□□□□□ -2.17
RNU6-258P-201ENST00000390884 HOXB1P14653 301 aaPredicted RBP1.47□□□□□ -2.17
RNU6-258P-201ENST00000390884 TIE1P35590 1138 aa1.47□□□□□ -2.17
RNU6-258P-201ENST00000390884 GPAT2Q6NUI2 795 aa1.47□□□□□ -2.17
RNU6-258P-201ENST00000390884 KRTAP19-1Q8IUB9 90 aa1.47□□□□□ -2.17
RNU6-258P-201ENST00000390884 ZSCAN1Q8NBB4 408 aa1.47□□□□□ -2.17
RNU6-258P-201ENST00000390884 GDF11O95390 407 aa1.46□□□□□ -2.18
RNU6-258P-201ENST00000390884 STAC3Q96MF2 364 aa1.46□□□□□ -2.18
RNU6-258P-201ENST00000390884 RIMBP2O15034 1052 aa1.45□□□□□ -2.18
RNU6-258P-201ENST00000390884 YBX3P16989 372 aaKnown RBP eCLIP1.45□□□□□ -2.18
RNU6-258P-201ENST00000390884 KCNMA1Q12791 1236 aa1.45□□□□□ -2.18
RNU6-258P-201ENST00000390884 LSRQ86X29 649 aaPredicted RBP1.45□□□□□ -2.18
RNU6-258P-201ENST00000390884 KCTD12Q96CX2 325 aaKnown RBP1.45□□□□□ -2.18
RNU6-258P-201ENST00000390884 ADAM23O75077 832 aa1.44□□□□□ -2.18
RNU6-258P-201ENST00000390884 POTECB2RU33 542 aa1.43□□□□□ -2.18
RNU6-258P-201ENST00000390884 PTPN5P54829 565 aa1.43□□□□□ -2.18
RNU6-258P-201ENST00000390884 ZNF692Q9BU19 519 aaPredicted RBP1.43□□□□□ -2.18
RNU6-258P-201ENST00000390884 TRIM35Q9UPQ4 493 aa1.43□□□□□ -2.18
RNU6-258P-201ENST00000390884 NPM1P06748 294 aaKnown RBP eCLIP1.42□□□□□ -2.18
RNU6-258P-201ENST00000390884 KRTAP1-1Q07627 177 aa1.42□□□□□ -2.18
RNU6-258P-201ENST00000390884 DOK7Q18PE1 504 aa1.42□□□□□ -2.18
RNU6-258P-201ENST00000390884 PDZRN3Q9UPQ7 1066 aa1.42□□□□□ -2.18
RNU6-258P-201ENST00000390884 TTLL13PA6NNM8 815 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms