RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 TSPOAP1O95153 1857 aa11.74□□□□□ -0.53
TRAV1-2-201ENST00000390423 ADCY10Q96PN6 1610 aa11.72□□□□□ -0.53
TRAV1-2-201ENST00000390423 FHAD1B1AJZ9 1412 aa11.7□□□□□ -0.54
TRAV1-2-201ENST00000390423 HECW2Q9P2P5 1572 aa11.7□□□□□ -0.54
TRAV1-2-201ENST00000390423 ADGRL1O94910 1474 aa11.7□□□□□ -0.54
TRAV1-2-201ENST00000390423 JPH4Q96JJ6 628 aa11.67□□□□□ -0.54
TRAV1-2-201ENST00000390423 RUSC2Q8N2Y8 1516 aa11.66□□□□□ -0.54
TRAV1-2-201ENST00000390423 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRAV1-2-201ENST00000390423 WRNQ14191 1432 aaPredicted RBP eCLIP11.64□□□□□ -0.55
TRAV1-2-201ENST00000390423 ERICH3Q5RHP9 1530 aa11.62□□□□□ -0.55
TRAV1-2-201ENST00000390423 PPRC1Q5VV67 1664 aaKnown RBP11.62□□□□□ -0.55
TRAV1-2-201ENST00000390423 COL17A1Q9UMD9 1497 aaPredicted RBP11.58□□□□□ -0.56
TRAV1-2-201ENST00000390423 BIVM-ERCC5R4GMW8 1640 aa11.58□□□□□ -0.56
TRAV1-2-201ENST00000390423 TOP2BQ02880 1626 aa11.57□□□□□ -0.56
TRAV1-2-201ENST00000390423 FBXO41Q8TF61 875 aa11.53□□□□□ -0.56
TRAV1-2-201ENST00000390423 ASXL2Q76L83 1435 aa11.52□□□□□ -0.56
TRAV1-2-201ENST00000390423 GLI2P10070 1586 aa11.52□□□□□ -0.57
TRAV1-2-201ENST00000390423 TTBK1Q5TCY1 1321 aaPredicted RBP11.52□□□□□ -0.57
TRAV1-2-201ENST00000390423 ABCC2Q92887 1545 aa11.5□□□□□ -0.57
TRAV1-2-201ENST00000390423 KIAA0586Q9BVV6 1533 aa11.49□□□□□ -0.57
TRAV1-2-201ENST00000390423 CUL7Q14999 1698 aa11.49□□□□□ -0.57
TRAV1-2-201ENST00000390423 PTPRGP23470 1445 aa11.48□□□□□ -0.57
TRAV1-2-201ENST00000390423 MAP3K4Q9Y6R4 1608 aa11.47□□□□□ -0.57
TRAV1-2-201ENST00000390423 PLB1Q6P1J6 1458 aa11.46□□□□□ -0.57
TRAV1-2-201ENST00000390423 EPRSP07814 1512 aaKnown RBP11.45□□□□□ -0.58
TRAV1-2-201ENST00000390423 TNIKQ9UKE5 1360 aa11.41□□□□□ -0.58
TRAV1-2-201ENST00000390423 TEX14Q8IWB6 1497 aa11.41□□□□□ -0.58
TRAV1-2-201ENST00000390423 UHRF1BP1LA0JNW5 1464 aa11.4□□□□□ -0.58
TRAV1-2-201ENST00000390423 LMTK3Q96Q04 1460 aa11.4□□□□□ -0.58
TRAV1-2-201ENST00000390423 KIF21BO75037 1637 aa11.39□□□□□ -0.59
TRAV1-2-201ENST00000390423 IGF1RP08069 1367 aa11.39□□□□□ -0.59
TRAV1-2-201ENST00000390423 ZCCHC11Q5TAX3 1644 aaKnown RBP11.38□□□□□ -0.59
TRAV1-2-201ENST00000390423 UACAQ9BZF9 1416 aa11.38□□□□□ -0.59
TRAV1-2-201ENST00000390423 KDM5BQ9UGL1 1544 aa11.37□□□□□ -0.59
TRAV1-2-201ENST00000390423 CARMIL2Q6F5E8 1435 aa11.36□□□□□ -0.59
TRAV1-2-201ENST00000390423 DISP1Q96F81 1524 aa11.35□□□□□ -0.59
TRAV1-2-201ENST00000390423 IQGAP2Q13576 1575 aa11.33□□□□□ -0.6
TRAV1-2-201ENST00000390423 SUPT5HO00267 1087 aaKnown RBP11.33□□□□□ -0.6
TRAV1-2-201ENST00000390423 ILDR2Q71H61 639 aa11.33□□□□□ -0.6
TRAV1-2-201ENST00000390423 PTPRMP28827 1452 aa11.32□□□□□ -0.6
TRAV1-2-201ENST00000390423 WDR7Q9Y4E6 1490 aa11.32□□□□□ -0.6
TRAV1-2-201ENST00000390423 KIF27Q86VH2 1401 aa11.31□□□□□ -0.6
TRAV1-2-201ENST00000390423 ADAMTSL3P82987 1691 aa11.3□□□□□ -0.6
TRAV1-2-201ENST00000390423 MAGI3Q5TCQ9 1506 aa11.3□□□□□ -0.6
TRAV1-2-201ENST00000390423 CARMIL1Q5VZK9 1371 aa11.28□□□□□ -0.6
TRAV1-2-201ENST00000390423 PCF11O94913 1555 aaKnown RBP11.28□□□□□ -0.6
TRAV1-2-201ENST00000390423 CD109Q6YHK3 1445 aa11.28□□□□□ -0.6
TRAV1-2-201ENST00000390423 CFAP43Q8NDM7 1665 aa11.27□□□□□ -0.6
TRAV1-2-201ENST00000390423 SOCS7O14512 581 aa11.27□□□□□ -0.61
TRAV1-2-201ENST00000390423 KIAA0556O60303 1618 aa11.26□□□□□ -0.61
TRAV1-2-201ENST00000390423 KCNH8Q96L42 1107 aa11.25□□□□□ -0.61
TRAV1-2-201ENST00000390423 DISP3Q9P2K9 1392 aa11.25□□□□□ -0.61
TRAV1-2-201ENST00000390423 UGGT2Q9NYU1 1516 aa11.25□□□□□ -0.61
TRAV1-2-201ENST00000390423 MADDQ8WXG6 1647 aa11.24□□□□□ -0.61
TRAV1-2-201ENST00000390423 HSPA2P54652 639 aa11.23□□□□□ -0.61
TRAV1-2-201ENST00000390423 BCORL1Q5H9F3 1711 aa11.22□□□□□ -0.61
TRAV1-2-201ENST00000390423 ARAP3Q8WWN8 1544 aa11.22□□□□□ -0.61
TRAV1-2-201ENST00000390423 CERKQ8TCT0 537 aa11.2□□□□□ -0.62
TRAV1-2-201ENST00000390423 RIMS1Q86UR5 1692 aaKnown RBP11.19□□□□□ -0.62
TRAV1-2-201ENST00000390423 ABCA8O94911 1581 aa11.19□□□□□ -0.62
TRAV1-2-201ENST00000390423 RAPGEF3O95398 923 aa11.18□□□□□ -0.62
TRAV1-2-201ENST00000390423 FRMPD1Q5SYB0 1578 aa11.18□□□□□ -0.62
TRAV1-2-201ENST00000390423 PLPPR3Q6T4P5 718 aa11.16□□□□□ -0.62
TRAV1-2-201ENST00000390423 SPATA31D1Q6ZQQ2 1576 aa11.16□□□□□ -0.62
TRAV1-2-201ENST00000390423 ARID4BQ4LE39 1312 aaPredicted RBP11.15□□□□□ -0.62
TRAV1-2-201ENST00000390423 ARID3CA6NKF2 412 aa11.15□□□□□ -0.62
TRAV1-2-201ENST00000390423 RAPGEF2Q9Y4G8 1499 aa11.12□□□□□ -0.63
TRAV1-2-201ENST00000390423 ABCA9Q8IUA7 1624 aa11.12□□□□□ -0.63
TRAV1-2-201ENST00000390423 SIGLEC1Q9BZZ2 1709 aa11.12□□□□□ -0.63
TRAV1-2-201ENST00000390423 ARHGEF40Q8TER5 1519 aa11.1□□□□□ -0.63
TRAV1-2-201ENST00000390423 CTTNBP2Q8WZ74 1663 aa11.09□□□□□ -0.63
TRAV1-2-201ENST00000390423 ATP10BO94823 1461 aa11.08□□□□□ -0.64
TRAV1-2-201ENST00000390423 NEO1Q92859 1461 aa11.07□□□□□ -0.64
TRAV1-2-201ENST00000390423 PHLDB1Q86UU1 1377 aa11.07□□□□□ -0.64
TRAV1-2-201ENST00000390423 GOLGA3Q08378 1498 aa11.06□□□□□ -0.64
TRAV1-2-201ENST00000390423 RICTORQ6R327 1708 aa11.05□□□□□ -0.64
TRAV1-2-201ENST00000390423 STRCQ7RTU9 1775 aa11.04□□□□□ -0.64
TRAV1-2-201ENST00000390423 YEATS2Q9ULM3 1422 aa11.03□□□□□ -0.64
TRAV1-2-201ENST00000390423 FER1L4A9Z1Z3 1794 aa11.03□□□□□ -0.64
TRAV1-2-201ENST00000390423 TTC37Q6PGP7 1564 aa11.03□□□□□ -0.64
TRAV1-2-201ENST00000390423 MLECQ14165 292 aa11.02□□□□□ -0.65
TRAV1-2-201ENST00000390423 FANCAO15360 1455 aa11.01□□□□□ -0.65
TRAV1-2-201ENST00000390423 DENND4BO75064 1496 aaPredicted RBP11.01□□□□□ -0.65
TRAV1-2-201ENST00000390423 P3H3Q8IVL6 736 aa11.01□□□□□ -0.65
TRAV1-2-201ENST00000390423 PREX1Q8TCU6 1659 aa11.01□□□□□ -0.65
TRAV1-2-201ENST00000390423 POGZQ7Z3K3 1410 aa11□□□□□ -0.65
TRAV1-2-201ENST00000390423 AKNAQ7Z591 1439 aa11□□□□□ -0.65
TRAV1-2-201ENST00000390423 ZFYVE16Q7Z3T8 1539 aa10.99□□□□□ -0.65
TRAV1-2-201ENST00000390423 FHOD3Q2V2M9 1422 aa10.99□□□□□ -0.65
TRAV1-2-201ENST00000390423 ZMYM4Q5VZL5 1548 aa10.99□□□□□ -0.65
TRAV1-2-201ENST00000390423 CEBPAP49715 358 aaPredicted RBP10.98□□□□□ -0.65
TRAV1-2-201ENST00000390423 LTBP4Q8N2S1 1624 aa10.96□□□□□ -0.65
TRAV1-2-201ENST00000390423 RAPGEF6Q8TEU7 1601 aa10.96□□□□□ -0.65
TRAV1-2-201ENST00000390423 EFCAB5A4FU69 1503 aa10.96□□□□□ -0.65
TRAV1-2-201ENST00000390423 ARHGEF12Q9NZN5 1544 aa10.96□□□□□ -0.65
TRAV1-2-201ENST00000390423 HECW1Q76N89 1606 aa10.95□□□□□ -0.66
TRAV1-2-201ENST00000390423 NUP153P49790 1475 aaKnown RBP10.94□□□□□ -0.66
TRAV1-2-201ENST00000390423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.94□□□□□ -0.66
TRAV1-2-201ENST00000390423 HNRNPUL2Q1KMD3 747 aaKnown RBP10.94□□□□□ -0.66
TRAV1-2-201ENST00000390423 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms