RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 FAM69CQ0P6D2 419 aa21.38■■□□□ 1.01
SOD1-202ENST00000389995 JPH4Q96JJ6 628 aa21.38■■□□□ 1.01
SOD1-202ENST00000389995 RUSC2Q8N2Y8 1516 aa21.35■■□□□ 1.01
SOD1-202ENST00000389995 ADCY10Q96PN6 1610 aa21.33■■□□□ 1.01
SOD1-202ENST00000389995 ABCC10Q5T3U5 1492 aa21.33■■□□□ 1.01
SOD1-202ENST00000389995 DIP2BQ9P265 1576 aa21.33■■□□□ 1.01
SOD1-202ENST00000389995 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
SOD1-202ENST00000389995 MAPKBP1O60336 1514 aa21.29■■□□□ 1
SOD1-202ENST00000389995 NPM1P06748 294 aaKnown RBP eCLIP21.28■■□□□ 1
SOD1-202ENST00000389995 KDM6BO15054 1643 aa21.27■■□□□ 1
SOD1-202ENST00000389995 KDM4FA0A1W2PPD8 638 aa21.25■□□□□ 0.99
SOD1-202ENST00000389995 TTBK1Q5TCY1 1321 aaPredicted RBP21.14■□□□□ 0.97
SOD1-202ENST00000389995 KIAA0586Q9BVV6 1533 aa21.12■□□□□ 0.97
SOD1-202ENST00000389995 PPRC1Q5VV67 1664 aaKnown RBP21.08■□□□□ 0.96
SOD1-202ENST00000389995 ILDR1Q86SU0 546 aaPredicted RBP21.07■□□□□ 0.96
SOD1-202ENST00000389995 CUL7Q14999 1698 aa21.07■□□□□ 0.96
SOD1-202ENST00000389995 IGF1RP08069 1367 aa21.07■□□□□ 0.96
SOD1-202ENST00000389995 PTPRGP23470 1445 aa21.04■□□□□ 0.96
SOD1-202ENST00000389995 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
SOD1-202ENST00000389995 ASXL2Q76L83 1435 aa20.98■□□□□ 0.95
SOD1-202ENST00000389995 ABCC2Q92887 1545 aa20.98■□□□□ 0.95
SOD1-202ENST00000389995 ADGRL1O94910 1474 aa20.97■□□□□ 0.95
SOD1-202ENST00000389995 GLI2P10070 1586 aa20.94■□□□□ 0.94
SOD1-202ENST00000389995 TNIKQ9UKE5 1360 aa20.94■□□□□ 0.94
SOD1-202ENST00000389995 COL17A1Q9UMD9 1497 aaPredicted RBP20.92■□□□□ 0.94
SOD1-202ENST00000389995 IQGAP2Q13576 1575 aa20.91■□□□□ 0.94
SOD1-202ENST00000389995 CARMIL1Q5VZK9 1371 aa20.91■□□□□ 0.94
SOD1-202ENST00000389995 CARMIL2Q6F5E8 1435 aa20.91■□□□□ 0.94
SOD1-202ENST00000389995 PLB1Q6P1J6 1458 aa20.91■□□□□ 0.94
SOD1-202ENST00000389995 MAP3K4Q9Y6R4 1608 aa20.89■□□□□ 0.93
SOD1-202ENST00000389995 UHRF1BP1LA0JNW5 1464 aa20.86■□□□□ 0.93
SOD1-202ENST00000389995 UACAQ9BZF9 1416 aa20.86■□□□□ 0.93
SOD1-202ENST00000389995 ZCCHC11Q5TAX3 1644 aaKnown RBP20.86■□□□□ 0.93
SOD1-202ENST00000389995 HECW2Q9P2P5 1572 aa20.85■□□□□ 0.93
SOD1-202ENST00000389995 DISP1Q96F81 1524 aa20.85■□□□□ 0.93
SOD1-202ENST00000389995 EPRSP07814 1512 aaKnown RBP20.84■□□□□ 0.93
SOD1-202ENST00000389995 KDM5BQ9UGL1 1544 aa20.79■□□□□ 0.92
SOD1-202ENST00000389995 TEX14Q8IWB6 1497 aa20.75■□□□□ 0.91
SOD1-202ENST00000389995 KIAA0556O60303 1618 aa20.75■□□□□ 0.91
SOD1-202ENST00000389995 UGGT2Q9NYU1 1516 aa20.73■□□□□ 0.91
SOD1-202ENST00000389995 WDR7Q9Y4E6 1490 aa20.68■□□□□ 0.9
SOD1-202ENST00000389995 RAPGEF2Q9Y4G8 1499 aa20.67■□□□□ 0.9
SOD1-202ENST00000389995 KIF21BO75037 1637 aa20.66■□□□□ 0.9
SOD1-202ENST00000389995 CTTNBP2Q8WZ74 1663 aa20.66■□□□□ 0.9
SOD1-202ENST00000389995 CFAP43Q8NDM7 1665 aa20.64■□□□□ 0.9
SOD1-202ENST00000389995 KCNH8Q96L42 1107 aa20.64■□□□□ 0.89
SOD1-202ENST00000389995 CD109Q6YHK3 1445 aa20.61■□□□□ 0.89
SOD1-202ENST00000389995 MAGI3Q5TCQ9 1506 aa20.58■□□□□ 0.88
SOD1-202ENST00000389995 ABCA8O94911 1581 aa20.57■□□□□ 0.88
SOD1-202ENST00000389995 ARID3CA6NKF2 412 aa20.52■□□□□ 0.88
SOD1-202ENST00000389995 GOLGA3Q08378 1498 aa20.48■□□□□ 0.87
SOD1-202ENST00000389995 ADAMTSL3P82987 1691 aa20.45■□□□□ 0.86
SOD1-202ENST00000389995 ARAP3Q8WWN8 1544 aa20.44■□□□□ 0.86
SOD1-202ENST00000389995 FBXO41Q8TF61 875 aa20.43■□□□□ 0.86
SOD1-202ENST00000389995 P3H3Q8IVL6 736 aa20.42■□□□□ 0.86
SOD1-202ENST00000389995 PTPRMP28827 1452 aa20.42■□□□□ 0.86
SOD1-202ENST00000389995 ABCA9Q8IUA7 1624 aa20.39■□□□□ 0.86
SOD1-202ENST00000389995 ATP10BO94823 1461 aa20.39■□□□□ 0.85
SOD1-202ENST00000389995 RAPGEF3O95398 923 aa20.38■□□□□ 0.85
SOD1-202ENST00000389995 BCORL1Q5H9F3 1711 aa20.37■□□□□ 0.85
SOD1-202ENST00000389995 MADDQ8WXG6 1647 aa20.37■□□□□ 0.85
SOD1-202ENST00000389995 FRMPD1Q5SYB0 1578 aa20.34■□□□□ 0.85
SOD1-202ENST00000389995 PRXQ9BXM0 1461 aa20.34■□□□□ 0.85
SOD1-202ENST00000389995 RIMS1Q86UR5 1692 aaKnown RBP20.32■□□□□ 0.84
SOD1-202ENST00000389995 ARID4BQ4LE39 1312 aaPredicted RBP20.3■□□□□ 0.84
SOD1-202ENST00000389995 PCF11O94913 1555 aaKnown RBP20.3■□□□□ 0.84
SOD1-202ENST00000389995 RAPGEF6Q8TEU7 1601 aa20.29■□□□□ 0.84
SOD1-202ENST00000389995 LMTK3Q96Q04 1460 aa20.28■□□□□ 0.84
SOD1-202ENST00000389995 NEO1Q92859 1461 aa20.26■□□□□ 0.83
SOD1-202ENST00000389995 PHLDB1Q86UU1 1377 aa20.26■□□□□ 0.83
SOD1-202ENST00000389995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.26■□□□□ 0.83
SOD1-202ENST00000389995 HNRNPUL2Q1KMD3 747 aaKnown RBP20.26■□□□□ 0.83
SOD1-202ENST00000389995 PLPPR3Q6T4P5 718 aa20.26■□□□□ 0.83
SOD1-202ENST00000389995 SAMD9Q5K651 1589 aa20.25■□□□□ 0.83
SOD1-202ENST00000389995 RICTORQ6R327 1708 aa20.24■□□□□ 0.83
SOD1-202ENST00000389995 FAM9AQ8IZU1 332 aaPredicted RBP20.23■□□□□ 0.83
SOD1-202ENST00000389995 SIGLEC1Q9BZZ2 1709 aa20.23■□□□□ 0.83
SOD1-202ENST00000389995 HSPA2P54652 639 aa20.22■□□□□ 0.83
SOD1-202ENST00000389995 RANGAP1P46060 587 aaPredicted RBP20.21■□□□□ 0.83
SOD1-202ENST00000389995 ARHGEF40Q8TER5 1519 aa20.21■□□□□ 0.83
SOD1-202ENST00000389995 NUP153P49790 1475 aaKnown RBP20.18■□□□□ 0.82
SOD1-202ENST00000389995 DENND4BO75064 1496 aaPredicted RBP20.14■□□□□ 0.81
SOD1-202ENST00000389995 FER1L4A9Z1Z3 1794 aa20.13■□□□□ 0.81
SOD1-202ENST00000389995 FHOD3Q2V2M9 1422 aa20.12■□□□□ 0.81
SOD1-202ENST00000389995 AKNAQ7Z591 1439 aa20.12■□□□□ 0.81
SOD1-202ENST00000389995 TTC37Q6PGP7 1564 aa20.12■□□□□ 0.81
SOD1-202ENST00000389995 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.11■□□□□ 0.814e-8■■■□□ 14.7
SOD1-202ENST00000389995 FANCAO15360 1455 aa20.11■□□□□ 0.81
SOD1-202ENST00000389995 YEATS2Q9ULM3 1422 aa20.1■□□□□ 0.81
SOD1-202ENST00000389995 CFAP74Q9C0B2 1584 aa20.1■□□□□ 0.81
SOD1-202ENST00000389995 MLECQ14165 292 aa20.1■□□□□ 0.81
SOD1-202ENST00000389995 ZFYVE16Q7Z3T8 1539 aa20.08■□□□□ 0.81
SOD1-202ENST00000389995 CSRNP3Q8WYN3 585 aa20.08■□□□□ 0.81
SOD1-202ENST00000389995 PLEKHD1A6NEE1 506 aa20.07■□□□□ 0.8
SOD1-202ENST00000389995 ZMYM4Q5VZL5 1548 aa20.07■□□□□ 0.8
SOD1-202ENST00000389995 CERKQ8TCT0 537 aa20.06■□□□□ 0.8
SOD1-202ENST00000389995 HECW1Q76N89 1606 aa20.05■□□□□ 0.8
SOD1-202ENST00000389995 POGZQ7Z3K3 1410 aa20.04■□□□□ 0.8
SOD1-202ENST00000389995 EFCAB5A4FU69 1503 aa20.04■□□□□ 0.8
SOD1-202ENST00000389995 CDK13Q14004 1512 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms