RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 TNNT2P45379 298 aaPredicted RBP16.5■□□□□ 0.23
FANCA-202ENST00000389301 GOLGA6L22H0YM25 854 aa16.49■□□□□ 0.23
FANCA-202ENST00000389301 MYH16Q9H6N6 1097 aa16.49■□□□□ 0.23
FANCA-202ENST00000389301 SENP3-EIF4A1A0A087X0R7 540 aa16.49■□□□□ 0.23
FANCA-202ENST00000389301 NCLP19338 710 aaKnown RBP16.47■□□□□ 0.23
FANCA-202ENST00000389301 CCDC180Q9P1Z9 1646 aa16.47■□□□□ 0.23
FANCA-202ENST00000389301 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.46■□□□□ 0.234e-7■■□□□ 12.9
FANCA-202ENST00000389301 PPP4R2Q9NY27 417 aa16.46■□□□□ 0.23
FANCA-202ENST00000389301 PTMAP06454 111 aaKnown RBP16.44■□□□□ 0.22
FANCA-202ENST00000389301 STAG3Q9UJ98 1225 aa16.42■□□□□ 0.22
FANCA-202ENST00000389301 CLIP1P30622 1438 aa16.42■□□□□ 0.22
FANCA-202ENST00000389301 DNTTIP2Q5QJE6 756 aaKnown RBP16.41■□□□□ 0.22
FANCA-202ENST00000389301 DEKP35659 375 aaKnown RBP16.41■□□□□ 0.22
FANCA-202ENST00000389301 MTUS2Q5JR59 1369 aa16.38■□□□□ 0.21
FANCA-202ENST00000389301 RRP7BPQ9NSQ0 103 aa16.36■□□□□ 0.21
FANCA-202ENST00000389301 B4GALNT3Q6L9W6 998 aa16.35■□□□□ 0.21
FANCA-202ENST00000389301 RGS3P49796 1198 aa16.34■□□□□ 0.21
FANCA-202ENST00000389301 RBM19Q9Y4C8 960 aaKnown RBP16.33■□□□□ 0.21
FANCA-202ENST00000389301 CEP162Q5TB80 1403 aa16.33■□□□□ 0.2
FANCA-202ENST00000389301 SCRIBQ14160 1630 aa16.33■□□□□ 0.2
FANCA-202ENST00000389301 TPRNQ4KMQ1 711 aa16.33■□□□□ 0.2
FANCA-202ENST00000389301 ESF1Q9H501 851 aaKnown RBP16.33■□□□□ 0.2
FANCA-202ENST00000389301 TSPY4P0CV99 314 aa16.32■□□□□ 0.2
FANCA-202ENST00000389301 TSPY10P0CW01 314 aa16.32■□□□□ 0.2
FANCA-202ENST00000389301 CDK11BP21127 795 aaKnown RBP16.29■□□□□ 0.2
FANCA-202ENST00000389301 FTSJ3Q8IY81 847 aaKnown RBP16.26■□□□□ 0.19
FANCA-202ENST00000389301 CASC1Q6TDU7 716 aa16.25■□□□□ 0.19
FANCA-202ENST00000389301 ZRSR1Q15695 479 aaKnown RBP16.24■□□□□ 0.19
FANCA-202ENST00000389301 GOLGA3Q08378 1498 aa16.24■□□□□ 0.19
FANCA-202ENST00000389301 ZCCHC6Q5VYS8 1495 aaKnown RBP16.23■□□□□ 0.19
FANCA-202ENST00000389301 PLCB2Q00722 1185 aa16.23■□□□□ 0.19
FANCA-202ENST00000389301 SIN3AQ96ST3 1273 aa16.23■□□□□ 0.19
FANCA-202ENST00000389301 HSP90AB1P08238 724 aaKnown RBP16.22■□□□□ 0.19
FANCA-202ENST00000389301 KNSTRNQ9Y448 316 aa16.22■□□□□ 0.19
FANCA-202ENST00000389301 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
FANCA-202ENST00000389301 L1TD1Q5T7N2 865 aaKnown RBP16.21■□□□□ 0.18
FANCA-202ENST00000389301 CFAP53Q96M91 514 aa16.2■□□□□ 0.18
FANCA-202ENST00000389301 RGL3Q3MIN7 710 aa16.2■□□□□ 0.18
FANCA-202ENST00000389301 NEUROD2Q15784 382 aa16.19■□□□□ 0.18
FANCA-202ENST00000389301 FRAT1Q92837 279 aaPredicted RBP16.19■□□□□ 0.18
FANCA-202ENST00000389301 CARD11Q9BXL7 1154 aa16.19■□□□□ 0.18
FANCA-202ENST00000389301 ARID4BQ4LE39 1312 aaPredicted RBP16.16■□□□□ 0.18
FANCA-202ENST00000389301 SENP3Q9H4L4 574 aaPredicted RBP16.16■□□□□ 0.18
FANCA-202ENST00000389301 MSNP26038 577 aaKnown RBP16.15■□□□□ 0.18
FANCA-202ENST00000389301 TSHZ2Q9NRE2 1034 aa16.15■□□□□ 0.18
FANCA-202ENST00000389301 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.15■□□□□ 0.18
FANCA-202ENST00000389301 EEA1Q15075 1411 aa16.14■□□□□ 0.17
FANCA-202ENST00000389301 RSF1Q96T23 1441 aaPredicted RBP16.14■□□□□ 0.17
FANCA-202ENST00000389301 CDCA8Q53HL2 280 aa16.13■□□□□ 0.17
FANCA-202ENST00000389301 HSCBQ8IWL3 235 aa16.13■□□□□ 0.17
FANCA-202ENST00000389301 SPRYD3Q8NCJ5 442 aa16.13■□□□□ 0.17
FANCA-202ENST00000389301 CCER2I3L3R5 266 aa16.13■□□□□ 0.17
FANCA-202ENST00000389301 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
FANCA-202ENST00000389301 CC2D1BQ5T0F9 858 aaKnown RBP16.11■□□□□ 0.17
FANCA-202ENST00000389301 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
FANCA-202ENST00000389301 CHAF1AQ13111 956 aaPredicted RBP16.09■□□□□ 0.17
FANCA-202ENST00000389301 MAPK8IP3Q9UPT6 1336 aa16.09■□□□□ 0.17
FANCA-202ENST00000389301 GOLGA6L6A8MZA4 724 aa16.09■□□□□ 0.17
FANCA-202ENST00000389301 AMER1Q5JTC6 1135 aaPredicted RBP16.09■□□□□ 0.17
FANCA-202ENST00000389301 NPM1P06748 294 aaKnown RBP eCLIP16.08■□□□□ 0.17
FANCA-202ENST00000389301 MS4A1P11836 297 aa16.04■□□□□ 0.16
FANCA-202ENST00000389301 PLEKHG5O94827 1062 aa16.04■□□□□ 0.16
FANCA-202ENST00000389301 C14orf37Q86TY3 774 aa16.03■□□□□ 0.16
FANCA-202ENST00000389301 CHMP4BQ9H444 224 aaKnown RBP16.02■□□□□ 0.16
FANCA-202ENST00000389301 PNNQ9H307 717 aaKnown RBP16.02■□□□□ 0.16
FANCA-202ENST00000389301 NUDCQ9Y266 331 aa16.02■□□□□ 0.16
FANCA-202ENST00000389301 NRDCO43847 1150 aa16.02■□□□□ 0.15
FANCA-202ENST00000389301 GZF1Q9H116 711 aaPredicted RBP16.01■□□□□ 0.15
FANCA-202ENST00000389301 TAOK2Q9UL54 1235 aa16.01■□□□□ 0.15
FANCA-202ENST00000389301 ARID3AQ99856 593 aa16.01■□□□□ 0.15
FANCA-202ENST00000389301 CEP164Q9UPV0 1460 aa16■□□□□ 0.15
FANCA-202ENST00000389301 A0A0G2JS52 829 aa16■□□□□ 0.15
FANCA-202ENST00000389301 GOLGA6L4A6NEF3 574 aa15.99■□□□□ 0.15
FANCA-202ENST00000389301 PPP1R15AO75807 674 aaPredicted RBP15.99■□□□□ 0.15
FANCA-202ENST00000389301 IPO9Q96P70 1041 aaKnown RBP15.98■□□□□ 0.15
FANCA-202ENST00000389301 SLKQ9H2G2 1235 aaPredicted RBP15.98■□□□□ 0.15
FANCA-202ENST00000389301 TCERG1O14776 1098 aaKnown RBP15.98■□□□□ 0.15
FANCA-202ENST00000389301 DRC7Q8IY82 874 aa15.98■□□□□ 0.15
FANCA-202ENST00000389301 CFDP1Q9UEE9 299 aaPredicted RBP15.98■□□□□ 0.15
FANCA-202ENST00000389301 CCNB3Q8WWL7 1395 aa15.97■□□□□ 0.15
FANCA-202ENST00000389301 FGD1P98174 961 aa15.97■□□□□ 0.15
FANCA-202ENST00000389301 PLEKHD1A6NEE1 506 aa15.96■□□□□ 0.15
FANCA-202ENST00000389301 HSPA5P11021 654 aaKnown RBP15.96■□□□□ 0.15
FANCA-202ENST00000389301 U2SURPO15042 1029 aaKnown RBP15.96■□□□□ 0.15
FANCA-202ENST00000389301 KCNJ4P48050 445 aa15.96■□□□□ 0.15
FANCA-202ENST00000389301 WRNQ14191 1432 aaPredicted RBP eCLIP15.95■□□□□ 0.14
FANCA-202ENST00000389301 CHMP7Q8WUX9 453 aaPredicted RBP15.95■□□□□ 0.14
FANCA-202ENST00000389301 TIMELESSQ9UNS1 1208 aa15.95■□□□□ 0.14
FANCA-202ENST00000389301 GBP4Q96PP9 640 aa15.95■□□□□ 0.14
FANCA-202ENST00000389301 OS9Q13438 667 aaPredicted RBP15.95■□□□□ 0.14
FANCA-202ENST00000389301 KCNH8Q96L42 1107 aa15.95■□□□□ 0.14
FANCA-202ENST00000389301 NAP1L2Q9ULW6 460 aaPredicted RBP15.94■□□□□ 0.14
FANCA-202ENST00000389301 RCAN3Q9UKA8 241 aa15.93■□□□□ 0.14
FANCA-202ENST00000389301 GOLGA6L3A6NEY3 463 aa15.92■□□□□ 0.14
FANCA-202ENST00000389301 TMF1P82094 1093 aa15.92■□□□□ 0.14
FANCA-202ENST00000389301 TULP1O00294 542 aaPredicted RBP15.92■□□□□ 0.14
FANCA-202ENST00000389301 MCCP23508 829 aa15.92■□□□□ 0.14
FANCA-202ENST00000389301 PTMSP20962 102 aa15.91■□□□□ 0.14
FANCA-202ENST00000389301 KIAA2012Q0VF49 1180 aa15.9■□□□□ 0.14
FANCA-202ENST00000389301 DCAF11Q8TEB1 546 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms