RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 MSNP26038 577 aaKnown RBP16.23■□□□□ 0.19
SRGAP3-202ENST00000383836 ZRSR1Q15695 479 aaKnown RBP16.22■□□□□ 0.19
SRGAP3-202ENST00000383836 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.2■□□□□ 0.18
SRGAP3-202ENST00000383836 AMER1Q5JTC6 1135 aaPredicted RBP16.19■□□□□ 0.18
SRGAP3-202ENST00000383836 CASC1Q6TDU7 716 aa16.18■□□□□ 0.18
SRGAP3-202ENST00000383836 RBM19Q9Y4C8 960 aaKnown RBP16.18■□□□□ 0.18
SRGAP3-202ENST00000383836 GOLGA6L6A8MZA4 724 aa16.17■□□□□ 0.18
SRGAP3-202ENST00000383836 P3H3Q8IVL6 736 aa16.14■□□□□ 0.17
SRGAP3-202ENST00000383836 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
SRGAP3-202ENST00000383836 ESF1Q9H501 851 aaKnown RBP16.12■□□□□ 0.17
SRGAP3-202ENST00000383836 ZNF777Q9ULD5 760 aaPredicted RBP16.11■□□□□ 0.17
SRGAP3-202ENST00000383836 HIRIP3Q9BW71 556 aaPredicted RBP16.11■□□□□ 0.17
SRGAP3-202ENST00000383836 ARID4BQ4LE39 1312 aaPredicted RBP16.09■□□□□ 0.17
SRGAP3-202ENST00000383836 NRDCO43847 1150 aa16.09■□□□□ 0.17
SRGAP3-202ENST00000383836 HSP90AB1P08238 724 aaKnown RBP16.09■□□□□ 0.17
SRGAP3-202ENST00000383836 PLCB2Q00722 1185 aa16.09■□□□□ 0.17
SRGAP3-202ENST00000383836 PNNQ9H307 717 aaKnown RBP16.07■□□□□ 0.16
SRGAP3-202ENST00000383836 B4GALNT3Q6L9W6 998 aa16.05■□□□□ 0.16
SRGAP3-202ENST00000383836 ZCCHC6Q5VYS8 1495 aaKnown RBP16.05■□□□□ 0.16
SRGAP3-202ENST00000383836 TPRNQ4KMQ1 711 aa16.05■□□□□ 0.16
SRGAP3-202ENST00000383836 FTSJ3Q8IY81 847 aaKnown RBP16.04■□□□□ 0.16
SRGAP3-202ENST00000383836 ARID3CA6NKF2 412 aa16.03■□□□□ 0.16
SRGAP3-202ENST00000383836 RGS3P49796 1198 aa16.03■□□□□ 0.16
SRGAP3-202ENST00000383836 HSCBQ8IWL3 235 aa16.02■□□□□ 0.16
SRGAP3-202ENST00000383836 TNNT3P45378 269 aaPredicted RBP16.02■□□□□ 0.16
SRGAP3-202ENST00000383836 RSPH6AQ9H0K4 717 aa16.01■□□□□ 0.15
SRGAP3-202ENST00000383836 MYO15BQ96JP2 1530 aa16■□□□□ 0.15
SRGAP3-202ENST00000383836 EEA1Q15075 1411 aa16■□□□□ 0.15
SRGAP3-202ENST00000383836 PTMSP20962 102 aa16■□□□□ 0.15
SRGAP3-202ENST00000383836 HSP90AA2PQ14568 343 aaPredicted RBP15.99■□□□□ 0.15
SRGAP3-202ENST00000383836 KDM2AQ9Y2K7 1162 aa15.96■□□□□ 0.15
SRGAP3-202ENST00000383836 ARID3AQ99856 593 aa15.95■□□□□ 0.14
SRGAP3-202ENST00000383836 DRC7Q8IY82 874 aa15.94■□□□□ 0.14
SRGAP3-202ENST00000383836 KIAA2012Q0VF49 1180 aa15.94■□□□□ 0.14
SRGAP3-202ENST00000383836 CHGAP10645 457 aaKnown RBP15.93■□□□□ 0.14
SRGAP3-202ENST00000383836 CHIC2Q9UKJ5 165 aa15.93■□□□□ 0.14
SRGAP3-202ENST00000383836 TSHZ2Q9NRE2 1034 aa15.92■□□□□ 0.14
SRGAP3-202ENST00000383836 FBLN2P98095 1184 aa15.92■□□□□ 0.14
SRGAP3-202ENST00000383836 PLPPR3Q6T4P5 718 aa15.91■□□□□ 0.14
SRGAP3-202ENST00000383836 GBP4Q96PP9 640 aa15.9■□□□□ 0.14
SRGAP3-202ENST00000383836 CLIP1P30622 1438 aa15.89■□□□□ 0.13
SRGAP3-202ENST00000383836 CHMP4BQ9H444 224 aaKnown RBP15.89■□□□□ 0.13
SRGAP3-202ENST00000383836 STAG3Q9UJ98 1225 aa15.88■□□□□ 0.13
SRGAP3-202ENST00000383836 GOLGA6L3A6NEY3 463 aa15.88■□□□□ 0.13
SRGAP3-202ENST00000383836 GOLGA6L4A6NEF3 574 aa15.88■□□□□ 0.13
SRGAP3-202ENST00000383836 IPO9Q96P70 1041 aaKnown RBP15.88■□□□□ 0.13
SRGAP3-202ENST00000383836 VSIG10Q8N0Z9 540 aa15.87■□□□□ 0.13
SRGAP3-202ENST00000383836 MS4A1P11836 297 aa15.86■□□□□ 0.13
SRGAP3-202ENST00000383836 A0A0G2JS52 829 aa15.86■□□□□ 0.13
SRGAP3-202ENST00000383836 SPRYD3Q8NCJ5 442 aa15.86■□□□□ 0.13
SRGAP3-202ENST00000383836 CFAP53Q96M91 514 aa15.86■□□□□ 0.13
SRGAP3-202ENST00000383836 KNSTRNQ9Y448 316 aa15.86■□□□□ 0.13
SRGAP3-202ENST00000383836 SENP3-EIF4A1A0A087X0R7 540 aa15.86■□□□□ 0.13
SRGAP3-202ENST00000383836 GZF1Q9H116 711 aaPredicted RBP15.85■□□□□ 0.13
SRGAP3-202ENST00000383836 USP35Q9P2H5 1018 aa15.85■□□□□ 0.13
SRGAP3-202ENST00000383836 MTUS2Q5JR59 1369 aa15.85■□□□□ 0.13
SRGAP3-202ENST00000383836 CCER2I3L3R5 266 aa15.85■□□□□ 0.13
SRGAP3-202ENST00000383836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.12
SRGAP3-202ENST00000383836 CFAP44Q96MT7 982 aa15.83■□□□□ 0.12
SRGAP3-202ENST00000383836 FRAT1Q92837 279 aaPredicted RBP15.82■□□□□ 0.12
SRGAP3-202ENST00000383836 CEP162Q5TB80 1403 aa15.82■□□□□ 0.12
SRGAP3-202ENST00000383836 TCERG1O14776 1098 aaKnown RBP15.81■□□□□ 0.12
SRGAP3-202ENST00000383836 CDCA8Q53HL2 280 aa15.81■□□□□ 0.12
SRGAP3-202ENST00000383836 ZBTB7CA1YPR0 619 aa15.81■□□□□ 0.12
SRGAP3-202ENST00000383836 SYAP1Q96A49 352 aaPredicted RBP15.8■□□□□ 0.12
SRGAP3-202ENST00000383836 MCCP23508 829 aa15.79■□□□□ 0.12
SRGAP3-202ENST00000383836 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
SRGAP3-202ENST00000383836 GOLGA3Q08378 1498 aa15.78■□□□□ 0.12
SRGAP3-202ENST00000383836 GOLGA6L1Q8N7Z2 621 aa15.77■□□□□ 0.12
SRGAP3-202ENST00000383836 FGD1P98174 961 aa15.77■□□□□ 0.12
SRGAP3-202ENST00000383836 SLKQ9H2G2 1235 aaPredicted RBP15.76■□□□□ 0.11
SRGAP3-202ENST00000383836 PABPN1Q86U42 306 aaKnown RBP eCLIP15.75■□□□□ 0.11
SRGAP3-202ENST00000383836 TSPY4P0CV99 314 aa15.74■□□□□ 0.11
SRGAP3-202ENST00000383836 TSPY10P0CW01 314 aa15.74■□□□□ 0.11
SRGAP3-202ENST00000383836 KCNJ4P48050 445 aa15.74■□□□□ 0.11
SRGAP3-202ENST00000383836 NACADO15069 1562 aa15.74■□□□□ 0.11
SRGAP3-202ENST00000383836 MAPK8IP3Q9UPT6 1336 aa15.73■□□□□ 0.11
SRGAP3-202ENST00000383836 RRP7BPQ9NSQ0 103 aa15.72■□□□□ 0.11
SRGAP3-202ENST00000383836 SETQ01105 290 aaPredicted RBP15.72■□□□□ 0.11
SRGAP3-202ENST00000383836 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
SRGAP3-202ENST00000383836 GSE1Q14687 1217 aa15.71■□□□□ 0.11
SRGAP3-202ENST00000383836 NEUROD2Q15784 382 aa15.71■□□□□ 0.11
SRGAP3-202ENST00000383836 CARD11Q9BXL7 1154 aa15.71■□□□□ 0.1
SRGAP3-202ENST00000383836 RB1CC1Q8TDY2 1594 aa15.69■□□□□ 0.1
SRGAP3-202ENST00000383836 NAP1L2Q9ULW6 460 aaPredicted RBP15.68■□□□□ 0.1
SRGAP3-202ENST00000383836 PHF14O94880 888 aa15.68■□□□□ 0.1
SRGAP3-202ENST00000383836 NOC3LQ8WTT2 800 aaKnown RBP15.67■□□□□ 0.1
SRGAP3-202ENST00000383836 TULP1O00294 542 aaPredicted RBP15.66■□□□□ 0.1
SRGAP3-202ENST00000383836 NUDCQ9Y266 331 aa15.66■□□□□ 0.1
SRGAP3-202ENST00000383836 DDX11L8A8MPP1 907 aa15.66■□□□□ 0.1
SRGAP3-202ENST00000383836 OS9Q13438 667 aaPredicted RBP15.65■□□□□ 0.1
SRGAP3-202ENST00000383836 TAOK2Q9UL54 1235 aa15.65■□□□□ 0.1
SRGAP3-202ENST00000383836 CALD1Q05682 793 aaKnown RBP15.65■□□□□ 0.1
SRGAP3-202ENST00000383836 ABCC9O60706 1549 aa15.64■□□□□ 0.09
SRGAP3-202ENST00000383836 RCAN3Q9UKA8 241 aa15.64■□□□□ 0.09
SRGAP3-202ENST00000383836 TPM4P67936 248 aa15.64■□□□□ 0.09
SRGAP3-202ENST00000383836 CC2D1BQ5T0F9 858 aaKnown RBP15.64■□□□□ 0.09
SRGAP3-202ENST00000383836 ZNF771Q7L3S4 317 aaPredicted RBP15.64■□□□□ 0.09
SRGAP3-202ENST00000383836 TIMELESSQ9UNS1 1208 aa15.63■□□□□ 0.09
SRGAP3-202ENST00000383836 HTATSF1O43719 755 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms