RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 TRIM26Q12899 539 aaPredicted RBP31.8■■■□□ 2.68
CPNE9-202ENST00000383831 PPARGC1BQ86YN6 1023 aaKnown RBP31.79■■■□□ 2.68
CPNE9-202ENST00000383831 SNAPC4Q5SXM2 1469 aa31.78■■■□□ 2.68
CPNE9-202ENST00000383831 MAGI1Q96QZ7 1491 aaPredicted RBP31.69■■■□□ 2.66
CPNE9-202ENST00000383831 EFCAB5A4FU69 1503 aa31.66■■■□□ 2.66
CPNE9-202ENST00000383831 GRIN2AQ12879 1464 aa31.6■■■□□ 2.65
CPNE9-202ENST00000383831 SYNJ2O15056 1496 aa31.59■■■□□ 2.65
CPNE9-202ENST00000383831 SAMD9Q5K651 1589 aa31.55■■■□□ 2.64
CPNE9-202ENST00000383831 IQGAP2Q13576 1575 aa31.55■■■□□ 2.64
CPNE9-202ENST00000383831 P3H3Q8IVL6 736 aa31.54■■■□□ 2.64
CPNE9-202ENST00000383831 TTBK1Q5TCY1 1321 aaPredicted RBP31.54■■■□□ 2.64
CPNE9-202ENST00000383831 FHOD3Q2V2M9 1422 aa31.54■■■□□ 2.64
CPNE9-202ENST00000383831 APLP2Q06481 763 aa31.53■■■□□ 2.64
CPNE9-202ENST00000383831 CHMP7Q8WUX9 453 aaPredicted RBP31.49■■■□□ 2.63
CPNE9-202ENST00000383831 KIAA0586Q9BVV6 1533 aa31.46■■■□□ 2.63
CPNE9-202ENST00000383831 CEP170Q5SW79 1584 aa31.43■■■□□ 2.62
CPNE9-202ENST00000383831 FBLN2P98095 1184 aa31.42■■■□□ 2.62
CPNE9-202ENST00000383831 PCF11O94913 1555 aaKnown RBP31.41■■■□□ 2.62
CPNE9-202ENST00000383831 UGGT2Q9NYU1 1516 aa31.39■■■□□ 2.62
CPNE9-202ENST00000383831 NUP160Q12769 1436 aa31.36■■■□□ 2.61
CPNE9-202ENST00000383831 FMN1Q68DA7 1419 aa31.36■■■□□ 2.61
CPNE9-202ENST00000383831 FYCO1Q9BQS8 1478 aa31.32■■■□□ 2.6
CPNE9-202ENST00000383831 CASKIN1Q8WXD9 1431 aa31.32■■■□□ 2.6
CPNE9-202ENST00000383831 MAP3K1Q13233 1512 aa31.31■■■□□ 2.6
CPNE9-202ENST00000383831 KANK4Q5T7N3 995 aaPredicted RBP31.3■■■□□ 2.6
CPNE9-202ENST00000383831 TIAM1Q13009 1591 aa31.3■■■□□ 2.6
CPNE9-202ENST00000383831 CHD1O14646 1710 aa31.26■■■□□ 2.59
CPNE9-202ENST00000383831 DISP1Q96F81 1524 aa31.25■■■□□ 2.59
CPNE9-202ENST00000383831 KIAA0556O60303 1618 aa31.25■■■□□ 2.59
CPNE9-202ENST00000383831 CFAP43Q8NDM7 1665 aa31.24■■■□□ 2.59
CPNE9-202ENST00000383831 ATP1B4Q9UN42 357 aaPredicted RBP31.2■■■□□ 2.58
CPNE9-202ENST00000383831 LRRC9Q6ZRR7 1453 aa31.14■■■□□ 2.58
CPNE9-202ENST00000383831 LRRIQ1Q96JM4 1722 aa31.12■■■□□ 2.57
CPNE9-202ENST00000383831 JPH4Q96JJ6 628 aa31.11■■■□□ 2.57
CPNE9-202ENST00000383831 HECW1Q76N89 1606 aa31.06■■■□□ 2.56
CPNE9-202ENST00000383831 CARMIL2Q6F5E8 1435 aa31.04■■■□□ 2.56
CPNE9-202ENST00000383831 CCDC18Q5T9S5 1454 aa30.98■■■□□ 2.55
CPNE9-202ENST00000383831 RRBP1Q9P2E9 1410 aaKnown RBP30.95■■■□□ 2.54
CPNE9-202ENST00000383831 SHROOM2Q13796 1616 aa30.94■■■□□ 2.54
CPNE9-202ENST00000383831 RAPGEF6Q8TEU7 1601 aa30.94■■■□□ 2.54
CPNE9-202ENST00000383831 HRCP23327 699 aa30.94■■■□□ 2.54
CPNE9-202ENST00000383831 EPRSP07814 1512 aaKnown RBP30.93■■■□□ 2.54
CPNE9-202ENST00000383831 PRG4Q92954 1404 aaPredicted RBP30.93■■■□□ 2.54
CPNE9-202ENST00000383831 CLASP1Q7Z460 1538 aa30.89■■■□□ 2.53
CPNE9-202ENST00000383831 MTUS2Q5JR59 1369 aa30.89■■■□□ 2.53
CPNE9-202ENST00000383831 CDK13Q14004 1512 aaKnown RBP30.88■■■□□ 2.53
CPNE9-202ENST00000383831 PHLDB1Q86UU1 1377 aa30.88■■■□□ 2.53
CPNE9-202ENST00000383831 NUP153P49790 1475 aaKnown RBP30.87■■■□□ 2.53
CPNE9-202ENST00000383831 EHBP1L1Q8N3D4 1523 aa30.86■■■□□ 2.53
CPNE9-202ENST00000383831 MAGI3Q5TCQ9 1506 aa30.85■■■□□ 2.53
CPNE9-202ENST00000383831 PLB1Q6P1J6 1458 aa30.85■■■□□ 2.53
CPNE9-202ENST00000383831 CCNB3Q8WWL7 1395 aa30.84■■■□□ 2.53
CPNE9-202ENST00000383831 HNRNPUL2Q1KMD3 747 aaKnown RBP30.82■■■□□ 2.52
CPNE9-202ENST00000383831 ARID3CA6NKF2 412 aa30.8■■■□□ 2.52
CPNE9-202ENST00000383831 ABCA8O94911 1581 aa30.78■■■□□ 2.52
CPNE9-202ENST00000383831 SUPT6HQ7KZ85 1726 aaKnown RBP30.78■■■□□ 2.52
CPNE9-202ENST00000383831 ERCC6L2Q5T890 1561 aa30.75■■■□□ 2.51
CPNE9-202ENST00000383831 NCOA2Q15596 1464 aa30.75■■■□□ 2.51
CPNE9-202ENST00000383831 PTPRGP23470 1445 aa30.73■■■□□ 2.51
CPNE9-202ENST00000383831 ARHGEF11O15085 1522 aa30.7■■■□□ 2.51
CPNE9-202ENST00000383831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.66■■■□□ 2.5
CPNE9-202ENST00000383831 FGD6Q6ZV73 1430 aa30.64■■■□□ 2.5
CPNE9-202ENST00000383831 MYOM3Q5VTT5 1437 aa30.62■■■□□ 2.49
CPNE9-202ENST00000383831 CDK11AQ9UQ88 783 aaPredicted RBP30.6■■■□□ 2.49
CPNE9-202ENST00000383831 FAM50AQ14320 339 aaKnown RBP30.59■■■□□ 2.49
CPNE9-202ENST00000383831 ATP10BO94823 1461 aa30.57■■■□□ 2.48
CPNE9-202ENST00000383831 UACAQ9BZF9 1416 aa30.57■■■□□ 2.48
CPNE9-202ENST00000383831 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.57■■■□□ 2.48
CPNE9-202ENST00000383831 TROQ12816 1431 aaPredicted RBP30.55■■■□□ 2.48
CPNE9-202ENST00000383831 ITGAEP38570 1179 aa30.55■■■□□ 2.48
CPNE9-202ENST00000383831 CCER1Q8TC90 406 aaPredicted RBP30.54■■■□□ 2.48
CPNE9-202ENST00000383831 OSCARQ8IYS5 282 aa30.51■■■□□ 2.47
CPNE9-202ENST00000383831 ZEB1P37275 1124 aaPredicted RBP30.5■■■□□ 2.47
CPNE9-202ENST00000383831 ADCY10Q96PN6 1610 aa30.49■■■□□ 2.47
CPNE9-202ENST00000383831 PTPN23Q9H3S7 1636 aa30.49■■■□□ 2.47
CPNE9-202ENST00000383831 ABCC2Q92887 1545 aa30.48■■■□□ 2.47
CPNE9-202ENST00000383831 KIF14Q15058 1648 aa30.45■■■□□ 2.46
CPNE9-202ENST00000383831 TCOF1Q13428 1488 aaKnown RBP30.43■■■□□ 2.46
CPNE9-202ENST00000383831 MIA2Q96PC5 1412 aa30.43■■■□□ 2.46
CPNE9-202ENST00000383831 PLEKHD1A6NEE1 506 aa30.42■■■□□ 2.46
CPNE9-202ENST00000383831 UHRF1BP1LA0JNW5 1464 aa30.39■■■□□ 2.46
CPNE9-202ENST00000383831 ITSN2Q9NZM3 1697 aa30.33■■■□□ 2.45
CPNE9-202ENST00000383831 PTPRKQ15262 1439 aa30.32■■■□□ 2.44
CPNE9-202ENST00000383831 ABCC10Q5T3U5 1492 aa30.31■■■□□ 2.44
CPNE9-202ENST00000383831 GPATCH8Q9UKJ3 1502 aaKnown RBP30.3■■■□□ 2.44
CPNE9-202ENST00000383831 ZCCHC11Q5TAX3 1644 aaKnown RBP30.29■■■□□ 2.44
CPNE9-202ENST00000383831 SETD5Q9C0A6 1442 aa30.29■■■□□ 2.44
CPNE9-202ENST00000383831 KDM5BQ9UGL1 1544 aa30.28■■■□□ 2.44
CPNE9-202ENST00000383831 RAB3GAP2Q9H2M9 1393 aa30.27■■■□□ 2.44
CPNE9-202ENST00000383831 CDC42BPAQ5VT25 1732 aa30.24■■■□□ 2.43
CPNE9-202ENST00000383831 DHX57Q6P158 1386 aaKnown RBP30.22■■■□□ 2.43
CPNE9-202ENST00000383831 CFDP1Q9UEE9 299 aaPredicted RBP30.21■■■□□ 2.43
CPNE9-202ENST00000383831 ZNF644Q9H582 1327 aaPredicted RBP30.2■■■□□ 2.42
CPNE9-202ENST00000383831 CAMSAP2Q08AD1 1489 aa30.19■■■□□ 2.42
CPNE9-202ENST00000383831 HFM1A2PYH4 1435 aa30.17■■■□□ 2.42
CPNE9-202ENST00000383831 DNMT1P26358 1616 aaKnown RBP30.16■■■□□ 2.42
CPNE9-202ENST00000383831 DAPK1P53355 1430 aa30.14■■■□□ 2.41
CPNE9-202ENST00000383831 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.12■■■□□ 2.41
CPNE9-202ENST00000383831 TTC37Q6PGP7 1564 aa30.12■■■□□ 2.41
CPNE9-202ENST00000383831 ABCC5O15440 1437 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms