RNA–Protein interactions for RNA: ENST00000382862.7

MSLN-201, Transcript of mesothelin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MSLN, Length 2,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-201ENST00000382862 VPS8Q8N3P4 1428 aa31.59■■■□□ 2.65
MSLN-201ENST00000382862 MAGI1Q96QZ7 1491 aaPredicted RBP31.55■■■□□ 2.64
MSLN-201ENST00000382862 GRIN2AQ12879 1464 aa31.5■■■□□ 2.63
MSLN-201ENST00000382862 SYNJ2O15056 1496 aa31.47■■■□□ 2.63
MSLN-201ENST00000382862 P3H3Q8IVL6 736 aa31.42■■■□□ 2.62
MSLN-201ENST00000382862 PCGF6Q9BYE7 350 aa31.4■■■□□ 2.62
MSLN-201ENST00000382862 IQGAP2Q13576 1575 aa31.39■■■□□ 2.62
MSLN-201ENST00000382862 FHOD3Q2V2M9 1422 aa31.38■■■□□ 2.61
MSLN-201ENST00000382862 EFCAB5A4FU69 1503 aa31.38■■■□□ 2.61
MSLN-201ENST00000382862 SAMD9Q5K651 1589 aa31.38■■■□□ 2.61
MSLN-201ENST00000382862 CHMP7Q8WUX9 453 aaPredicted RBP31.37■■■□□ 2.61
MSLN-201ENST00000382862 CEP170Q5SW79 1584 aa31.37■■■□□ 2.61
MSLN-201ENST00000382862 FBLN2P98095 1184 aa31.37■■■□□ 2.61
MSLN-201ENST00000382862 TTBK1Q5TCY1 1321 aaPredicted RBP31.36■■■□□ 2.61
MSLN-201ENST00000382862 TRIM26Q12899 539 aaPredicted RBP31.3■■■□□ 2.6
MSLN-201ENST00000382862 KIAA0586Q9BVV6 1533 aa31.29■■■□□ 2.6
MSLN-201ENST00000382862 CHD1O14646 1710 aa31.28■■■□□ 2.6
MSLN-201ENST00000382862 NUP160Q12769 1436 aa31.25■■■□□ 2.59
MSLN-201ENST00000382862 PCF11O94913 1555 aaKnown RBP31.24■■■□□ 2.59
MSLN-201ENST00000382862 UGGT2Q9NYU1 1516 aa31.22■■■□□ 2.59
MSLN-201ENST00000382862 DISP1Q96F81 1524 aa31.14■■■□□ 2.58
MSLN-201ENST00000382862 APLP2Q06481 763 aa31.12■■■□□ 2.57
MSLN-201ENST00000382862 KIAA0556O60303 1618 aa31.11■■■□□ 2.57
MSLN-201ENST00000382862 KANK4Q5T7N3 995 aaPredicted RBP31.1■■■□□ 2.57
MSLN-201ENST00000382862 FMN1Q68DA7 1419 aa31.08■■■□□ 2.57
MSLN-201ENST00000382862 CASKIN1Q8WXD9 1431 aa31.06■■■□□ 2.56
MSLN-201ENST00000382862 TIAM1Q13009 1591 aa31.06■■■□□ 2.56
MSLN-201ENST00000382862 FYCO1Q9BQS8 1478 aa31.06■■■□□ 2.56
MSLN-201ENST00000382862 LRRIQ1Q96JM4 1722 aa31.05■■■□□ 2.56
MSLN-201ENST00000382862 CFAP43Q8NDM7 1665 aa31.02■■■□□ 2.56
MSLN-201ENST00000382862 ATP1B4Q9UN42 357 aaPredicted RBP31■■■□□ 2.55
MSLN-201ENST00000382862 JPH4Q96JJ6 628 aa30.99■■■□□ 2.55
MSLN-201ENST00000382862 MAP3K1Q13233 1512 aa30.96■■■□□ 2.55
MSLN-201ENST00000382862 LRRC9Q6ZRR7 1453 aa30.89■■■□□ 2.54
MSLN-201ENST00000382862 SHROOM2Q13796 1616 aa30.87■■■□□ 2.53
MSLN-201ENST00000382862 CLASP1Q7Z460 1538 aa30.85■■■□□ 2.53
MSLN-201ENST00000382862 PRG4Q92954 1404 aaPredicted RBP30.84■■■□□ 2.53
MSLN-201ENST00000382862 CARMIL2Q6F5E8 1435 aa30.83■■■□□ 2.53
MSLN-201ENST00000382862 HECW1Q76N89 1606 aa30.83■■■□□ 2.53
MSLN-201ENST00000382862 ERCC6L2Q5T890 1561 aa30.79■■■□□ 2.52
MSLN-201ENST00000382862 RAPGEF6Q8TEU7 1601 aa30.78■■■□□ 2.52
MSLN-201ENST00000382862 CDK13Q14004 1512 aaKnown RBP30.77■■■□□ 2.52
MSLN-201ENST00000382862 PLB1Q6P1J6 1458 aa30.76■■■□□ 2.51
MSLN-201ENST00000382862 EPRSP07814 1512 aaKnown RBP30.75■■■□□ 2.51
MSLN-201ENST00000382862 ARID3CA6NKF2 412 aa30.75■■■□□ 2.51
MSLN-201ENST00000382862 MAGI3Q5TCQ9 1506 aa30.74■■■□□ 2.51
MSLN-201ENST00000382862 NUP153P49790 1475 aaKnown RBP30.73■■■□□ 2.51
MSLN-201ENST00000382862 CCDC18Q5T9S5 1454 aa30.7■■■□□ 2.51
MSLN-201ENST00000382862 PHLDB1Q86UU1 1377 aa30.67■■■□□ 2.5
MSLN-201ENST00000382862 ABCA8O94911 1581 aa30.65■■■□□ 2.5
MSLN-201ENST00000382862 MTUS2Q5JR59 1369 aa30.63■■■□□ 2.49
MSLN-201ENST00000382862 RRBP1Q9P2E9 1410 aaKnown RBP30.63■■■□□ 2.49
MSLN-201ENST00000382862 EHBP1L1Q8N3D4 1523 aa30.61■■■□□ 2.49
MSLN-201ENST00000382862 PTPRGP23470 1445 aa30.59■■■□□ 2.49
MSLN-201ENST00000382862 SUPT6HQ7KZ85 1726 aaKnown RBP30.54■■■□□ 2.48
MSLN-201ENST00000382862 HNRNPUL2Q1KMD3 747 aaKnown RBP30.53■■■□□ 2.48
MSLN-201ENST00000382862 NCOA2Q15596 1464 aa30.53■■■□□ 2.48
MSLN-201ENST00000382862 CCNB3Q8WWL7 1395 aa30.53■■■□□ 2.48
MSLN-201ENST00000382862 ARHGEF11O15085 1522 aa30.49■■■□□ 2.47
MSLN-201ENST00000382862 OSCARQ8IYS5 282 aa30.47■■■□□ 2.47
MSLN-201ENST00000382862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.46■■■□□ 2.47
MSLN-201ENST00000382862 ATP10BO94823 1461 aa30.44■■■□□ 2.46
MSLN-201ENST00000382862 UACAQ9BZF9 1416 aa30.43■■■□□ 2.46
MSLN-201ENST00000382862 HRCP23327 699 aa30.41■■■□□ 2.46
MSLN-201ENST00000382862 FGD6Q6ZV73 1430 aa30.39■■■□□ 2.46
MSLN-201ENST00000382862 MYOM3Q5VTT5 1437 aa30.37■■■□□ 2.45
MSLN-201ENST00000382862 ABCC2Q92887 1545 aa30.36■■■□□ 2.45
MSLN-201ENST00000382862 KIF14Q15058 1648 aa30.36■■■□□ 2.45
MSLN-201ENST00000382862 TROQ12816 1431 aaPredicted RBP30.35■■■□□ 2.45
MSLN-201ENST00000382862 FAM50AQ14320 339 aaKnown RBP30.33■■■□□ 2.45
MSLN-201ENST00000382862 ITGAEP38570 1179 aa30.32■■■□□ 2.44
MSLN-201ENST00000382862 CDK11AQ9UQ88 783 aaPredicted RBP30.3■■■□□ 2.44
MSLN-201ENST00000382862 ADCY10Q96PN6 1610 aa30.3■■■□□ 2.44
MSLN-201ENST00000382862 PTPN23Q9H3S7 1636 aa30.27■■■□□ 2.44
MSLN-201ENST00000382862 UHRF1BP1LA0JNW5 1464 aa30.23■■■□□ 2.43
MSLN-201ENST00000382862 ZCCHC11Q5TAX3 1644 aaKnown RBP30.22■■■□□ 2.43
MSLN-201ENST00000382862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.21■■■□□ 2.43
MSLN-201ENST00000382862 PLEKHD1A6NEE1 506 aa30.2■■■□□ 2.42
MSLN-201ENST00000382862 TCOF1Q13428 1488 aaKnown RBP30.17■■■□□ 2.42
MSLN-201ENST00000382862 KDM5BQ9UGL1 1544 aa30.16■■■□□ 2.42
MSLN-201ENST00000382862 ABCC10Q5T3U5 1492 aa30.15■■■□□ 2.42
MSLN-201ENST00000382862 PTPRKQ15262 1439 aa30.14■■■□□ 2.42
MSLN-201ENST00000382862 MIA2Q96PC5 1412 aa30.13■■■□□ 2.41
MSLN-201ENST00000382862 GPATCH8Q9UKJ3 1502 aaKnown RBP30.13■■■□□ 2.41
MSLN-201ENST00000382862 CDC42BPAQ5VT25 1732 aa30.13■■■□□ 2.41
MSLN-201ENST00000382862 ITSN2Q9NZM3 1697 aa30.1■■■□□ 2.41
MSLN-201ENST00000382862 CCER1Q8TC90 406 aaPredicted RBP30.1■■■□□ 2.41
MSLN-201ENST00000382862 ZNF644Q9H582 1327 aaPredicted RBP30.09■■■□□ 2.41
MSLN-201ENST00000382862 TTC37Q6PGP7 1564 aa30.05■■■□□ 2.4
MSLN-201ENST00000382862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.01■■■□□ 2.39
MSLN-201ENST00000382862 CAMSAP2Q08AD1 1489 aa30■■■□□ 2.39
MSLN-201ENST00000382862 RAB3GAP2Q9H2M9 1393 aa29.99■■■□□ 2.39
MSLN-201ENST00000382862 CFDP1Q9UEE9 299 aaPredicted RBP29.99■■■□□ 2.39
MSLN-201ENST00000382862 CDC42BPBQ9Y5S2 1711 aa29.98■■■□□ 2.39
MSLN-201ENST00000382862 KCNH8Q96L42 1107 aa29.96■■■□□ 2.39
MSLN-201ENST00000382862 SETD5Q9C0A6 1442 aa29.96■■■□□ 2.39
MSLN-201ENST00000382862 RIMBP3CA6NJZ7 1639 aa29.96■■■□□ 2.39
MSLN-201ENST00000382862 RIMBP3BA6NNM3 1639 aa29.96■■■□□ 2.39
MSLN-201ENST00000382862 PREX2Q70Z35 1606 aa29.96■■■□□ 2.39
MSLN-201ENST00000382862 RIMBP3Q9UFD9 1639 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms