RNA–Protein interactions for RNA: ENST00000382490.9

MSRA-202, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-202ENST00000382490 TRIM26Q12899 539 aaPredicted RBP20.55■□□□□ 0.88
MSRA-202ENST00000382490 PPARGC1BQ86YN6 1023 aaKnown RBP20.53■□□□□ 0.88
MSRA-202ENST00000382490 CTTNBP2Q8WZ74 1663 aa20.52■□□□□ 0.88
MSRA-202ENST00000382490 PCGF6Q9BYE7 350 aa20.5■□□□□ 0.87
MSRA-202ENST00000382490 SYNJ2O15056 1496 aa20.49■□□□□ 0.87
MSRA-202ENST00000382490 GRIN2AQ12879 1464 aa20.48■□□□□ 0.87
MSRA-202ENST00000382490 CHMP7Q8WUX9 453 aaPredicted RBP20.48■□□□□ 0.87
MSRA-202ENST00000382490 EFCAB5A4FU69 1503 aa20.45■□□□□ 0.86
MSRA-202ENST00000382490 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
MSRA-202ENST00000382490 KIAA0586Q9BVV6 1533 aa20.42■□□□□ 0.86
MSRA-202ENST00000382490 FBLN2P98095 1184 aa20.41■□□□□ 0.86
MSRA-202ENST00000382490 APLP2Q06481 763 aa20.4■□□□□ 0.86
MSRA-202ENST00000382490 IQGAP2Q13576 1575 aa20.39■□□□□ 0.85
MSRA-202ENST00000382490 FHOD3Q2V2M9 1422 aa20.39■□□□□ 0.85
MSRA-202ENST00000382490 SAMD9Q5K651 1589 aa20.38■□□□□ 0.85
MSRA-202ENST00000382490 NUP160Q12769 1436 aa20.36■□□□□ 0.85
MSRA-202ENST00000382490 UGGT2Q9NYU1 1516 aa20.35■□□□□ 0.85
MSRA-202ENST00000382490 CEP170Q5SW79 1584 aa20.34■□□□□ 0.85
MSRA-202ENST00000382490 TTBK1Q5TCY1 1321 aaPredicted RBP20.32■□□□□ 0.84
MSRA-202ENST00000382490 FMN1Q68DA7 1419 aa20.3■□□□□ 0.84
MSRA-202ENST00000382490 KANK4Q5T7N3 995 aaPredicted RBP20.3■□□□□ 0.84
MSRA-202ENST00000382490 CASKIN1Q8WXD9 1431 aa20.28■□□□□ 0.84
MSRA-202ENST00000382490 MAP3K1Q13233 1512 aa20.27■□□□□ 0.84
MSRA-202ENST00000382490 JPH4Q96JJ6 628 aa20.27■□□□□ 0.84
MSRA-202ENST00000382490 DISP1Q96F81 1524 aa20.25■□□□□ 0.83
MSRA-202ENST00000382490 PCF11O94913 1555 aaKnown RBP20.24■□□□□ 0.83
MSRA-202ENST00000382490 FYCO1Q9BQS8 1478 aa20.23■□□□□ 0.83
MSRA-202ENST00000382490 ATP1B4Q9UN42 357 aaPredicted RBP20.21■□□□□ 0.83
MSRA-202ENST00000382490 CHD1O14646 1710 aa20.19■□□□□ 0.82
MSRA-202ENST00000382490 TIAM1Q13009 1591 aa20.19■□□□□ 0.82
MSRA-202ENST00000382490 KIAA0556O60303 1618 aa20.18■□□□□ 0.82
MSRA-202ENST00000382490 CARMIL2Q6F5E8 1435 aa20.14■□□□□ 0.81
MSRA-202ENST00000382490 LRRC9Q6ZRR7 1453 aa20.14■□□□□ 0.81
MSRA-202ENST00000382490 CFAP43Q8NDM7 1665 aa20.1■□□□□ 0.81
MSRA-202ENST00000382490 PRG4Q92954 1404 aaPredicted RBP20.09■□□□□ 0.81
MSRA-202ENST00000382490 SHROOM2Q13796 1616 aa20.04■□□□□ 0.8
MSRA-202ENST00000382490 CLASP1Q7Z460 1538 aa20.03■□□□□ 0.8
MSRA-202ENST00000382490 LRRIQ1Q96JM4 1722 aa20.03■□□□□ 0.8
MSRA-202ENST00000382490 HECW1Q76N89 1606 aa20.03■□□□□ 0.8
MSRA-202ENST00000382490 CCDC18Q5T9S5 1454 aa20.02■□□□□ 0.8
MSRA-202ENST00000382490 EPRSP07814 1512 aaKnown RBP20.02■□□□□ 0.8
MSRA-202ENST00000382490 RRBP1Q9P2E9 1410 aaKnown RBP20.01■□□□□ 0.79
MSRA-202ENST00000382490 MTUS2Q5JR59 1369 aa19.99■□□□□ 0.79
MSRA-202ENST00000382490 NUP153P49790 1475 aaKnown RBP19.99■□□□□ 0.79
MSRA-202ENST00000382490 RAPGEF6Q8TEU7 1601 aa19.98■□□□□ 0.79
MSRA-202ENST00000382490 PLB1Q6P1J6 1458 aa19.98■□□□□ 0.79
MSRA-202ENST00000382490 PTPRGP23470 1445 aa19.98■□□□□ 0.79
MSRA-202ENST00000382490 PHLDB1Q86UU1 1377 aa19.97■□□□□ 0.79
MSRA-202ENST00000382490 CDK13Q14004 1512 aaKnown RBP19.95■□□□□ 0.78
MSRA-202ENST00000382490 ARID3CA6NKF2 412 aa19.94■□□□□ 0.78
MSRA-202ENST00000382490 MAGI3Q5TCQ9 1506 aa19.94■□□□□ 0.78
MSRA-202ENST00000382490 ABCA8O94911 1581 aa19.94■□□□□ 0.78
MSRA-202ENST00000382490 CCNB3Q8WWL7 1395 aa19.93■□□□□ 0.78
MSRA-202ENST00000382490 HRCP23327 699 aa19.92■□□□□ 0.78
MSRA-202ENST00000382490 HNRNPUL2Q1KMD3 747 aaKnown RBP19.92■□□□□ 0.78
MSRA-202ENST00000382490 ERCC6L2Q5T890 1561 aa19.92■□□□□ 0.78
MSRA-202ENST00000382490 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
MSRA-202ENST00000382490 EHBP1L1Q8N3D4 1523 aa19.91■□□□□ 0.78
MSRA-202ENST00000382490 NCOA2Q15596 1464 aa19.88■□□□□ 0.77
MSRA-202ENST00000382490 CDK11AQ9UQ88 783 aaPredicted RBP19.88■□□□□ 0.77
MSRA-202ENST00000382490 ARHGEF11O15085 1522 aa19.87■□□□□ 0.77
MSRA-202ENST00000382490 ATP10BO94823 1461 aa19.86■□□□□ 0.77
MSRA-202ENST00000382490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.86■□□□□ 0.77
MSRA-202ENST00000382490 UACAQ9BZF9 1416 aa19.85■□□□□ 0.77
MSRA-202ENST00000382490 SUPT6HQ7KZ85 1726 aaKnown RBP19.83■□□□□ 0.77
MSRA-202ENST00000382490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.82■□□□□ 0.76
MSRA-202ENST00000382490 MYOM3Q5VTT5 1437 aa19.81■□□□□ 0.76
MSRA-202ENST00000382490 TROQ12816 1431 aaPredicted RBP19.81■□□□□ 0.76
MSRA-202ENST00000382490 FGD6Q6ZV73 1430 aa19.81■□□□□ 0.76
MSRA-202ENST00000382490 FAM50AQ14320 339 aaKnown RBP19.79■□□□□ 0.76
MSRA-202ENST00000382490 PLEKHD1A6NEE1 506 aa19.78■□□□□ 0.76
MSRA-202ENST00000382490 UHRF1BP1LA0JNW5 1464 aa19.75■□□□□ 0.75
MSRA-202ENST00000382490 ABCC2Q92887 1545 aa19.74■□□□□ 0.75
MSRA-202ENST00000382490 ITGAEP38570 1179 aa19.74■□□□□ 0.75
MSRA-202ENST00000382490 MIA2Q96PC5 1412 aa19.71■□□□□ 0.75
MSRA-202ENST00000382490 TCOF1Q13428 1488 aaKnown RBP19.7■□□□□ 0.74
MSRA-202ENST00000382490 ZEB1P37275 1124 aaPredicted RBP19.69■□□□□ 0.74
MSRA-202ENST00000382490 CCER1Q8TC90 406 aaPredicted RBP19.69■□□□□ 0.74
MSRA-202ENST00000382490 ADCY10Q96PN6 1610 aa19.68■□□□□ 0.74
MSRA-202ENST00000382490 PTPN23Q9H3S7 1636 aa19.67■□□□□ 0.74
MSRA-202ENST00000382490 KDM5BQ9UGL1 1544 aa19.66■□□□□ 0.74
MSRA-202ENST00000382490 ABCC10Q5T3U5 1492 aa19.64■□□□□ 0.74
MSRA-202ENST00000382490 GPATCH8Q9UKJ3 1502 aaKnown RBP19.64■□□□□ 0.74
MSRA-202ENST00000382490 KIF14Q15058 1648 aa19.64■□□□□ 0.73
MSRA-202ENST00000382490 PTPRKQ15262 1439 aa19.63■□□□□ 0.73
MSRA-202ENST00000382490 CFDP1Q9UEE9 299 aaPredicted RBP19.6■□□□□ 0.73
MSRA-202ENST00000382490 SETD5Q9C0A6 1442 aa19.6■□□□□ 0.73
MSRA-202ENST00000382490 ZNF644Q9H582 1327 aaPredicted RBP19.6■□□□□ 0.73
MSRA-202ENST00000382490 ZCCHC11Q5TAX3 1644 aaKnown RBP19.57■□□□□ 0.72
MSRA-202ENST00000382490 RAB3GAP2Q9H2M9 1393 aa19.56■□□□□ 0.72
MSRA-202ENST00000382490 ITSN2Q9NZM3 1697 aa19.53■□□□□ 0.72
MSRA-202ENST00000382490 KCNH8Q96L42 1107 aa19.53■□□□□ 0.72
MSRA-202ENST00000382490 DHX57Q6P158 1386 aaKnown RBP19.52■□□□□ 0.71
MSRA-202ENST00000382490 ABCC5O15440 1437 aa19.51■□□□□ 0.71
MSRA-202ENST00000382490 CAMSAP2Q08AD1 1489 aa19.5■□□□□ 0.71
MSRA-202ENST00000382490 ZNF777Q9ULD5 760 aaPredicted RBP19.5■□□□□ 0.71
MSRA-202ENST00000382490 CDC42BPAQ5VT25 1732 aa19.5■□□□□ 0.71
MSRA-202ENST00000382490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.5■□□□□ 0.71
MSRA-202ENST00000382490 HFM1A2PYH4 1435 aa19.5■□□□□ 0.71
MSRA-202ENST00000382490 CHIC2Q9UKJ5 165 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms