RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 EFCAB5A4FU69 1503 aa26.5■■□□□ 1.83
RPAIN-203ENST00000381209 PBRM1Q86U86 1689 aa26.46■■□□□ 1.83
RPAIN-203ENST00000381209 ZNF608Q9ULD9 1512 aaPredicted RBP26.45■■□□□ 1.82
RPAIN-203ENST00000381209 CTTNBP2Q8WZ74 1663 aa26.45■■□□□ 1.82
RPAIN-203ENST00000381209 ADAMTS12P58397 1594 aa26.44■■□□□ 1.82
RPAIN-203ENST00000381209 MAP3K1Q13233 1512 aa26.4■■□□□ 1.82
RPAIN-203ENST00000381209 ZEB1P37275 1124 aaPredicted RBP26.39■■□□□ 1.82
RPAIN-203ENST00000381209 FHOD3Q2V2M9 1422 aa26.34■■□□□ 1.81
RPAIN-203ENST00000381209 KANK4Q5T7N3 995 aaPredicted RBP26.34■■□□□ 1.81
RPAIN-203ENST00000381209 EIF4G3O43432 1585 aaKnown RBP26.32■■□□□ 1.8
RPAIN-203ENST00000381209 P3H3Q8IVL6 736 aa26.32■■□□□ 1.8
RPAIN-203ENST00000381209 SAMD9Q5K651 1589 aa26.3■■□□□ 1.8
RPAIN-203ENST00000381209 FMN1Q68DA7 1419 aa26.29■■□□□ 1.8
RPAIN-203ENST00000381209 SNAPC4Q5SXM2 1469 aa26.29■■□□□ 1.8
RPAIN-203ENST00000381209 CASKIN1Q8WXD9 1431 aa26.28■■□□□ 1.8
RPAIN-203ENST00000381209 MAGI1Q96QZ7 1491 aaPredicted RBP26.27■■□□□ 1.8
RPAIN-203ENST00000381209 FYCO1Q9BQS8 1478 aa26.27■■□□□ 1.8
RPAIN-203ENST00000381209 TIAM1Q13009 1591 aa26.27■■□□□ 1.8
RPAIN-203ENST00000381209 PCF11O94913 1555 aaKnown RBP26.23■■□□□ 1.79
RPAIN-203ENST00000381209 IQGAP2Q13576 1575 aa26.22■■□□□ 1.79
RPAIN-203ENST00000381209 GRIN2AQ12879 1464 aa26.2■■□□□ 1.78
RPAIN-203ENST00000381209 LRRC9Q6ZRR7 1453 aa26.18■■□□□ 1.78
RPAIN-203ENST00000381209 KIAA0586Q9BVV6 1533 aa26.18■■□□□ 1.78
RPAIN-203ENST00000381209 RRBP1Q9P2E9 1410 aaKnown RBP26.17■■□□□ 1.78
RPAIN-203ENST00000381209 SYNJ2O15056 1496 aa26.16■■□□□ 1.78
RPAIN-203ENST00000381209 UGGT2Q9NYU1 1516 aa26.15■■□□□ 1.78
RPAIN-203ENST00000381209 CFAP43Q8NDM7 1665 aa26.13■■□□□ 1.77
RPAIN-203ENST00000381209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.12■■□□□ 1.77
RPAIN-203ENST00000381209 CHMP7Q8WUX9 453 aaPredicted RBP26.11■■□□□ 1.77
RPAIN-203ENST00000381209 CCER1Q8TC90 406 aaPredicted RBP26.09■■□□□ 1.77
RPAIN-203ENST00000381209 HNRNPUL2Q1KMD3 747 aaKnown RBP26.09■■□□□ 1.77
RPAIN-203ENST00000381209 ATP1B4Q9UN42 357 aaPredicted RBP26.09■■□□□ 1.77
RPAIN-203ENST00000381209 CCNB3Q8WWL7 1395 aa26.06■■□□□ 1.76
RPAIN-203ENST00000381209 NUP160Q12769 1436 aa26.03■■□□□ 1.76
RPAIN-203ENST00000381209 CEP170Q5SW79 1584 aa25.98■■□□□ 1.75
RPAIN-203ENST00000381209 DISP1Q96F81 1524 aa25.98■■□□□ 1.75
RPAIN-203ENST00000381209 PHLDB1Q86UU1 1377 aa25.96■■□□□ 1.75
RPAIN-203ENST00000381209 CCDC18Q5T9S5 1454 aa25.95■■□□□ 1.75
RPAIN-203ENST00000381209 FBLN2P98095 1184 aa25.95■■□□□ 1.74
RPAIN-203ENST00000381209 KIAA0556O60303 1618 aa25.94■■□□□ 1.74
RPAIN-203ENST00000381209 MTUS2Q5JR59 1369 aa25.92■■□□□ 1.74
RPAIN-203ENST00000381209 HECW1Q76N89 1606 aa25.91■■□□□ 1.74
RPAIN-203ENST00000381209 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.87■■□□□ 1.73
RPAIN-203ENST00000381209 EHBP1L1Q8N3D4 1523 aa25.86■■□□□ 1.73
RPAIN-203ENST00000381209 JPH4Q96JJ6 628 aa25.85■■□□□ 1.73
RPAIN-203ENST00000381209 CARMIL2Q6F5E8 1435 aa25.85■■□□□ 1.73
RPAIN-203ENST00000381209 EPRSP07814 1512 aaKnown RBP25.84■■□□□ 1.73
RPAIN-203ENST00000381209 LRRIQ1Q96JM4 1722 aa25.82■■□□□ 1.72
RPAIN-203ENST00000381209 NCOA2Q15596 1464 aa25.78■■□□□ 1.72
RPAIN-203ENST00000381209 FGD6Q6ZV73 1430 aa25.76■■□□□ 1.71
RPAIN-203ENST00000381209 ARHGEF11O15085 1522 aa25.75■■□□□ 1.71
RPAIN-203ENST00000381209 FAM50AQ14320 339 aaKnown RBP25.74■■□□□ 1.71
RPAIN-203ENST00000381209 SUPT6HQ7KZ85 1726 aaKnown RBP25.73■■□□□ 1.71
RPAIN-203ENST00000381209 MAGI3Q5TCQ9 1506 aa25.73■■□□□ 1.71
RPAIN-203ENST00000381209 MYOM3Q5VTT5 1437 aa25.73■■□□□ 1.71
RPAIN-203ENST00000381209 NUP153P49790 1475 aaKnown RBP25.72■■□□□ 1.71
RPAIN-203ENST00000381209 RAPGEF6Q8TEU7 1601 aa25.71■■□□□ 1.71
RPAIN-203ENST00000381209 CLSPNQ9HAW4 1339 aa25.71■■□□□ 1.71
RPAIN-203ENST00000381209 CDK13Q14004 1512 aaKnown RBP25.71■■□□□ 1.71
RPAIN-203ENST00000381209 ITGAEP38570 1179 aa25.7■■□□□ 1.7
RPAIN-203ENST00000381209 DHX57Q6P158 1386 aaKnown RBP25.66■■□□□ 1.7
RPAIN-203ENST00000381209 CDK11AQ9UQ88 783 aaPredicted RBP25.66■■□□□ 1.7
RPAIN-203ENST00000381209 SETD5Q9C0A6 1442 aa25.64■■□□□ 1.69
RPAIN-203ENST00000381209 PRG4Q92954 1404 aaPredicted RBP25.62■■□□□ 1.69
RPAIN-203ENST00000381209 PLB1Q6P1J6 1458 aa25.62■■□□□ 1.69
RPAIN-203ENST00000381209 CHD1O14646 1710 aa25.61■■□□□ 1.69
RPAIN-203ENST00000381209 RAB3GAP2Q9H2M9 1393 aa25.6■■□□□ 1.69
RPAIN-203ENST00000381209 MIA2Q96PC5 1412 aa25.59■■□□□ 1.69
RPAIN-203ENST00000381209 TCOF1Q13428 1488 aaKnown RBP25.58■■□□□ 1.68
RPAIN-203ENST00000381209 ARID3CA6NKF2 412 aa25.58■■□□□ 1.68
RPAIN-203ENST00000381209 ABCA8O94911 1581 aa25.57■■□□□ 1.68
RPAIN-203ENST00000381209 TROQ12816 1431 aaPredicted RBP25.55■■□□□ 1.68
RPAIN-203ENST00000381209 PTPRGP23470 1445 aa25.54■■□□□ 1.68
RPAIN-203ENST00000381209 SHROOM2Q13796 1616 aa25.54■■□□□ 1.68
RPAIN-203ENST00000381209 PTPN23Q9H3S7 1636 aa25.52■■□□□ 1.68
RPAIN-203ENST00000381209 PTPRKQ15262 1439 aa25.47■■□□□ 1.67
RPAIN-203ENST00000381209 HFM1A2PYH4 1435 aa25.46■■□□□ 1.67
RPAIN-203ENST00000381209 ATP10BO94823 1461 aa25.45■■□□□ 1.66
RPAIN-203ENST00000381209 CLASP1Q7Z460 1538 aa25.44■■□□□ 1.66
RPAIN-203ENST00000381209 PLEKHD1A6NEE1 506 aa25.42■■□□□ 1.66
RPAIN-203ENST00000381209 UACAQ9BZF9 1416 aa25.4■■□□□ 1.66
RPAIN-203ENST00000381209 ADCY10Q96PN6 1610 aa25.39■■□□□ 1.66
RPAIN-203ENST00000381209 AKNAQ7Z591 1439 aa25.38■■□□□ 1.65
RPAIN-203ENST00000381209 NAIPQ13075 1403 aa25.37■■□□□ 1.65
RPAIN-203ENST00000381209 GPATCH8Q9UKJ3 1502 aaKnown RBP25.33■■□□□ 1.65
RPAIN-203ENST00000381209 MAPKBP1O60336 1514 aa25.33■■□□□ 1.64
RPAIN-203ENST00000381209 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
RPAIN-203ENST00000381209 CFDP1Q9UEE9 299 aaPredicted RBP25.3■■□□□ 1.64
RPAIN-203ENST00000381209 KIF14Q15058 1648 aa25.28■■□□□ 1.64
RPAIN-203ENST00000381209 ROCK1Q13464 1354 aa25.28■■□□□ 1.64
RPAIN-203ENST00000381209 ABCC10Q5T3U5 1492 aa25.28■■□□□ 1.64
RPAIN-203ENST00000381209 DAPK1P53355 1430 aa25.28■■□□□ 1.64
RPAIN-203ENST00000381209 ABCC2Q92887 1545 aa25.28■■□□□ 1.64
RPAIN-203ENST00000381209 ITSN2Q9NZM3 1697 aa25.27■■□□□ 1.64
RPAIN-203ENST00000381209 ABCC5O15440 1437 aa25.26■■□□□ 1.63
RPAIN-203ENST00000381209 ACIN1Q9UKV3 1341 aaKnown RBP25.25■■□□□ 1.63
RPAIN-203ENST00000381209 ZNF644Q9H582 1327 aaPredicted RBP25.24■■□□□ 1.63
RPAIN-203ENST00000381209 DNMT1P26358 1616 aaKnown RBP25.24■■□□□ 1.63
RPAIN-203ENST00000381209 ZNF316A6NFI3 1004 aaPredicted RBP25.23■■□□□ 1.63
RPAIN-203ENST00000381209 UHRF1BP1LA0JNW5 1464 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms