RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 PLPPR3Q6T4P5 718 aa22.76■■□□□ 1.23
RPAIN-202ENST00000381208 ADRA2BP18089 450 aa22.75■■□□□ 1.23
RPAIN-202ENST00000381208 NUP160Q12769 1436 aa22.73■■□□□ 1.23
RPAIN-202ENST00000381208 TRHP20396 242 aaPredicted RBP22.71■■□□□ 1.23
RPAIN-202ENST00000381208 CEP170Q5SW79 1584 aa22.64■■□□□ 1.21
RPAIN-202ENST00000381208 KIF27Q86VH2 1401 aa22.58■■□□□ 1.2
RPAIN-202ENST00000381208 SHROOM2Q13796 1616 aa22.56■■□□□ 1.2
RPAIN-202ENST00000381208 JPH4Q96JJ6 628 aa22.53■■□□□ 1.2
RPAIN-202ENST00000381208 IGF1RP08069 1367 aa22.51■■□□□ 1.19
RPAIN-202ENST00000381208 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
RPAIN-202ENST00000381208 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
RPAIN-202ENST00000381208 CUL7Q14999 1698 aa22.45■■□□□ 1.18
RPAIN-202ENST00000381208 RUSC2Q8N2Y8 1516 aa22.43■■□□□ 1.18
RPAIN-202ENST00000381208 KIAA0586Q9BVV6 1533 aa22.42■■□□□ 1.18
RPAIN-202ENST00000381208 CARMIL1Q5VZK9 1371 aa22.39■■□□□ 1.17
RPAIN-202ENST00000381208 NPM1P06748 294 aaKnown RBP eCLIP22.31■■□□□ 1.16
RPAIN-202ENST00000381208 CARMIL2Q6F5E8 1435 aa22.24■■□□□ 1.15
RPAIN-202ENST00000381208 PTPRGP23470 1445 aa22.19■■□□□ 1.14
RPAIN-202ENST00000381208 MAPKBP1O60336 1514 aa22.19■■□□□ 1.14
RPAIN-202ENST00000381208 RAPGEF2Q9Y4G8 1499 aa22.19■■□□□ 1.14
RPAIN-202ENST00000381208 TNIKQ9UKE5 1360 aa22.18■■□□□ 1.14
RPAIN-202ENST00000381208 IQGAP2Q13576 1575 aa22.17■■□□□ 1.14
RPAIN-202ENST00000381208 ABCC10Q5T3U5 1492 aa22.15■■□□□ 1.14
RPAIN-202ENST00000381208 ADCY10Q96PN6 1610 aa22.15■■□□□ 1.14
RPAIN-202ENST00000381208 FAM69CQ0P6D2 419 aa22.13■■□□□ 1.13
RPAIN-202ENST00000381208 KIF13AQ9H1H9 1805 aa22.09■■□□□ 1.13
RPAIN-202ENST00000381208 UGGT2Q9NYU1 1516 aa22.06■■□□□ 1.12
RPAIN-202ENST00000381208 ABCC2Q92887 1545 aa22.04■■□□□ 1.12
RPAIN-202ENST00000381208 DISP1Q96F81 1524 aa22.04■■□□□ 1.12
RPAIN-202ENST00000381208 TTBK1Q5TCY1 1321 aaPredicted RBP22.04■■□□□ 1.12
RPAIN-202ENST00000381208 UHRF1BP1LA0JNW5 1464 aa22.03■■□□□ 1.12
RPAIN-202ENST00000381208 DIP2BQ9P265 1576 aa22.03■■□□□ 1.12
RPAIN-202ENST00000381208 UACAQ9BZF9 1416 aa22.02■■□□□ 1.12
RPAIN-202ENST00000381208 PLB1Q6P1J6 1458 aa21.99■■□□□ 1.11
RPAIN-202ENST00000381208 PRXQ9BXM0 1461 aa21.98■■□□□ 1.11
RPAIN-202ENST00000381208 GOLGA3Q08378 1498 aa21.95■■□□□ 1.11
RPAIN-202ENST00000381208 KIAA0556O60303 1618 aa21.94■■□□□ 1.1
RPAIN-202ENST00000381208 ASXL2Q76L83 1435 aa21.94■■□□□ 1.1
RPAIN-202ENST00000381208 KDM5BQ9UGL1 1544 aa21.91■■□□□ 1.1
RPAIN-202ENST00000381208 CTTNBP2Q8WZ74 1663 aa21.9■■□□□ 1.1
RPAIN-202ENST00000381208 FAM9AQ8IZU1 332 aaPredicted RBP21.89■■□□□ 1.1
RPAIN-202ENST00000381208 CSRNP3Q8WYN3 585 aa21.87■■□□□ 1.09
RPAIN-202ENST00000381208 GLI2P10070 1586 aa21.87■■□□□ 1.09
RPAIN-202ENST00000381208 EEA1Q15075 1411 aa21.86■■□□□ 1.09
RPAIN-202ENST00000381208 KDM6BO15054 1643 aa21.83■■□□□ 1.08
RPAIN-202ENST00000381208 EPRSP07814 1512 aaKnown RBP21.8■■□□□ 1.08
RPAIN-202ENST00000381208 TSPOAP1O95153 1857 aa21.79■■□□□ 1.08
RPAIN-202ENST00000381208 ZCCHC11Q5TAX3 1644 aaKnown RBP21.78■■□□□ 1.08
RPAIN-202ENST00000381208 ABCA8O94911 1581 aa21.75■■□□□ 1.07
RPAIN-202ENST00000381208 WDR7Q9Y4E6 1490 aa21.75■■□□□ 1.07
RPAIN-202ENST00000381208 TEX14Q8IWB6 1497 aa21.75■■□□□ 1.07
RPAIN-202ENST00000381208 MAP3K4Q9Y6R4 1608 aa21.69■■□□□ 1.06
RPAIN-202ENST00000381208 PPRC1Q5VV67 1664 aaKnown RBP21.68■■□□□ 1.06
RPAIN-202ENST00000381208 P3H3Q8IVL6 736 aa21.65■■□□□ 1.06
RPAIN-202ENST00000381208 SAMD9Q5K651 1589 aa21.63■■□□□ 1.05
RPAIN-202ENST00000381208 KCNH8Q96L42 1107 aa21.62■■□□□ 1.05
RPAIN-202ENST00000381208 CD109Q6YHK3 1445 aa21.62■■□□□ 1.05
RPAIN-202ENST00000381208 MAGI3Q5TCQ9 1506 aa21.61■■□□□ 1.05
RPAIN-202ENST00000381208 ATP10BO94823 1461 aa21.59■■□□□ 1.05
RPAIN-202ENST00000381208 CFAP43Q8NDM7 1665 aa21.58■■□□□ 1.05
RPAIN-202ENST00000381208 COL17A1Q9UMD9 1497 aaPredicted RBP21.57■■□□□ 1.04
RPAIN-202ENST00000381208 KIF21BO75037 1637 aa21.56■■□□□ 1.04
RPAIN-202ENST00000381208 KDM4FA0A1W2PPD8 638 aa21.55■■□□□ 1.04
RPAIN-202ENST00000381208 RAPGEF6Q8TEU7 1601 aa21.53■■□□□ 1.04
RPAIN-202ENST00000381208 EFCAB5A4FU69 1503 aa21.51■■□□□ 1.03
RPAIN-202ENST00000381208 PHLDB1Q86UU1 1377 aa21.51■■□□□ 1.03
RPAIN-202ENST00000381208 ARID3CA6NKF2 412 aa21.51■■□□□ 1.03
RPAIN-202ENST00000381208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.5■■□□□ 1.03
RPAIN-202ENST00000381208 HNRNPUL2Q1KMD3 747 aaKnown RBP21.5■■□□□ 1.03
RPAIN-202ENST00000381208 FHOD3Q2V2M9 1422 aa21.5■■□□□ 1.03
RPAIN-202ENST00000381208 RANGAP1P46060 587 aaPredicted RBP21.49■■□□□ 1.03
RPAIN-202ENST00000381208 NUP153P49790 1475 aaKnown RBP21.46■■□□□ 1.03
RPAIN-202ENST00000381208 UBTFP17480 764 aaKnown RBP21.45■■□□□ 1.02
RPAIN-202ENST00000381208 CACNB1Q02641 598 aaPredicted RBP21.45■■□□□ 1.02
RPAIN-202ENST00000381208 PLEKHD1A6NEE1 506 aa21.44■■□□□ 1.02
RPAIN-202ENST00000381208 ABCA9Q8IUA7 1624 aa21.43■■□□□ 1.02
RPAIN-202ENST00000381208 ARAP3Q8WWN8 1544 aa21.43■■□□□ 1.02
RPAIN-202ENST00000381208 ADGRL1O94910 1474 aa21.42■■□□□ 1.02
RPAIN-202ENST00000381208 NEO1Q92859 1461 aa21.39■■□□□ 1.02
RPAIN-202ENST00000381208 FMN1Q68DA7 1419 aa21.36■■□□□ 1.01
RPAIN-202ENST00000381208 DMRT2Q9Y5R5 561 aa21.32■■□□□ 1
RPAIN-202ENST00000381208 EHMT2Q96KQ7 1210 aa21.29■■□□□ 1
RPAIN-202ENST00000381208 CDK11AQ9UQ88 783 aaPredicted RBP21.29■■□□□ 1
RPAIN-202ENST00000381208 ARHGAP35Q9NRY4 1499 aa21.28■■□□□ 1
RPAIN-202ENST00000381208 RAPGEF3O95398 923 aa21.26■□□□□ 0.99
RPAIN-202ENST00000381208 HECW1Q76N89 1606 aa21.24■□□□□ 0.99
RPAIN-202ENST00000381208 CFAP74Q9C0B2 1584 aa21.24■□□□□ 0.99
RPAIN-202ENST00000381208 ATP1B4Q9UN42 357 aaPredicted RBP21.23■□□□□ 0.99
RPAIN-202ENST00000381208 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.23■□□□□ 0.99
RPAIN-202ENST00000381208 FANCAO15360 1455 aa21.22■□□□□ 0.99
RPAIN-202ENST00000381208 DENND4BO75064 1496 aaPredicted RBP21.22■□□□□ 0.99
RPAIN-202ENST00000381208 AKNAQ7Z591 1439 aa21.22■□□□□ 0.99
RPAIN-202ENST00000381208 CDK13Q14004 1512 aaKnown RBP21.22■□□□□ 0.99
RPAIN-202ENST00000381208 MAPK8IP2Q13387 824 aaPredicted RBP21.2■□□□□ 0.98
RPAIN-202ENST00000381208 PLCH2O75038 1416 aa21.17■□□□□ 0.98
RPAIN-202ENST00000381208 TTC37Q6PGP7 1564 aa21.16■□□□□ 0.98
RPAIN-202ENST00000381208 FRMPD1Q5SYB0 1578 aa21.15■□□□□ 0.98
RPAIN-202ENST00000381208 CLIP1P30622 1438 aa21.15■□□□□ 0.98
RPAIN-202ENST00000381208 EFCAB2Q5VUJ9 269 aa21.13■□□□□ 0.97
RPAIN-202ENST00000381208 TROQ12816 1431 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms