RNA–Protein interactions for RNA: ENST00000380691.2

MSL3-204, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-204ENST00000380691 CNKSR2Q8WXI2 1034 aa11.04□□□□□ -0.64
MSL3-204ENST00000380691 ABCC10Q5T3U5 1492 aa11.03□□□□□ -0.64
MSL3-204ENST00000380691 FAM69CQ0P6D2 419 aa11.02□□□□□ -0.65
MSL3-204ENST00000380691 CEP170Q5SW79 1584 aa11.01□□□□□ -0.65
MSL3-204ENST00000380691 KIF13AQ9H1H9 1805 aa10.99□□□□□ -0.65
MSL3-204ENST00000380691 NUP160Q12769 1436 aa10.99□□□□□ -0.65
MSL3-204ENST00000380691 GRIN2AQ12879 1464 aa10.99□□□□□ -0.65
MSL3-204ENST00000380691 KDM6BO15054 1643 aa10.98□□□□□ -0.65
MSL3-204ENST00000380691 NCBP3Q53F19 620 aaKnown RBP10.97□□□□□ -0.65
MSL3-204ENST00000380691 MAPKBP1O60336 1514 aa10.97□□□□□ -0.65
MSL3-204ENST00000380691 FBXO41Q8TF61 875 aa10.96□□□□□ -0.65
MSL3-204ENST00000380691 DIP2BQ9P265 1576 aa10.94□□□□□ -0.66
MSL3-204ENST00000380691 HECW2Q9P2P5 1572 aa10.94□□□□□ -0.66
MSL3-204ENST00000380691 ADGRL1O94910 1474 aa10.94□□□□□ -0.66
MSL3-204ENST00000380691 SHROOM2Q13796 1616 aa10.94□□□□□ -0.66
MSL3-204ENST00000380691 CUX1P39880 1505 aa10.94□□□□□ -0.66
MSL3-204ENST00000380691 DCAF8L1A6NGE4 600 aa10.93□□□□□ -0.66
MSL3-204ENST00000380691 SLC24A1O60721 1099 aa10.93□□□□□ -0.66
MSL3-204ENST00000380691 NPM1P06748 294 aaKnown RBP eCLIP10.93□□□□□ -0.66
MSL3-204ENST00000380691 KCNA4P22459 653 aa10.92□□□□□ -0.66
MSL3-204ENST00000380691 PBRM1Q86U86 1689 aa10.92□□□□□ -0.66
MSL3-204ENST00000380691 ABCA10Q8WWZ4 1543 aa10.91□□□□□ -0.66
MSL3-204ENST00000380691 PRG4Q92954 1404 aaPredicted RBP10.91□□□□□ -0.66
MSL3-204ENST00000380691 ABCA5Q8WWZ7 1642 aa10.91□□□□□ -0.66
MSL3-204ENST00000380691 HOXD11P31277 338 aaPredicted RBP10.89□□□□□ -0.67
MSL3-204ENST00000380691 ADAMTS12P58397 1594 aa10.89□□□□□ -0.67
MSL3-204ENST00000380691 RNF216Q9NWF9 866 aaPredicted RBP10.88□□□□□ -0.67
MSL3-204ENST00000380691 FHAD1B1AJZ9 1412 aa10.87□□□□□ -0.67
MSL3-204ENST00000380691 LMTK3Q96Q04 1460 aa10.84□□□□□ -0.67
MSL3-204ENST00000380691 JPH4Q96JJ6 628 aa10.83□□□□□ -0.68
MSL3-204ENST00000380691 ADCY10Q96PN6 1610 aa10.8□□□□□ -0.68
MSL3-204ENST00000380691 WRNQ14191 1432 aaPredicted RBP eCLIP10.78□□□□□ -0.68
MSL3-204ENST00000380691 RNF39Q9H2S5 420 aa10.77□□□□□ -0.69
MSL3-204ENST00000380691 ERICH3Q5RHP9 1530 aa10.76□□□□□ -0.69
MSL3-204ENST00000380691 SOCS7O14512 581 aa10.75□□□□□ -0.69
MSL3-204ENST00000380691 NPM3O75607 178 aaKnown RBP10.75□□□□□ -0.69
MSL3-204ENST00000380691 RUSC2Q8N2Y8 1516 aa10.74□□□□□ -0.69
MSL3-204ENST00000380691 PLB1Q6P1J6 1458 aa10.73□□□□□ -0.69
MSL3-204ENST00000380691 COL17A1Q9UMD9 1497 aaPredicted RBP10.73□□□□□ -0.69
MSL3-204ENST00000380691 GLI2P10070 1586 aa10.73□□□□□ -0.69
MSL3-204ENST00000380691 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
MSL3-204ENST00000380691 TSPOAP1O95153 1857 aa10.71□□□□□ -0.69
MSL3-204ENST00000380691 ASXL2Q76L83 1435 aa10.71□□□□□ -0.69
MSL3-204ENST00000380691 TEX14Q8IWB6 1497 aa10.7□□□□□ -0.7
MSL3-204ENST00000380691 ABCC2Q92887 1545 aa10.69□□□□□ -0.7
MSL3-204ENST00000380691 PPRC1Q5VV67 1664 aaKnown RBP10.68□□□□□ -0.7
MSL3-204ENST00000380691 PTPRGP23470 1445 aa10.67□□□□□ -0.7
MSL3-204ENST00000380691 DISP3Q9P2K9 1392 aa10.66□□□□□ -0.7
MSL3-204ENST00000380691 ILDR2Q71H61 639 aa10.66□□□□□ -0.7
MSL3-204ENST00000380691 KIAA0586Q9BVV6 1533 aa10.66□□□□□ -0.7
MSL3-204ENST00000380691 EPRSP07814 1512 aaKnown RBP10.63□□□□□ -0.71
MSL3-204ENST00000380691 UHRF1BP1LA0JNW5 1464 aa10.61□□□□□ -0.71
MSL3-204ENST00000380691 TNIKQ9UKE5 1360 aa10.61□□□□□ -0.71
MSL3-204ENST00000380691 MAP3K4Q9Y6R4 1608 aa10.6□□□□□ -0.71
MSL3-204ENST00000380691 CARMIL2Q6F5E8 1435 aa10.58□□□□□ -0.72
MSL3-204ENST00000380691 PTPRMP28827 1452 aa10.58□□□□□ -0.72
MSL3-204ENST00000380691 C1QBPQ07021 282 aaKnown RBP10.58□□□□□ -0.72
MSL3-204ENST00000380691 PCF11O94913 1555 aaKnown RBP10.57□□□□□ -0.72
MSL3-204ENST00000380691 BIVM-ERCC5R4GMW8 1640 aa10.57□□□□□ -0.72
MSL3-204ENST00000380691 UACAQ9BZF9 1416 aa10.57□□□□□ -0.72
MSL3-204ENST00000380691 TTBK1Q5TCY1 1321 aaPredicted RBP10.57□□□□□ -0.72
MSL3-204ENST00000380691 CERKQ8TCT0 537 aa10.56□□□□□ -0.72
MSL3-204ENST00000380691 KDM5BQ9UGL1 1544 aa10.56□□□□□ -0.72
MSL3-204ENST00000380691 MAGI3Q5TCQ9 1506 aa10.53□□□□□ -0.72
MSL3-204ENST00000380691 WDR7Q9Y4E6 1490 aa10.52□□□□□ -0.73
MSL3-204ENST00000380691 SPATA31D1Q6ZQQ2 1576 aa10.52□□□□□ -0.73
MSL3-204ENST00000380691 KIF21BO75037 1637 aa10.51□□□□□ -0.73
MSL3-204ENST00000380691 CUL7Q14999 1698 aa10.5□□□□□ -0.73
MSL3-204ENST00000380691 CD109Q6YHK3 1445 aa10.5□□□□□ -0.73
MSL3-204ENST00000380691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.49□□□□□ -0.73
MSL3-204ENST00000380691 ADAMTSL3P82987 1691 aa10.48□□□□□ -0.73
MSL3-204ENST00000380691 IGF1RP08069 1367 aa10.48□□□□□ -0.73
MSL3-204ENST00000380691 ARAP3Q8WWN8 1544 aa10.46□□□□□ -0.74
MSL3-204ENST00000380691 ZCCHC11Q5TAX3 1644 aaKnown RBP10.45□□□□□ -0.74
MSL3-204ENST00000380691 DISP1Q96F81 1524 aa10.45□□□□□ -0.74
MSL3-204ENST00000380691 HSPA2P54652 639 aa10.45□□□□□ -0.74
MSL3-204ENST00000380691 IQGAP2Q13576 1575 aa10.43□□□□□ -0.74
MSL3-204ENST00000380691 KIF27Q86VH2 1401 aa10.43□□□□□ -0.74
MSL3-204ENST00000380691 PHLDB1Q86UU1 1377 aa10.41□□□□□ -0.74
MSL3-204ENST00000380691 CFAP43Q8NDM7 1665 aa10.41□□□□□ -0.74
MSL3-204ENST00000380691 MADDQ8WXG6 1647 aa10.41□□□□□ -0.74
MSL3-204ENST00000380691 POTEHQ6S545 545 aa10.41□□□□□ -0.74
MSL3-204ENST00000380691 CSRNP3Q8WYN3 585 aa10.41□□□□□ -0.74
MSL3-204ENST00000380691 SLC4A1APQ9BWU0 796 aaKnown RBP10.41□□□□□ -0.74
MSL3-204ENST00000380691 CARMIL1Q5VZK9 1371 aa10.4□□□□□ -0.74
MSL3-204ENST00000380691 ARID4BQ4LE39 1312 aaPredicted RBP10.4□□□□□ -0.74
MSL3-204ENST00000380691 KCNH8Q96L42 1107 aa10.39□□□□□ -0.75
MSL3-204ENST00000380691 BCORL1Q5H9F3 1711 aa10.38□□□□□ -0.75
MSL3-204ENST00000380691 UGGT2Q9NYU1 1516 aa10.38□□□□□ -0.75
MSL3-204ENST00000380691 KIAA0556O60303 1618 aa10.36□□□□□ -0.75
MSL3-204ENST00000380691 RAPGEF3O95398 923 aa10.35□□□□□ -0.75
MSL3-204ENST00000380691 NEO1Q92859 1461 aa10.34□□□□□ -0.75
MSL3-204ENST00000380691 POGZQ7Z3K3 1410 aa10.33□□□□□ -0.76
MSL3-204ENST00000380691 YEATS2Q9ULM3 1422 aa10.33□□□□□ -0.76
MSL3-204ENST00000380691 ARHGEF40Q8TER5 1519 aa10.33□□□□□ -0.76
MSL3-204ENST00000380691 RIMS1Q86UR5 1692 aaKnown RBP10.31□□□□□ -0.76
MSL3-204ENST00000380691 AMER1Q5JTC6 1135 aaPredicted RBP10.31□□□□□ -0.76
MSL3-204ENST00000380691 FANCAO15360 1455 aa10.3□□□□□ -0.76
MSL3-204ENST00000380691 IQSEC2Q5JU85 1478 aa10.3□□□□□ -0.76
MSL3-204ENST00000380691 ABCA8O94911 1581 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms