RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
COL2A1-202ENST00000380518 GOLGA3Q08378 1498 aa21.28■■□□□ 1
COL2A1-202ENST00000380518 CEP162Q5TB80 1403 aa21.27■■□□□ 1
COL2A1-202ENST00000380518 MYH16Q9H6N6 1097 aa21.25■□□□□ 0.99
COL2A1-202ENST00000380518 PLEKHD1A6NEE1 506 aa21.2■□□□□ 0.98
COL2A1-202ENST00000380518 GLIPR1L2Q4G1C9 344 aa21.17■□□□□ 0.98
COL2A1-202ENST00000380518 ARXQ96QS3 562 aa21.17■□□□□ 0.98
COL2A1-202ENST00000380518 CCDC180Q9P1Z9 1646 aa21.17■□□□□ 0.98
COL2A1-202ENST00000380518 DDRGK1Q96HY6 314 aa21.15■□□□□ 0.98
COL2A1-202ENST00000380518 WRNQ14191 1432 aaPredicted RBP eCLIP21.14■□□□□ 0.97
COL2A1-202ENST00000380518 BECN1Q14457 450 aa21.14■□□□□ 0.97
COL2A1-202ENST00000380518 MYO15BQ96JP2 1530 aa21.13■□□□□ 0.97
COL2A1-202ENST00000380518 CDCA8Q53HL2 280 aa21.13■□□□□ 0.97
COL2A1-202ENST00000380518 RGL3Q3MIN7 710 aa21.12■□□□□ 0.97
COL2A1-202ENST00000380518 TNIKQ9UKE5 1360 aa21.12■□□□□ 0.97
COL2A1-202ENST00000380518 KCNH8Q96L42 1107 aa21.11■□□□□ 0.97
COL2A1-202ENST00000380518 CFAP53Q96M91 514 aa21.09■□□□□ 0.97
COL2A1-202ENST00000380518 CFDP1Q9UEE9 299 aaPredicted RBP21.09■□□□□ 0.97
COL2A1-202ENST00000380518 PPP1R15AO75807 674 aaPredicted RBP21.08■□□□□ 0.97
COL2A1-202ENST00000380518 KIF27Q86VH2 1401 aa21.07■□□□□ 0.96
COL2A1-202ENST00000380518 KNSTRNQ9Y448 316 aa21.07■□□□□ 0.96
COL2A1-202ENST00000380518 ANP32EQ9BTT0 268 aa21.06■□□□□ 0.96
COL2A1-202ENST00000380518 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
COL2A1-202ENST00000380518 CARD11Q9BXL7 1154 aa21.04■□□□□ 0.96
COL2A1-202ENST00000380518 RB1CC1Q8TDY2 1594 aa21.04■□□□□ 0.96
COL2A1-202ENST00000380518 SUPT16HQ9Y5B9 1047 aaKnown RBP21.03■□□□□ 0.96
COL2A1-202ENST00000380518 GOLGA6L22H0YM25 854 aa21■□□□□ 0.95
COL2A1-202ENST00000380518 NCLP19338 710 aaKnown RBP20.99■□□□□ 0.95
COL2A1-202ENST00000380518 C14orf37Q86TY3 774 aa20.97■□□□□ 0.95
COL2A1-202ENST00000380518 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
COL2A1-202ENST00000380518 BAZ1BQ9UIG0 1483 aaKnown RBP20.96■□□□□ 0.95
COL2A1-202ENST00000380518 TRIM44Q96DX7 344 aaPredicted RBP20.95■□□□□ 0.94
COL2A1-202ENST00000380518 ZBTB7CA1YPR0 619 aa20.94■□□□□ 0.94
COL2A1-202ENST00000380518 SIN3AQ96ST3 1273 aa20.94■□□□□ 0.94
COL2A1-202ENST00000380518 SENP3-EIF4A1A0A087X0R7 540 aa20.93■□□□□ 0.94
COL2A1-202ENST00000380518 FTSJ3Q8IY81 847 aaKnown RBP20.93■□□□□ 0.94
COL2A1-202ENST00000380518 PPP4R2Q9NY27 417 aa20.93■□□□□ 0.94
COL2A1-202ENST00000380518 A0A0G2JS52 829 aa20.91■□□□□ 0.94
COL2A1-202ENST00000380518 PPM1GO15355 546 aaPredicted RBP20.91■□□□□ 0.94
COL2A1-202ENST00000380518 NUDCQ9Y266 331 aa20.89■□□□□ 0.93
COL2A1-202ENST00000380518 MAPK8IP3Q9UPT6 1336 aa20.88■□□□□ 0.93
COL2A1-202ENST00000380518 PLEKHG5O94827 1062 aa20.87■□□□□ 0.93
COL2A1-202ENST00000380518 NEUROD2Q15784 382 aa20.87■□□□□ 0.93
COL2A1-202ENST00000380518 CASC1Q6TDU7 716 aa20.87■□□□□ 0.93
COL2A1-202ENST00000380518 CCNB3Q8WWL7 1395 aa20.85■□□□□ 0.93
COL2A1-202ENST00000380518 TIMELESSQ9UNS1 1208 aa20.85■□□□□ 0.93
COL2A1-202ENST00000380518 CDK11BP21127 795 aaKnown RBP20.84■□□□□ 0.93
COL2A1-202ENST00000380518 NACADO15069 1562 aa20.83■□□□□ 0.93
COL2A1-202ENST00000380518 FHAD1B1AJZ9 1412 aa20.83■□□□□ 0.92
COL2A1-202ENST00000380518 CHMP4BQ9H444 224 aaKnown RBP20.8■□□□□ 0.92
COL2A1-202ENST00000380518 RGS3P49796 1198 aa20.79■□□□□ 0.92
COL2A1-202ENST00000380518 POGKQ9P215 609 aa20.79■□□□□ 0.92
COL2A1-202ENST00000380518 MS4A1P11836 297 aa20.78■□□□□ 0.92
COL2A1-202ENST00000380518 FRAT1Q92837 279 aaPredicted RBP20.78■□□□□ 0.92
COL2A1-202ENST00000380518 LAS1LQ9Y4W2 734 aaKnown RBP20.78■□□□□ 0.92
COL2A1-202ENST00000380518 ZRSR1Q15695 479 aaKnown RBP20.77■□□□□ 0.91
COL2A1-202ENST00000380518 ARID4BQ4LE39 1312 aaPredicted RBP20.76■□□□□ 0.91
COL2A1-202ENST00000380518 PTMAP06454 111 aaKnown RBP20.76■□□□□ 0.91
COL2A1-202ENST00000380518 CC2D1BQ5T0F9 858 aaKnown RBP20.75■□□□□ 0.91
COL2A1-202ENST00000380518 TMF1P82094 1093 aa20.75■□□□□ 0.91
COL2A1-202ENST00000380518 ERICH6BQ5W0A0 696 aa20.74■□□□□ 0.91
COL2A1-202ENST00000380518 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
COL2A1-202ENST00000380518 HAP1P54257 671 aaPredicted RBP20.72■□□□□ 0.91
COL2A1-202ENST00000380518 TNNT2P45379 298 aaPredicted RBP20.72■□□□□ 0.91
COL2A1-202ENST00000380518 DCAF11Q8TEB1 546 aa20.72■□□□□ 0.91
COL2A1-202ENST00000380518 NOP58Q9Y2X3 529 aaKnown RBP20.72■□□□□ 0.91
COL2A1-202ENST00000380518 CCER2I3L3R5 266 aa20.71■□□□□ 0.91
COL2A1-202ENST00000380518 CARMIL1Q5VZK9 1371 aa20.71■□□□□ 0.91
COL2A1-202ENST00000380518 PNNQ9H307 717 aaKnown RBP20.7■□□□□ 0.9
COL2A1-202ENST00000380518 B4GALNT3Q6L9W6 998 aa20.7■□□□□ 0.9
COL2A1-202ENST00000380518 U2SURPO15042 1029 aaKnown RBP20.7■□□□□ 0.9
COL2A1-202ENST00000380518 DNTTIP2Q5QJE6 756 aaKnown RBP20.64■□□□□ 0.89
COL2A1-202ENST00000380518 SETD5Q9C0A6 1442 aa20.64■□□□□ 0.89
COL2A1-202ENST00000380518 SOGA1O94964 1423 aa20.64■□□□□ 0.89
COL2A1-202ENST00000380518 CUX2O14529 1486 aa20.63■□□□□ 0.89
COL2A1-202ENST00000380518 KANK1Q14678 1352 aa20.62■□□□□ 0.89
COL2A1-202ENST00000380518 HSP90AB1P08238 724 aaKnown RBP20.62■□□□□ 0.89
COL2A1-202ENST00000380518 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
COL2A1-202ENST00000380518 LMOD2Q6P5Q4 547 aa20.61■□□□□ 0.89
COL2A1-202ENST00000380518 HSPA5P11021 654 aaKnown RBP20.59■□□□□ 0.89
COL2A1-202ENST00000380518 TPRNQ4KMQ1 711 aa20.59■□□□□ 0.89
COL2A1-202ENST00000380518 OS9Q13438 667 aaPredicted RBP20.59■□□□□ 0.89
COL2A1-202ENST00000380518 CECR2Q9BXF3 1484 aa20.59■□□□□ 0.89
COL2A1-202ENST00000380518 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
COL2A1-202ENST00000380518 MORC1Q86VD1 984 aa20.57■□□□□ 0.88
COL2A1-202ENST00000380518 FGD1P98174 961 aa20.55■□□□□ 0.88
COL2A1-202ENST00000380518 ARHGAP35Q9NRY4 1499 aa20.55■□□□□ 0.88
COL2A1-202ENST00000380518 KCNJ4P48050 445 aa20.54■□□□□ 0.88
COL2A1-202ENST00000380518 SRPK2P78362 688 aaKnown RBP20.54■□□□□ 0.88
COL2A1-202ENST00000380518 HSCBQ8IWL3 235 aa20.54■□□□□ 0.88
COL2A1-202ENST00000380518 EIF4G1Q04637 1599 aaKnown RBP20.54■□□□□ 0.88
COL2A1-202ENST00000380518 PKD2Q13563 968 aa20.53■□□□□ 0.88
COL2A1-202ENST00000380518 HDGFP51858 240 aaKnown RBP20.53■□□□□ 0.88
COL2A1-202ENST00000380518 PLCB2Q00722 1185 aa20.53■□□□□ 0.88
COL2A1-202ENST00000380518 KTN1Q86UP2 1357 aaKnown RBP20.51■□□□□ 0.87
COL2A1-202ENST00000380518 NAP1L5Q96NT1 182 aaPredicted RBP20.51■□□□□ 0.87
COL2A1-202ENST00000380518 KANK4Q5T7N3 995 aaPredicted RBP20.5■□□□□ 0.87
COL2A1-202ENST00000380518 CFAP44Q96MT7 982 aa20.49■□□□□ 0.87
COL2A1-202ENST00000380518 GOLGA6L6A8MZA4 724 aa20.46■□□□□ 0.87
COL2A1-202ENST00000380518 RBM19Q9Y4C8 960 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms