RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 PBRM1Q86U86 1689 aa15.79■□□□□ 0.12
PMS2-202ENST00000380416 KDM6BO15054 1643 aa15.79■□□□□ 0.12
PMS2-202ENST00000380416 CEP170Q5SW79 1584 aa15.77■□□□□ 0.11
PMS2-202ENST00000380416 HECW2Q9P2P5 1572 aa15.76■□□□□ 0.11
PMS2-202ENST00000380416 FGD5Q6ZNL6 1462 aa15.76■□□□□ 0.11
PMS2-202ENST00000380416 ABCC10Q5T3U5 1492 aa15.75■□□□□ 0.11
PMS2-202ENST00000380416 SHROOM2Q13796 1616 aa15.73■□□□□ 0.11
PMS2-202ENST00000380416 DIP2BQ9P265 1576 aa15.73■□□□□ 0.11
PMS2-202ENST00000380416 NCBP3Q53F19 620 aaKnown RBP15.72■□□□□ 0.11
PMS2-202ENST00000380416 MAPKBP1O60336 1514 aa15.68■□□□□ 0.1
PMS2-202ENST00000380416 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
PMS2-202ENST00000380416 FAM69CQ0P6D2 419 aa15.68■□□□□ 0.1
PMS2-202ENST00000380416 ADGRL1O94910 1474 aa15.67■□□□□ 0.1
PMS2-202ENST00000380416 GRIN2AQ12879 1464 aa15.66■□□□□ 0.1
PMS2-202ENST00000380416 NUP160Q12769 1436 aa15.66■□□□□ 0.1
PMS2-202ENST00000380416 FBXO41Q8TF61 875 aa15.65■□□□□ 0.1
PMS2-202ENST00000380416 ABCA5Q8WWZ7 1642 aa15.65■□□□□ 0.1
PMS2-202ENST00000380416 CUX1P39880 1505 aa15.62■□□□□ 0.09
PMS2-202ENST00000380416 TSPOAP1O95153 1857 aa15.61■□□□□ 0.09
PMS2-202ENST00000380416 ADAMTS12P58397 1594 aa15.58■□□□□ 0.09
PMS2-202ENST00000380416 ABCA10Q8WWZ4 1543 aa15.55■□□□□ 0.08
PMS2-202ENST00000380416 NPM3O75607 178 aaKnown RBP15.55■□□□□ 0.08
PMS2-202ENST00000380416 ADCY10Q96PN6 1610 aa15.54■□□□□ 0.08
PMS2-202ENST00000380416 LMTK3Q96Q04 1460 aa15.53■□□□□ 0.08
PMS2-202ENST00000380416 CNKSR2Q8WXI2 1034 aa15.53■□□□□ 0.08
PMS2-202ENST00000380416 PRG4Q92954 1404 aaPredicted RBP15.51■□□□□ 0.07
PMS2-202ENST00000380416 PPRC1Q5VV67 1664 aaKnown RBP15.48■□□□□ 0.07
PMS2-202ENST00000380416 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
PMS2-202ENST00000380416 FHAD1B1AJZ9 1412 aa15.43■□□□□ 0.06
PMS2-202ENST00000380416 DCAF8L1A6NGE4 600 aa15.43■□□□□ 0.06
PMS2-202ENST00000380416 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
PMS2-202ENST00000380416 RUSC2Q8N2Y8 1516 aa15.39■□□□□ 0.05
PMS2-202ENST00000380416 SOCS7O14512 581 aa15.39■□□□□ 0.05
PMS2-202ENST00000380416 JPH4Q96JJ6 628 aa15.38■□□□□ 0.05
PMS2-202ENST00000380416 COL17A1Q9UMD9 1497 aaPredicted RBP15.38■□□□□ 0.05
PMS2-202ENST00000380416 GLI2P10070 1586 aa15.36■□□□□ 0.05
PMS2-202ENST00000380416 TOP2BQ02880 1626 aa15.36■□□□□ 0.05
PMS2-202ENST00000380416 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
PMS2-202ENST00000380416 ERICH3Q5RHP9 1530 aa15.34■□□□□ 0.05
PMS2-202ENST00000380416 ILDR2Q71H61 639 aa15.33■□□□□ 0.04
PMS2-202ENST00000380416 BIVM-ERCC5R4GMW8 1640 aa15.32■□□□□ 0.04
PMS2-202ENST00000380416 RNF39Q9H2S5 420 aa15.32■□□□□ 0.04
PMS2-202ENST00000380416 WRNQ14191 1432 aaPredicted RBP eCLIP15.32■□□□□ 0.04
PMS2-202ENST00000380416 MAP3K4Q9Y6R4 1608 aa15.27■□□□□ 0.03
PMS2-202ENST00000380416 PLB1Q6P1J6 1458 aa15.25■□□□□ 0.03
PMS2-202ENST00000380416 ASXL2Q76L83 1435 aa15.25■□□□□ 0.03
PMS2-202ENST00000380416 ABCC2Q92887 1545 aa15.24■□□□□ 0.03
PMS2-202ENST00000380416 HOXD11P31277 338 aaPredicted RBP15.24■□□□□ 0.03
PMS2-202ENST00000380416 DISP3Q9P2K9 1392 aa15.23■□□□□ 0.03
PMS2-202ENST00000380416 TEX14Q8IWB6 1497 aa15.22■□□□□ 0.03
PMS2-202ENST00000380416 CUL7Q14999 1698 aa15.19■□□□□ 0.02
PMS2-202ENST00000380416 EPRSP07814 1512 aaKnown RBP15.17■□□□□ 0.02
PMS2-202ENST00000380416 KIF21BO75037 1637 aa15.17■□□□□ 0.02
PMS2-202ENST00000380416 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
PMS2-202ENST00000380416 PCF11O94913 1555 aaKnown RBP15.15■□□□□ 0.02
PMS2-202ENST00000380416 RNF216Q9NWF9 866 aaPredicted RBP15.15■□□□□ 0.02
PMS2-202ENST00000380416 KIAA0586Q9BVV6 1533 aa15.15■□□□□ 0.02
PMS2-202ENST00000380416 SPATA31D1Q6ZQQ2 1576 aa15.14■□□□□ 0.01
PMS2-202ENST00000380416 PTPRGP23470 1445 aa15.13■□□□□ 0.01
PMS2-202ENST00000380416 PTPRMP28827 1452 aa15.13■□□□□ 0.01
PMS2-202ENST00000380416 UHRF1BP1LA0JNW5 1464 aa15.12■□□□□ 0.01
PMS2-202ENST00000380416 ADAMTSL3P82987 1691 aa15.12■□□□□ 0.01
PMS2-202ENST00000380416 C1QBPQ07021 282 aaKnown RBP15.06■□□□□ 0
PMS2-202ENST00000380416 KDM5BQ9UGL1 1544 aa15.06■□□□□ 0
PMS2-202ENST00000380416 CERKQ8TCT0 537 aa15.05■□□□□ -0
PMS2-202ENST00000380416 TNIKQ9UKE5 1360 aa15.04■□□□□ -0
PMS2-202ENST00000380416 ZCCHC11Q5TAX3 1644 aaKnown RBP15.03■□□□□ -0
PMS2-202ENST00000380416 MAGI3Q5TCQ9 1506 aa15.02□□□□□ -0.01
PMS2-202ENST00000380416 KIF27Q86VH2 1401 aa15.01□□□□□ -0.01
PMS2-202ENST00000380416 UACAQ9BZF9 1416 aa15.01□□□□□ -0.01
PMS2-202ENST00000380416 CFAP43Q8NDM7 1665 aa15□□□□□ -0.01
PMS2-202ENST00000380416 CARMIL2Q6F5E8 1435 aa14.99□□□□□ -0.01
PMS2-202ENST00000380416 MADDQ8WXG6 1647 aa14.99□□□□□ -0.01
PMS2-202ENST00000380416 BCORL1Q5H9F3 1711 aa14.98□□□□□ -0.01
PMS2-202ENST00000380416 TTBK1Q5TCY1 1321 aaPredicted RBP14.97□□□□□ -0.01
PMS2-202ENST00000380416 WDR7Q9Y4E6 1490 aa14.97□□□□□ -0.01
PMS2-202ENST00000380416 CD109Q6YHK3 1445 aa14.93□□□□□ -0.02
PMS2-202ENST00000380416 ARAP3Q8WWN8 1544 aa14.93□□□□□ -0.02
PMS2-202ENST00000380416 ZBTB22O15209 634 aa14.92□□□□□ -0.02
PMS2-202ENST00000380416 IGF1RP08069 1367 aa14.92□□□□□ -0.02
PMS2-202ENST00000380416 IQGAP2Q13576 1575 aa14.9□□□□□ -0.02
PMS2-202ENST00000380416 HSPA2P54652 639 aa14.9□□□□□ -0.02
PMS2-202ENST00000380416 DISP1Q96F81 1524 aa14.9□□□□□ -0.02
PMS2-202ENST00000380416 RIMS1Q86UR5 1692 aaKnown RBP14.9□□□□□ -0.02
PMS2-202ENST00000380416 CARMIL1Q5VZK9 1371 aa14.85□□□□□ -0.03
PMS2-202ENST00000380416 FRMPD1Q5SYB0 1578 aa14.8□□□□□ -0.04
PMS2-202ENST00000380416 KIAA0556O60303 1618 aa14.8□□□□□ -0.04
PMS2-202ENST00000380416 UGGT2Q9NYU1 1516 aa14.79□□□□□ -0.04
PMS2-202ENST00000380416 RAPGEF2Q9Y4G8 1499 aa14.77□□□□□ -0.04
PMS2-202ENST00000380416 ARHGEF40Q8TER5 1519 aa14.76□□□□□ -0.05
PMS2-202ENST00000380416 PHLDB1Q86UU1 1377 aa14.76□□□□□ -0.05
PMS2-202ENST00000380416 STRCQ7RTU9 1775 aa14.76□□□□□ -0.05
PMS2-202ENST00000380416 FOXD4L1Q9NU39 408 aa14.75□□□□□ -0.05
PMS2-202ENST00000380416 ARID4BQ4LE39 1312 aaPredicted RBP14.73□□□□□ -0.05
PMS2-202ENST00000380416 KCNH8Q96L42 1107 aa14.73□□□□□ -0.05
PMS2-202ENST00000380416 PREX1Q8TCU6 1659 aa14.73□□□□□ -0.05
PMS2-202ENST00000380416 TTC37Q6PGP7 1564 aa14.73□□□□□ -0.05
PMS2-202ENST00000380416 ABCA9Q8IUA7 1624 aa14.72□□□□□ -0.05
PMS2-202ENST00000380416 YEATS2Q9ULM3 1422 aa14.72□□□□□ -0.05
PMS2-202ENST00000380416 ABCA8O94911 1581 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms