RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 ERCC6Q03468 1493 aa18.29■□□□□ 0.52
USP3-202ENST00000380324 P3H3Q8IVL6 736 aa18.28■□□□□ 0.52
USP3-202ENST00000380324 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.511e-6■■■■□ 20.3
USP3-202ENST00000380324 FHOD3Q2V2M9 1422 aa18.25■□□□□ 0.51
USP3-202ENST00000380324 HNRNPUL2Q1KMD3 747 aaKnown RBP18.25■□□□□ 0.51
USP3-202ENST00000380324 PCF11O94913 1555 aaKnown RBP18.25■□□□□ 0.51
USP3-202ENST00000380324 EFCAB5A4FU69 1503 aa18.25■□□□□ 0.51
USP3-202ENST00000380324 TIAM1Q13009 1591 aa18.22■□□□□ 0.51
USP3-202ENST00000380324 ZNF608Q9ULD9 1512 aaPredicted RBP18.22■□□□□ 0.51
USP3-202ENST00000380324 FHAD1B1AJZ9 1412 aa18.21■□□□□ 0.51
USP3-202ENST00000380324 IFT140Q96RY7 1462 aa18.21■□□□□ 0.51
USP3-202ENST00000380324 ADAMTS12P58397 1594 aa18.21■□□□□ 0.5
USP3-202ENST00000380324 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.5
USP3-202ENST00000380324 GRIN2BQ13224 1484 aa18.17■□□□□ 0.5
USP3-202ENST00000380324 CFAP43Q8NDM7 1665 aa18.17■□□□□ 0.5
USP3-202ENST00000380324 ATP1B4Q9UN42 357 aaPredicted RBP18.16■□□□□ 0.5
USP3-202ENST00000380324 EIF4G3O43432 1585 aaKnown RBP18.15■□□□□ 0.5
USP3-202ENST00000380324 SAMD9Q5K651 1589 aa18.15■□□□□ 0.5
USP3-202ENST00000380324 MAP3K1Q13233 1512 aa18.14■□□□□ 0.49
USP3-202ENST00000380324 FYCO1Q9BQS8 1478 aa18.13■□□□□ 0.49
USP3-202ENST00000380324 LRRC9Q6ZRR7 1453 aa18.11■□□□□ 0.49
USP3-202ENST00000380324 RRBP1Q9P2E9 1410 aaKnown RBP18.11■□□□□ 0.49
USP3-202ENST00000380324 FMN1Q68DA7 1419 aa18.1■□□□□ 0.49
USP3-202ENST00000380324 CASKIN1Q8WXD9 1431 aa18.09■□□□□ 0.49
USP3-202ENST00000380324 IQGAP2Q13576 1575 aa18.09■□□□□ 0.49
USP3-202ENST00000380324 SNAPC4Q5SXM2 1469 aa18.08■□□□□ 0.49
USP3-202ENST00000380324 CCNB3Q8WWL7 1395 aa18.06■□□□□ 0.48
USP3-202ENST00000380324 LRRIQ1Q96JM4 1722 aa18.04■□□□□ 0.48
USP3-202ENST00000380324 PHLDB1Q86UU1 1377 aa18.01■□□□□ 0.47
USP3-202ENST00000380324 GRIN2AQ12879 1464 aa17.99■□□□□ 0.47
USP3-202ENST00000380324 ITGAEP38570 1179 aa17.99■□□□□ 0.47
USP3-202ENST00000380324 MAGI1Q96QZ7 1491 aaPredicted RBP17.97■□□□□ 0.47
USP3-202ENST00000380324 UGGT2Q9NYU1 1516 aa17.94■□□□□ 0.46
USP3-202ENST00000380324 MTUS2Q5JR59 1369 aa17.93■□□□□ 0.46
USP3-202ENST00000380324 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
USP3-202ENST00000380324 SYNJ2O15056 1496 aa17.92■□□□□ 0.46
USP3-202ENST00000380324 HECW1Q76N89 1606 aa17.91■□□□□ 0.46
USP3-202ENST00000380324 FBLN2P98095 1184 aa17.91■□□□□ 0.46
USP3-202ENST00000380324 FAM50AQ14320 339 aaKnown RBP17.91■□□□□ 0.46
USP3-202ENST00000380324 CHMP7Q8WUX9 453 aaPredicted RBP17.9■□□□□ 0.46
USP3-202ENST00000380324 CEP170Q5SW79 1584 aa17.9■□□□□ 0.46
USP3-202ENST00000380324 KIAA0556O60303 1618 aa17.9■□□□□ 0.46
USP3-202ENST00000380324 EHBP1L1Q8N3D4 1523 aa17.87■□□□□ 0.45
USP3-202ENST00000380324 DISP1Q96F81 1524 aa17.87■□□□□ 0.45
USP3-202ENST00000380324 CCDC18Q5T9S5 1454 aa17.87■□□□□ 0.45
USP3-202ENST00000380324 SUPT6HQ7KZ85 1726 aaKnown RBP17.86■□□□□ 0.45
USP3-202ENST00000380324 DHX57Q6P158 1386 aaKnown RBP17.85■□□□□ 0.45
USP3-202ENST00000380324 MAGI3Q5TCQ9 1506 aa17.85■□□□□ 0.45
USP3-202ENST00000380324 ARID3CA6NKF2 412 aa17.84■□□□□ 0.45
USP3-202ENST00000380324 CDK13Q14004 1512 aaKnown RBP17.84■□□□□ 0.45
USP3-202ENST00000380324 EPRSP07814 1512 aaKnown RBP17.84■□□□□ 0.45
USP3-202ENST00000380324 NCOA2Q15596 1464 aa17.83■□□□□ 0.45
USP3-202ENST00000380324 FGD6Q6ZV73 1430 aa17.83■□□□□ 0.44
USP3-202ENST00000380324 RAB3GAP2Q9H2M9 1393 aa17.81■□□□□ 0.44
USP3-202ENST00000380324 NUP160Q12769 1436 aa17.79■□□□□ 0.44
USP3-202ENST00000380324 MYOM3Q5VTT5 1437 aa17.77■□□□□ 0.44
USP3-202ENST00000380324 RAPGEF6Q8TEU7 1601 aa17.77■□□□□ 0.44
USP3-202ENST00000380324 SETD5Q9C0A6 1442 aa17.75■□□□□ 0.43
USP3-202ENST00000380324 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.74■□□□□ 0.433e-6■□□□□ 10.3
USP3-202ENST00000380324 ARHGEF11O15085 1522 aa17.74■□□□□ 0.43
USP3-202ENST00000380324 NUP153P49790 1475 aaKnown RBP17.74■□□□□ 0.43
USP3-202ENST00000380324 CLSPNQ9HAW4 1339 aa17.73■□□□□ 0.43
USP3-202ENST00000380324 PTPN23Q9H3S7 1636 aa17.72■□□□□ 0.43
USP3-202ENST00000380324 CHD1O14646 1710 aa17.72■□□□□ 0.43
USP3-202ENST00000380324 JPH4Q96JJ6 628 aa17.7■□□□□ 0.42
USP3-202ENST00000380324 PLB1Q6P1J6 1458 aa17.7■□□□□ 0.42
USP3-202ENST00000380324 CARMIL2Q6F5E8 1435 aa17.7■□□□□ 0.42
USP3-202ENST00000380324 MAPKBP1O60336 1514 aa17.67■□□□□ 0.42
USP3-202ENST00000380324 PTPRKQ15262 1439 aa17.66■□□□□ 0.42
USP3-202ENST00000380324 ZNF316A6NFI3 1004 aaPredicted RBP17.62■□□□□ 0.41
USP3-202ENST00000380324 TCOF1Q13428 1488 aaKnown RBP17.61■□□□□ 0.41
USP3-202ENST00000380324 DIEXFQ68CQ4 756 aaKnown RBP17.6■□□□□ 0.41
USP3-202ENST00000380324 HFM1A2PYH4 1435 aa17.6■□□□□ 0.41
USP3-202ENST00000380324 PRG4Q92954 1404 aaPredicted RBP17.59■□□□□ 0.41
USP3-202ENST00000380324 CDK11AQ9UQ88 783 aaPredicted RBP17.59■□□□□ 0.41
USP3-202ENST00000380324 MIA2Q96PC5 1412 aa17.58■□□□□ 0.4
USP3-202ENST00000380324 ABCA8O94911 1581 aa17.57■□□□□ 0.4
USP3-202ENST00000380324 KIF14Q15058 1648 aa17.56■□□□□ 0.4
USP3-202ENST00000380324 TROQ12816 1431 aaPredicted RBP17.56■□□□□ 0.4
USP3-202ENST00000380324 NAIPQ13075 1403 aa17.56■□□□□ 0.4
USP3-202ENST00000380324 CHIC2Q9UKJ5 165 aa17.55■□□□□ 0.4
USP3-202ENST00000380324 GCC2Q8IWJ2 1684 aa17.53■□□□□ 0.4
USP3-202ENST00000380324 RRP7BPQ9NSQ0 103 aa17.52■□□□□ 0.4
USP3-202ENST00000380324 ADCY10Q96PN6 1610 aa17.52■□□□□ 0.4
USP3-202ENST00000380324 ITSN2Q9NZM3 1697 aa17.52■□□□□ 0.4
USP3-202ENST00000380324 SHROOM2Q13796 1616 aa17.51■□□□□ 0.39
USP3-202ENST00000380324 PTPRGP23470 1445 aa17.5■□□□□ 0.39
USP3-202ENST00000380324 SIN3AQ96ST3 1273 aa17.49■□□□□ 0.39
USP3-202ENST00000380324 ZNF644Q9H582 1327 aaPredicted RBP17.49■□□□□ 0.39
USP3-202ENST00000380324 UACAQ9BZF9 1416 aa17.49■□□□□ 0.39
USP3-202ENST00000380324 DNMT1P26358 1616 aaKnown RBP17.49■□□□□ 0.39
USP3-202ENST00000380324 NEUROD1Q13562 356 aa17.48■□□□□ 0.39
USP3-202ENST00000380324 ATP10BO94823 1461 aa17.48■□□□□ 0.39
USP3-202ENST00000380324 ERCC6L2Q5T890 1561 aa17.48■□□□□ 0.39
USP3-202ENST00000380324 DAPK1P53355 1430 aa17.47■□□□□ 0.39
USP3-202ENST00000380324 KDM6BO15054 1643 aa17.47■□□□□ 0.39
USP3-202ENST00000380324 CAMSAP2Q08AD1 1489 aa17.46■□□□□ 0.39
USP3-202ENST00000380324 AKNAQ7Z591 1439 aa17.45■□□□□ 0.38
USP3-202ENST00000380324 GPATCH8Q9UKJ3 1502 aaKnown RBP17.45■□□□□ 0.38
USP3-202ENST00000380324 CDC42BPAQ5VT25 1732 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms