RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 PNNQ9H307 717 aaKnown RBP13.75□□□□□ -0.21
CCDC85C-201ENST00000380243 CCDC180Q9P1Z9 1646 aa13.71□□□□□ -0.22
CCDC85C-201ENST00000380243 B4GALNT3Q6L9W6 998 aa13.71□□□□□ -0.22
CCDC85C-201ENST00000380243 HSP90AA2PQ14568 343 aaPredicted RBP13.7□□□□□ -0.22
CCDC85C-201ENST00000380243 CHAF1AQ13111 956 aaPredicted RBP13.69□□□□□ -0.22
CCDC85C-201ENST00000380243 MYH16Q9H6N6 1097 aa13.67□□□□□ -0.22
CCDC85C-201ENST00000380243 ARID4BQ4LE39 1312 aaPredicted RBP13.65□□□□□ -0.22
CCDC85C-201ENST00000380243 AMER1Q5JTC6 1135 aaPredicted RBP13.65□□□□□ -0.22
CCDC85C-201ENST00000380243 MSNP26038 577 aaKnown RBP13.65□□□□□ -0.22
CCDC85C-201ENST00000380243 WDR43Q15061 677 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCDC85C-201ENST00000380243 VSIG10Q8N0Z9 540 aa13.64□□□□□ -0.23
CCDC85C-201ENST00000380243 HIRIP3Q9BW71 556 aaPredicted RBP13.63□□□□□ -0.23
CCDC85C-201ENST00000380243 IPO9Q96P70 1041 aaKnown RBP13.63□□□□□ -0.23
CCDC85C-201ENST00000380243 PRKCSHP14314 528 aaPredicted RBP13.62□□□□□ -0.23
CCDC85C-201ENST00000380243 USP35Q9P2H5 1018 aa13.61□□□□□ -0.23
CCDC85C-201ENST00000380243 EIF4G2P78344 907 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCDC85C-201ENST00000380243 TNNT3P45378 269 aaPredicted RBP13.58□□□□□ -0.23
CCDC85C-201ENST00000380243 CCER2I3L3R5 266 aa13.58□□□□□ -0.24
CCDC85C-201ENST00000380243 RGS3P49796 1198 aa13.56□□□□□ -0.24
CCDC85C-201ENST00000380243 CASC1Q6TDU7 716 aa13.55□□□□□ -0.24
CCDC85C-201ENST00000380243 GOLGA6L6A8MZA4 724 aa13.54□□□□□ -0.24
CCDC85C-201ENST00000380243 GOLGA6L3A6NEY3 463 aa13.54□□□□□ -0.24
CCDC85C-201ENST00000380243 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
CCDC85C-201ENST00000380243 HSCBQ8IWL3 235 aa13.54□□□□□ -0.24
CCDC85C-201ENST00000380243 FANCIQ9NVI1 1328 aa13.54□□□□□ -0.24
CCDC85C-201ENST00000380243 TCERG1O14776 1098 aaKnown RBP13.53□□□□□ -0.24
CCDC85C-201ENST00000380243 ZRSR1Q15695 479 aaKnown RBP13.52□□□□□ -0.24
CCDC85C-201ENST00000380243 HSP90AB1P08238 724 aaKnown RBP13.52□□□□□ -0.24
CCDC85C-201ENST00000380243 NRDCO43847 1150 aa13.52□□□□□ -0.25
CCDC85C-201ENST00000380243 TPRNQ4KMQ1 711 aa13.51□□□□□ -0.25
CCDC85C-201ENST00000380243 ARID3AQ99856 593 aa13.51□□□□□ -0.25
CCDC85C-201ENST00000380243 PLCB2Q00722 1185 aa13.51□□□□□ -0.25
CCDC85C-201ENST00000380243 PKNOX2Q96KN3 472 aa13.51□□□□□ -0.25
CCDC85C-201ENST00000380243 KIAA2012Q0VF49 1180 aa13.51□□□□□ -0.25
CCDC85C-201ENST00000380243 P3H3Q8IVL6 736 aa13.5□□□□□ -0.25
CCDC85C-201ENST00000380243 PTMSP20962 102 aa13.49□□□□□ -0.25
CCDC85C-201ENST00000380243 GBP4Q96PP9 640 aa13.49□□□□□ -0.25
CCDC85C-201ENST00000380243 GZF1Q9H116 711 aaPredicted RBP13.46□□□□□ -0.25
CCDC85C-201ENST00000380243 KDM2AQ9Y2K7 1162 aa13.46□□□□□ -0.25
CCDC85C-201ENST00000380243 FTSJ3Q8IY81 847 aaKnown RBP13.45□□□□□ -0.26
CCDC85C-201ENST00000380243 SENP3-EIF4A1A0A087X0R7 540 aa13.45□□□□□ -0.26
CCDC85C-201ENST00000380243 SPRYD3Q8NCJ5 442 aa13.43□□□□□ -0.26
CCDC85C-201ENST00000380243 DRC7Q8IY82 874 aa13.42□□□□□ -0.26
CCDC85C-201ENST00000380243 GSE1Q14687 1217 aa13.41□□□□□ -0.26
CCDC85C-201ENST00000380243 TIMELESSQ9UNS1 1208 aa13.4□□□□□ -0.26
CCDC85C-201ENST00000380243 ANO8Q9HCE9 1232 aaPredicted RBP13.4□□□□□ -0.26
CCDC85C-201ENST00000380243 ZNF777Q9ULD5 760 aaPredicted RBP13.39□□□□□ -0.27
CCDC85C-201ENST00000380243 SLKQ9H2G2 1235 aaPredicted RBP13.39□□□□□ -0.27
CCDC85C-201ENST00000380243 ARID3CA6NKF2 412 aa13.38□□□□□ -0.27
CCDC85C-201ENST00000380243 CLIP1P30622 1438 aa13.38□□□□□ -0.27
CCDC85C-201ENST00000380243 PODXL2Q9NZ53 605 aa13.36□□□□□ -0.27
CCDC85C-201ENST00000380243 CHIC2Q9UKJ5 165 aa13.36□□□□□ -0.27
CCDC85C-201ENST00000380243 CHMP4BQ9H444 224 aaKnown RBP13.35□□□□□ -0.27
CCDC85C-201ENST00000380243 MS4A1P11836 297 aa13.35□□□□□ -0.27
CCDC85C-201ENST00000380243 A0A0U1RQG5 324 aaPredicted RBP13.34□□□□□ -0.27
CCDC85C-201ENST00000380243 GOLGA6L4A6NEF3 574 aa13.33□□□□□ -0.28
CCDC85C-201ENST00000380243 KNSTRNQ9Y448 316 aa13.33□□□□□ -0.28
CCDC85C-201ENST00000380243 RCAN3Q9UKA8 241 aa13.32□□□□□ -0.28
CCDC85C-201ENST00000380243 SYAP1Q96A49 352 aaPredicted RBP13.31□□□□□ -0.28
CCDC85C-201ENST00000380243 ZBTB7CA1YPR0 619 aa13.31□□□□□ -0.28
CCDC85C-201ENST00000380243 DDX11L8A8MPP1 907 aa13.3□□□□□ -0.28
CCDC85C-201ENST00000380243 FRAT1Q92837 279 aaPredicted RBP13.29□□□□□ -0.28
CCDC85C-201ENST00000380243 FAM13BQ9NYF5 915 aa13.29□□□□□ -0.28
CCDC85C-201ENST00000380243 CEP162Q5TB80 1403 aa13.28□□□□□ -0.28
CCDC85C-201ENST00000380243 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.28□□□□□ -0.28
CCDC85C-201ENST00000380243 CDCA8Q53HL2 280 aa13.27□□□□□ -0.28
CCDC85C-201ENST00000380243 CFAP53Q96M91 514 aa13.27□□□□□ -0.29
CCDC85C-201ENST00000380243 FAM43AQ8N2R8 423 aa13.26□□□□□ -0.29
CCDC85C-201ENST00000380243 RRP7BPQ9NSQ0 103 aa13.26□□□□□ -0.29
CCDC85C-201ENST00000380243 SIN3AQ96ST3 1273 aa13.26□□□□□ -0.29
CCDC85C-201ENST00000380243 MAP7D2Q96T17 732 aa13.25□□□□□ -0.29
CCDC85C-201ENST00000380243 GOLGA6L1Q8N7Z2 621 aa13.25□□□□□ -0.29
CCDC85C-201ENST00000380243 CHGAP10645 457 aaKnown RBP13.25□□□□□ -0.29
CCDC85C-201ENST00000380243 CFAP44Q96MT7 982 aa13.24□□□□□ -0.29
CCDC85C-201ENST00000380243 ZNF771Q7L3S4 317 aaPredicted RBP13.24□□□□□ -0.29
CCDC85C-201ENST00000380243 PHF14O94880 888 aa13.24□□□□□ -0.29
CCDC85C-201ENST00000380243 MTERF4Q7Z6M4 381 aaKnown RBP13.24□□□□□ -0.29
CCDC85C-201ENST00000380243 CSPP1Q1MSJ5 1256 aa13.23□□□□□ -0.29
CCDC85C-201ENST00000380243 MCCP23508 829 aa13.23□□□□□ -0.29
CCDC85C-201ENST00000380243 BRPF3Q9ULD4 1205 aa13.23□□□□□ -0.29
CCDC85C-201ENST00000380243 SKOR2Q2VWA4 1001 aaPredicted RBP13.23□□□□□ -0.29
CCDC85C-201ENST00000380243 RWDD1Q9H446 243 aaPredicted RBP13.22□□□□□ -0.29
CCDC85C-201ENST00000380243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCDC85C-201ENST00000380243 PDE4AP27815 886 aa13.22□□□□□ -0.29
CCDC85C-201ENST00000380243 CALD1Q05682 793 aaKnown RBP13.21□□□□□ -0.29
CCDC85C-201ENST00000380243 NUDCQ9Y266 331 aa13.21□□□□□ -0.3
CCDC85C-201ENST00000380243 SETQ01105 290 aaPredicted RBP13.2□□□□□ -0.3
CCDC85C-201ENST00000380243 FGD1P98174 961 aa13.2□□□□□ -0.3
CCDC85C-201ENST00000380243 TPM2P07951 284 aa13.2□□□□□ -0.3
CCDC85C-201ENST00000380243 RRP9O43818 475 aaKnown RBP13.19□□□□□ -0.3
CCDC85C-201ENST00000380243 TNIKQ9UKE5 1360 aa13.19□□□□□ -0.3
CCDC85C-201ENST00000380243 CARD11Q9BXL7 1154 aa13.18□□□□□ -0.3
CCDC85C-201ENST00000380243 TULP1O00294 542 aaPredicted RBP13.18□□□□□ -0.3
CCDC85C-201ENST00000380243 IL27Q8NEV9 243 aa13.17□□□□□ -0.3
CCDC85C-201ENST00000380243 KCNJ4P48050 445 aa13.17□□□□□ -0.3
CCDC85C-201ENST00000380243 EEA1Q15075 1411 aa13.16□□□□□ -0.3
CCDC85C-201ENST00000380243 RALBP1Q15311 655 aa13.15□□□□□ -0.3
CCDC85C-201ENST00000380243 CC2D1BQ5T0F9 858 aaKnown RBP13.15□□□□□ -0.3
CCDC85C-201ENST00000380243 STAG3Q9UJ98 1225 aa13.15□□□□□ -0.3
CCDC85C-201ENST00000380243 MTUS2Q5JR59 1369 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms