RNA–Protein interactions for RNA: ENST00000378883.5

MCM8-202, Transcript of minichromosome maintenance 8 homologous recombination repair factor, humanhuman

TSL 1 (best) BASIC

Gene MCM8, Length 3,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM8-202ENST00000378883 EIF5BO60841 1220 aaKnown RBP12.15□□□□□ -0.46
MCM8-202ENST00000378883 ANP32AP39687 249 aaKnown RBP12.15□□□□□ -0.46
MCM8-202ENST00000378883 ZBTB47Q9UFB7 747 aaPredicted RBP12.15□□□□□ -0.46
MCM8-202ENST00000378883 CEP164Q9UPV0 1460 aa12.15□□□□□ -0.47
MCM8-202ENST00000378883 WASHC2AQ641Q2 1341 aa12.14□□□□□ -0.47
MCM8-202ENST00000378883 CUX2O14529 1486 aa12.13□□□□□ -0.47
MCM8-202ENST00000378883 PKNOX2Q96KN3 472 aa12.13□□□□□ -0.47
MCM8-202ENST00000378883 WDR97A6NE52 1622 aa12.12□□□□□ -0.47
MCM8-202ENST00000378883 C11orf95C9JLR9 678 aaPredicted RBP12.12□□□□□ -0.47
MCM8-202ENST00000378883 HIRIP3Q9BW71 556 aaPredicted RBP12.12□□□□□ -0.47
MCM8-202ENST00000378883 MAPKBP1O60336 1514 aa12.09□□□□□ -0.47
MCM8-202ENST00000378883 KIF21BO75037 1637 aa12.09□□□□□ -0.47
MCM8-202ENST00000378883 RRBP1Q9P2E9 1410 aaKnown RBP12.08□□□□□ -0.48
MCM8-202ENST00000378883 WASHC2CQ9Y4E1 1318 aa12.07□□□□□ -0.48
MCM8-202ENST00000378883 KANK4Q5T7N3 995 aaPredicted RBP12.06□□□□□ -0.48
MCM8-202ENST00000378883 USP35Q9P2H5 1018 aa12.06□□□□□ -0.48
MCM8-202ENST00000378883 RAB3GAP2Q9H2M9 1393 aa12.05□□□□□ -0.48
MCM8-202ENST00000378883 NEFMP07197 916 aa12.05□□□□□ -0.48
MCM8-202ENST00000378883 SIN3AQ96ST3 1273 aa12.05□□□□□ -0.48
MCM8-202ENST00000378883 BAZ1BQ9UIG0 1483 aaKnown RBP12.04□□□□□ -0.48
MCM8-202ENST00000378883 BRPF3Q9ULD4 1205 aa12.04□□□□□ -0.48
MCM8-202ENST00000378883 CCNB3Q8WWL7 1395 aa12.02□□□□□ -0.49
MCM8-202ENST00000378883 TIMELESSQ9UNS1 1208 aa12.01□□□□□ -0.49
MCM8-202ENST00000378883 LAS1LQ9Y4W2 734 aaKnown RBP12□□□□□ -0.49
MCM8-202ENST00000378883 RSPH6AQ9H0K4 717 aa11.99□□□□□ -0.49
MCM8-202ENST00000378883 RAPGEF2Q9Y4G8 1499 aa11.99□□□□□ -0.49
MCM8-202ENST00000378883 TOP2AP11388 1531 aaKnown RBP11.98□□□□□ -0.49
MCM8-202ENST00000378883 SMARCA2P51531 1590 aa11.97□□□□□ -0.49
MCM8-202ENST00000378883 ATP1B4Q9UN42 357 aaPredicted RBP11.97□□□□□ -0.49
MCM8-202ENST00000378883 PPM1GO15355 546 aaPredicted RBP11.95□□□□□ -0.5
MCM8-202ENST00000378883 GSE1Q14687 1217 aa11.94□□□□□ -0.5
MCM8-202ENST00000378883 SETD5Q9C0A6 1442 aa11.94□□□□□ -0.5
MCM8-202ENST00000378883 GLIPR1L2Q4G1C9 344 aa11.93□□□□□ -0.5
MCM8-202ENST00000378883 NPM2Q86SE8 214 aaKnown RBP11.93□□□□□ -0.5
MCM8-202ENST00000378883 ARAP1Q96P48 1450 aa11.92□□□□□ -0.5
MCM8-202ENST00000378883 ZBED9Q6R2W3 1325 aa11.92□□□□□ -0.5
MCM8-202ENST00000378883 CCDC184Q52MB2 194 aa11.89□□□□□ -0.51
MCM8-202ENST00000378883 NCAPD3P42695 1498 aa11.89□□□□□ -0.51
MCM8-202ENST00000378883 FAM9BQ8IZU0 186 aa11.89□□□□□ -0.51
MCM8-202ENST00000378883 ZMYND15Q9H091 742 aa11.88□□□□□ -0.51
MCM8-202ENST00000378883 FAM43AQ8N2R8 423 aa11.88□□□□□ -0.51
MCM8-202ENST00000378883 VSIG10Q8N0Z9 540 aa11.86□□□□□ -0.51
MCM8-202ENST00000378883 FRAT1Q92837 279 aaPredicted RBP11.86□□□□□ -0.51
MCM8-202ENST00000378883 SYNJ1O43426 1573 aa11.85□□□□□ -0.51
MCM8-202ENST00000378883 TONSLQ96HA7 1378 aa11.85□□□□□ -0.51
MCM8-202ENST00000378883 AKNAQ7Z591 1439 aa11.85□□□□□ -0.51
MCM8-202ENST00000378883 PODXL2Q9NZ53 605 aa11.84□□□□□ -0.51
MCM8-202ENST00000378883 PEG3Q9GZU2 1588 aa11.83□□□□□ -0.51
MCM8-202ENST00000378883 MRS2Q9HD23 443 aa11.83□□□□□ -0.52
MCM8-202ENST00000378883 UNC13AQ9UPW8 1703 aa11.83□□□□□ -0.52
MCM8-202ENST00000378883 PLEKHG5O94827 1062 aa11.83□□□□□ -0.52
MCM8-202ENST00000378883 NFKBIBQ15653 356 aa11.83□□□□□ -0.52
MCM8-202ENST00000378883 PDE4AP27815 886 aa11.82□□□□□ -0.52
MCM8-202ENST00000378883 RNF123Q5XPI4 1314 aa11.82□□□□□ -0.52
MCM8-202ENST00000378883 TCERG1O14776 1098 aaKnown RBP11.82□□□□□ -0.52
MCM8-202ENST00000378883 SMG6Q86US8 1419 aaKnown RBP11.81□□□□□ -0.52
MCM8-202ENST00000378883 BACH2Q9BYV9 841 aa11.8□□□□□ -0.52
MCM8-202ENST00000378883 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
MCM8-202ENST00000378883 FHAD1B1AJZ9 1412 aa11.79□□□□□ -0.52
MCM8-202ENST00000378883 NUDCQ9Y266 331 aa11.79□□□□□ -0.52
MCM8-202ENST00000378883 DDRGK1Q96HY6 314 aa11.78□□□□□ -0.52
MCM8-202ENST00000378883 FAM50AQ14320 339 aaKnown RBP11.77□□□□□ -0.53
MCM8-202ENST00000378883 DCAF11Q8TEB1 546 aa11.77□□□□□ -0.53
MCM8-202ENST00000378883 CNTLNQ9NXG0 1405 aa11.77□□□□□ -0.53
MCM8-202ENST00000378883 ERICH3Q5RHP9 1530 aa11.75□□□□□ -0.53
MCM8-202ENST00000378883 HSPA5P11021 654 aaKnown RBP11.75□□□□□ -0.53
MCM8-202ENST00000378883 MS4A1P11836 297 aa11.75□□□□□ -0.53
MCM8-202ENST00000378883 SMARCA4P51532 1647 aa11.75□□□□□ -0.53
MCM8-202ENST00000378883 NCOA2Q15596 1464 aa11.74□□□□□ -0.53
MCM8-202ENST00000378883 HSP90AA2PQ14568 343 aaPredicted RBP11.73□□□□□ -0.53
MCM8-202ENST00000378883 PRXQ9BXM0 1461 aa11.72□□□□□ -0.53
MCM8-202ENST00000378883 CNGB1Q14028 1251 aaPredicted RBP11.72□□□□□ -0.53
MCM8-202ENST00000378883 PHLDB1Q86UU1 1377 aa11.71□□□□□ -0.53
MCM8-202ENST00000378883 RRAGDQ9NQL2 400 aaPredicted RBP11.71□□□□□ -0.54
MCM8-202ENST00000378883 RRP9O43818 475 aaKnown RBP11.71□□□□□ -0.54
MCM8-202ENST00000378883 DAXXQ9UER7 740 aaPredicted RBP11.71□□□□□ -0.54
MCM8-202ENST00000378883 SLC4A3P48751 1232 aa11.7□□□□□ -0.54
MCM8-202ENST00000378883 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
MCM8-202ENST00000378883 EIF4G2P78344 907 aaKnown RBP eCLIP11.69□□□□□ -0.54
MCM8-202ENST00000378883 ARHGAP35Q9NRY4 1499 aa11.69□□□□□ -0.54
MCM8-202ENST00000378883 FRAT2O75474 233 aaPredicted RBP11.68□□□□□ -0.54
MCM8-202ENST00000378883 EXOC6Q8TAG9 804 aa11.68□□□□□ -0.54
MCM8-202ENST00000378883 TIAM1Q13009 1591 aa11.68□□□□□ -0.54
MCM8-202ENST00000378883 HSP90AA1P07900 732 aaKnown RBP11.67□□□□□ -0.54
MCM8-202ENST00000378883 NAP1L5Q96NT1 182 aaPredicted RBP11.67□□□□□ -0.54
MCM8-202ENST00000378883 KDM5BQ9UGL1 1544 aa11.66□□□□□ -0.54
MCM8-202ENST00000378883 MAP3K1Q13233 1512 aa11.66□□□□□ -0.54
MCM8-202ENST00000378883 CCDC7Q96M83 1385 aa11.66□□□□□ -0.54
MCM8-202ENST00000378883 LRRC9Q6ZRR7 1453 aa11.66□□□□□ -0.54
MCM8-202ENST00000378883 P3H3Q8IVL6 736 aa11.65□□□□□ -0.54
MCM8-202ENST00000378883 RRP1P56182 461 aaKnown RBP11.64□□□□□ -0.55
MCM8-202ENST00000378883 NCOA1Q15788 1441 aa11.63□□□□□ -0.55
MCM8-202ENST00000378883 PNNQ9H307 717 aaKnown RBP11.63□□□□□ -0.55
MCM8-202ENST00000378883 UACAQ9BZF9 1416 aa11.62□□□□□ -0.55
MCM8-202ENST00000378883 SENP3-EIF4A1A0A087X0R7 540 aa11.62□□□□□ -0.55
MCM8-202ENST00000378883 CCDC18Q5T9S5 1454 aa11.61□□□□□ -0.55
MCM8-202ENST00000378883 ARID3CA6NKF2 412 aa11.6□□□□□ -0.55
MCM8-202ENST00000378883 L1TD1Q5T7N2 865 aaKnown RBP11.59□□□□□ -0.55
MCM8-202ENST00000378883 TOP2BQ02880 1626 aa11.59□□□□□ -0.55
MCM8-202ENST00000378883 CLCN1P35523 988 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms