RNA–Protein interactions for RNA: ENST00000378163.5

CASK-203, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CASK, Length 4,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-203ENST00000378163 TSPY4P0CV99 314 aa22.83■■□□□ 1.24
CASK-203ENST00000378163 TSPY10P0CW01 314 aa22.83■■□□□ 1.24
CASK-203ENST00000378163 SENP3Q9H4L4 574 aaPredicted RBP22.82■■□□□ 1.24
CASK-203ENST00000378163 SLC24A1O60721 1099 aa22.81■■□□□ 1.24
CASK-203ENST00000378163 VPS8Q8N3P4 1428 aa22.8■■□□□ 1.24
CASK-203ENST00000378163 KCNH8Q96L42 1107 aa22.78■■□□□ 1.24
CASK-203ENST00000378163 CANXP27824 592 aaKnown RBP22.78■■□□□ 1.24
CASK-203ENST00000378163 TOP2AP11388 1531 aaKnown RBP22.76■■□□□ 1.23
CASK-203ENST00000378163 IRX6P78412 446 aaPredicted RBP22.75■■□□□ 1.23
CASK-203ENST00000378163 NPM1P06748 294 aaKnown RBP eCLIP22.71■■□□□ 1.23
CASK-203ENST00000378163 MRS2Q9HD23 443 aa22.71■■□□□ 1.23
CASK-203ENST00000378163 CCNB3Q8WWL7 1395 aa22.7■■□□□ 1.22
CASK-203ENST00000378163 TMC1Q8TDI8 760 aa22.7■■□□□ 1.22
CASK-203ENST00000378163 NPM2Q86SE8 214 aaKnown RBP22.69■■□□□ 1.22
CASK-203ENST00000378163 RGL3Q3MIN7 710 aa22.68■■□□□ 1.22
CASK-203ENST00000378163 STAG3Q9UJ98 1225 aa22.66■■□□□ 1.22
CASK-203ENST00000378163 RAPGEF2Q9Y4G8 1499 aa22.63■■□□□ 1.21
CASK-203ENST00000378163 EIF4G2P78344 907 aaKnown RBP eCLIP22.61■■□□□ 1.21
CASK-203ENST00000378163 PLEKHD1A6NEE1 506 aa22.6■■□□□ 1.21
CASK-203ENST00000378163 ESF1Q9H501 851 aaKnown RBP22.6■■□□□ 1.21
CASK-203ENST00000378163 NEFMP07197 916 aa22.59■■□□□ 1.21
CASK-203ENST00000378163 CUX2O14529 1486 aa22.59■■□□□ 1.21
CASK-203ENST00000378163 SUPT16HQ9Y5B9 1047 aaKnown RBP22.58■■□□□ 1.21
CASK-203ENST00000378163 SMARCA4P51532 1647 aa22.57■■□□□ 1.2
CASK-203ENST00000378163 CARMIL1Q5VZK9 1371 aa22.57■■□□□ 1.2
CASK-203ENST00000378163 CFDP1Q9UEE9 299 aaPredicted RBP22.57■■□□□ 1.2
CASK-203ENST00000378163 ZBTB47Q9UFB7 747 aaPredicted RBP22.56■■□□□ 1.2
CASK-203ENST00000378163 CCDC136Q96JN2 1154 aa22.47■■□□□ 1.19
CASK-203ENST00000378163 RAB3GAP2Q9H2M9 1393 aa22.46■■□□□ 1.19
CASK-203ENST00000378163 ANP32AP39687 249 aaKnown RBP22.46■■□□□ 1.19
CASK-203ENST00000378163 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
CASK-203ENST00000378163 ATAD2BQ9ULI0 1458 aa22.45■■□□□ 1.18
CASK-203ENST00000378163 SETD5Q9C0A6 1442 aa22.4■■□□□ 1.18
CASK-203ENST00000378163 DHX57Q6P158 1386 aaKnown RBP22.39■■□□□ 1.17
CASK-203ENST00000378163 WDR43Q15061 677 aaKnown RBP eCLIP22.37■■□□□ 1.17
CASK-203ENST00000378163 FHAD1B1AJZ9 1412 aa22.37■■□□□ 1.17
CASK-203ENST00000378163 TDRD9Q8NDG6 1382 aaKnown RBP22.34■■□□□ 1.17
CASK-203ENST00000378163 FOXD1Q16676 465 aa22.34■■□□□ 1.17
CASK-203ENST00000378163 PLEKHG5O94827 1062 aa22.33■■□□□ 1.17
CASK-203ENST00000378163 CARD11Q9BXL7 1154 aa22.33■■□□□ 1.16
CASK-203ENST00000378163 PPP1R15AO75807 674 aaPredicted RBP22.24■■□□□ 1.15
CASK-203ENST00000378163 TIMELESSQ9UNS1 1208 aa22.23■■□□□ 1.15
CASK-203ENST00000378163 NBR1Q14596 966 aa22.22■■□□□ 1.15
CASK-203ENST00000378163 FHOD3Q2V2M9 1422 aa22.22■■□□□ 1.15
CASK-203ENST00000378163 ARHGAP35Q9NRY4 1499 aa22.21■■□□□ 1.15
CASK-203ENST00000378163 ERCC6Q03468 1493 aa22.2■■□□□ 1.15
CASK-203ENST00000378163 EIF4G1Q04637 1599 aaKnown RBP22.19■■□□□ 1.14
CASK-203ENST00000378163 HSPA5P11021 654 aaKnown RBP22.19■■□□□ 1.14
CASK-203ENST00000378163 DCAF11Q8TEB1 546 aa22.18■■□□□ 1.14
CASK-203ENST00000378163 ANP32EQ9BTT0 268 aa22.17■■□□□ 1.14
CASK-203ENST00000378163 NEUROD2Q15784 382 aa22.17■■□□□ 1.14
CASK-203ENST00000378163 CCER2I3L3R5 266 aa22.14■■□□□ 1.14
CASK-203ENST00000378163 CADPSQ9ULU8 1353 aa22.14■■□□□ 1.13
CASK-203ENST00000378163 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.13
CASK-203ENST00000378163 KIF21BO75037 1637 aa22.13■■□□□ 1.13
CASK-203ENST00000378163 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.13■■□□□ 1.13
CASK-203ENST00000378163 PPM1GO15355 546 aaPredicted RBP22.12■■□□□ 1.13
CASK-203ENST00000378163 B4GALNT3Q6L9W6 998 aa22.12■■□□□ 1.13
CASK-203ENST00000378163 KNSTRNQ9Y448 316 aa22.12■■□□□ 1.13
CASK-203ENST00000378163 TSHZ2Q9NRE2 1034 aa22.11■■□□□ 1.13
CASK-203ENST00000378163 CC2D1BQ5T0F9 858 aaKnown RBP22.11■■□□□ 1.13
CASK-203ENST00000378163 HSP90AA1P07900 732 aaKnown RBP22.1■■□□□ 1.13
CASK-203ENST00000378163 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
CASK-203ENST00000378163 PKD2Q13563 968 aa22.07■■□□□ 1.12
CASK-203ENST00000378163 IGF1RP08069 1367 aa22.06■■□□□ 1.12
CASK-203ENST00000378163 RBM19Q9Y4C8 960 aaKnown RBP22.05■■□□□ 1.12
CASK-203ENST00000378163 UPF2Q9HAU5 1272 aaKnown RBP22.05■■□□□ 1.12
CASK-203ENST00000378163 ARXQ96QS3 562 aa22.05■■□□□ 1.12
CASK-203ENST00000378163 ZBTB7CA1YPR0 619 aa22.04■■□□□ 1.12
CASK-203ENST00000378163 MPHOSPH9Q99550 1183 aa22.04■■□□□ 1.12
CASK-203ENST00000378163 C14orf37Q86TY3 774 aa22.03■■□□□ 1.12
CASK-203ENST00000378163 ARID4BQ4LE39 1312 aaPredicted RBP22.03■■□□□ 1.12
CASK-203ENST00000378163 PPP4R2Q9NY27 417 aa22.03■■□□□ 1.12
CASK-203ENST00000378163 FMN1Q68DA7 1419 aa22.02■■□□□ 1.12
CASK-203ENST00000378163 L3MBTL2Q969R5 705 aa22.01■■□□□ 1.11
CASK-203ENST00000378163 ARAP1Q96P48 1450 aa22.01■■□□□ 1.11
CASK-203ENST00000378163 SAFB2Q14151 953 aaKnown RBP eCLIP21.97■■□□□ 1.11
CASK-203ENST00000378163 PHLDB1Q86UU1 1377 aa21.96■■□□□ 1.11
CASK-203ENST00000378163 MLECQ14165 292 aa21.95■■□□□ 1.1
CASK-203ENST00000378163 GGT6Q6P531 493 aa21.95■■□□□ 1.1
CASK-203ENST00000378163 CDCA8Q53HL2 280 aa21.93■■□□□ 1.1
CASK-203ENST00000378163 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
CASK-203ENST00000378163 POGKQ9P215 609 aa21.9■■□□□ 1.1
CASK-203ENST00000378163 HNRNPMP52272 730 aaKnown RBP eCLIP21.88■■□□□ 1.09
CASK-203ENST00000378163 FGD5Q6ZNL6 1462 aa21.88■■□□□ 1.09
CASK-203ENST00000378163 FRAT1Q92837 279 aaPredicted RBP21.88■■□□□ 1.09
CASK-203ENST00000378163 LAS1LQ9Y4W2 734 aaKnown RBP21.88■■□□□ 1.09
CASK-203ENST00000378163 A0A0G2JS52 829 aa21.87■■□□□ 1.09
CASK-203ENST00000378163 CFAP53Q96M91 514 aa21.87■■□□□ 1.09
CASK-203ENST00000378163 NUP155O75694 1391 aa21.87■■□□□ 1.09
CASK-203ENST00000378163 RGS3P49796 1198 aa21.86■■□□□ 1.09
CASK-203ENST00000378163 FANCD2Q9BXW9 1451 aa21.86■■□□□ 1.09
CASK-203ENST00000378163 RAD54L2Q9Y4B4 1467 aa21.86■■□□□ 1.09
CASK-203ENST00000378163 U2SURPO15042 1029 aaKnown RBP21.84■■□□□ 1.09
CASK-203ENST00000378163 TMF1P82094 1093 aa21.83■■□□□ 1.09
CASK-203ENST00000378163 PRXQ9BXM0 1461 aa21.83■■□□□ 1.09
CASK-203ENST00000378163 JPH4Q96JJ6 628 aa21.82■■□□□ 1.08
CASK-203ENST00000378163 SOX12O15370 315 aa21.82■■□□□ 1.08
CASK-203ENST00000378163 STK26Q9P289 416 aa21.81■■□□□ 1.08
CASK-203ENST00000378163 NCAPD3P42695 1498 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms