RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 EIF4G3O43432 1585 aaKnown RBP25.92■■□□□ 1.74
HLA-A-202ENST00000376806 APLP2Q06481 763 aa25.92■■□□□ 1.74
HLA-A-202ENST00000376806 EFCAB5A4FU69 1503 aa25.9■■□□□ 1.74
HLA-A-202ENST00000376806 ADAMTS12P58397 1594 aa25.89■■□□□ 1.74
HLA-A-202ENST00000376806 GRIN2BQ13224 1484 aa25.83■■□□□ 1.73
HLA-A-202ENST00000376806 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
HLA-A-202ENST00000376806 SAMD9Q5K651 1589 aa25.78■■□□□ 1.72
HLA-A-202ENST00000376806 PCF11O94913 1555 aaKnown RBP25.77■■□□□ 1.72
HLA-A-202ENST00000376806 CFAP43Q8NDM7 1665 aa25.75■■□□□ 1.71
HLA-A-202ENST00000376806 TIAM1Q13009 1591 aa25.75■■□□□ 1.71
HLA-A-202ENST00000376806 MAP3K1Q13233 1512 aa25.74■■□□□ 1.71
HLA-A-202ENST00000376806 SNAPC4Q5SXM2 1469 aa25.73■■□□□ 1.71
HLA-A-202ENST00000376806 FHOD3Q2V2M9 1422 aa25.73■■□□□ 1.71
HLA-A-202ENST00000376806 ZEB1P37275 1124 aaPredicted RBP25.67■■□□□ 1.7
HLA-A-202ENST00000376806 KANK4Q5T7N3 995 aaPredicted RBP25.67■■□□□ 1.7
HLA-A-202ENST00000376806 IQGAP2Q13576 1575 aa25.66■■□□□ 1.7
HLA-A-202ENST00000376806 FYCO1Q9BQS8 1478 aa25.66■■□□□ 1.7
HLA-A-202ENST00000376806 MAGI1Q96QZ7 1491 aaPredicted RBP25.65■■□□□ 1.7
HLA-A-202ENST00000376806 P3H3Q8IVL6 736 aa25.64■■□□□ 1.69
HLA-A-202ENST00000376806 CASKIN1Q8WXD9 1431 aa25.61■■□□□ 1.69
HLA-A-202ENST00000376806 FMN1Q68DA7 1419 aa25.6■■□□□ 1.69
HLA-A-202ENST00000376806 FBLN2P98095 1184 aa25.6■■□□□ 1.69
HLA-A-202ENST00000376806 CHMP7Q8WUX9 453 aaPredicted RBP25.57■■□□□ 1.68
HLA-A-202ENST00000376806 SYNJ2O15056 1496 aa25.56■■□□□ 1.68
HLA-A-202ENST00000376806 LRRC9Q6ZRR7 1453 aa25.56■■□□□ 1.68
HLA-A-202ENST00000376806 GRIN2AQ12879 1464 aa25.55■■□□□ 1.68
HLA-A-202ENST00000376806 RRBP1Q9P2E9 1410 aaKnown RBP25.54■■□□□ 1.68
HLA-A-202ENST00000376806 LRRIQ1Q96JM4 1722 aa25.53■■□□□ 1.68
HLA-A-202ENST00000376806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.53■■□□□ 1.68
HLA-A-202ENST00000376806 UGGT2Q9NYU1 1516 aa25.5■■□□□ 1.67
HLA-A-202ENST00000376806 CHD1O14646 1710 aa25.47■■□□□ 1.67
HLA-A-202ENST00000376806 KIAA0586Q9BVV6 1533 aa25.47■■□□□ 1.67
HLA-A-202ENST00000376806 HNRNPUL2Q1KMD3 747 aaKnown RBP25.46■■□□□ 1.67
HLA-A-202ENST00000376806 CCER1Q8TC90 406 aaPredicted RBP25.46■■□□□ 1.67
HLA-A-202ENST00000376806 CEP170Q5SW79 1584 aa25.43■■□□□ 1.66
HLA-A-202ENST00000376806 KIAA0556O60303 1618 aa25.41■■□□□ 1.66
HLA-A-202ENST00000376806 ATP1B4Q9UN42 357 aaPredicted RBP25.4■■□□□ 1.66
HLA-A-202ENST00000376806 CCNB3Q8WWL7 1395 aa25.4■■□□□ 1.66
HLA-A-202ENST00000376806 HECW1Q76N89 1606 aa25.4■■□□□ 1.66
HLA-A-202ENST00000376806 NUP160Q12769 1436 aa25.35■■□□□ 1.65
HLA-A-202ENST00000376806 DISP1Q96F81 1524 aa25.35■■□□□ 1.65
HLA-A-202ENST00000376806 PHLDB1Q86UU1 1377 aa25.34■■□□□ 1.65
HLA-A-202ENST00000376806 CCDC18Q5T9S5 1454 aa25.32■■□□□ 1.64
HLA-A-202ENST00000376806 EHBP1L1Q8N3D4 1523 aa25.3■■□□□ 1.64
HLA-A-202ENST00000376806 SUPT6HQ7KZ85 1726 aaKnown RBP25.28■■□□□ 1.64
HLA-A-202ENST00000376806 OSCARQ8IYS5 282 aa25.28■■□□□ 1.64
HLA-A-202ENST00000376806 MTUS2Q5JR59 1369 aa25.25■■□□□ 1.63
HLA-A-202ENST00000376806 EPRSP07814 1512 aaKnown RBP25.23■■□□□ 1.63
HLA-A-202ENST00000376806 RAPGEF6Q8TEU7 1601 aa25.22■■□□□ 1.63
HLA-A-202ENST00000376806 MAGI3Q5TCQ9 1506 aa25.21■■□□□ 1.63
HLA-A-202ENST00000376806 CLASP1Q7Z460 1538 aa25.19■■□□□ 1.62
HLA-A-202ENST00000376806 CDK13Q14004 1512 aaKnown RBP25.18■■□□□ 1.62
HLA-A-202ENST00000376806 NCOA2Q15596 1464 aa25.18■■□□□ 1.62
HLA-A-202ENST00000376806 JPH4Q96JJ6 628 aa25.17■■□□□ 1.62
HLA-A-202ENST00000376806 ARHGEF11O15085 1522 aa25.16■■□□□ 1.62
HLA-A-202ENST00000376806 FGD6Q6ZV73 1430 aa25.15■■□□□ 1.62
HLA-A-202ENST00000376806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.13■■□□□ 1.61
HLA-A-202ENST00000376806 CARMIL2Q6F5E8 1435 aa25.12■■□□□ 1.61
HLA-A-202ENST00000376806 NUP153P49790 1475 aaKnown RBP25.11■■□□□ 1.61
HLA-A-202ENST00000376806 MYOM3Q5VTT5 1437 aa25.1■■□□□ 1.61
HLA-A-202ENST00000376806 ITGAEP38570 1179 aa25.09■■□□□ 1.61
HLA-A-202ENST00000376806 FAM50AQ14320 339 aaKnown RBP25.08■■□□□ 1.61
HLA-A-202ENST00000376806 SHROOM2Q13796 1616 aa25.06■■□□□ 1.6
HLA-A-202ENST00000376806 DHX57Q6P158 1386 aaKnown RBP25.05■■□□□ 1.6
HLA-A-202ENST00000376806 PTPN23Q9H3S7 1636 aa25.04■■□□□ 1.6
HLA-A-202ENST00000376806 PRG4Q92954 1404 aaPredicted RBP25.04■■□□□ 1.6
HLA-A-202ENST00000376806 ERCC6L2Q5T890 1561 aa25.02■■□□□ 1.6
HLA-A-202ENST00000376806 PLB1Q6P1J6 1458 aa25.01■■□□□ 1.59
HLA-A-202ENST00000376806 RAB3GAP2Q9H2M9 1393 aa24.99■■□□□ 1.59
HLA-A-202ENST00000376806 ABCA8O94911 1581 aa24.99■■□□□ 1.59
HLA-A-202ENST00000376806 SETD5Q9C0A6 1442 aa24.98■■□□□ 1.59
HLA-A-202ENST00000376806 CLSPNQ9HAW4 1339 aa24.98■■□□□ 1.59
HLA-A-202ENST00000376806 ARID3CA6NKF2 412 aa24.96■■□□□ 1.59
HLA-A-202ENST00000376806 TCOF1Q13428 1488 aaKnown RBP24.96■■□□□ 1.59
HLA-A-202ENST00000376806 ADCY10Q96PN6 1610 aa24.93■■□□□ 1.58
HLA-A-202ENST00000376806 MIA2Q96PC5 1412 aa24.9■■□□□ 1.58
HLA-A-202ENST00000376806 TROQ12816 1431 aaPredicted RBP24.87■■□□□ 1.57
HLA-A-202ENST00000376806 PTPRKQ15262 1439 aa24.87■■□□□ 1.57
HLA-A-202ENST00000376806 ITSN2Q9NZM3 1697 aa24.86■■□□□ 1.57
HLA-A-202ENST00000376806 CDK11AQ9UQ88 783 aaPredicted RBP24.85■■□□□ 1.57
HLA-A-202ENST00000376806 KIF14Q15058 1648 aa24.84■■□□□ 1.57
HLA-A-202ENST00000376806 MAPKBP1O60336 1514 aa24.83■■□□□ 1.57
HLA-A-202ENST00000376806 GCC2Q8IWJ2 1684 aa24.82■■□□□ 1.56
HLA-A-202ENST00000376806 HFM1A2PYH4 1435 aa24.82■■□□□ 1.56
HLA-A-202ENST00000376806 PTPRGP23470 1445 aa24.81■■□□□ 1.56
HLA-A-202ENST00000376806 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
HLA-A-202ENST00000376806 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
HLA-A-202ENST00000376806 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
HLA-A-202ENST00000376806 ATP10BO94823 1461 aa24.78■■□□□ 1.56
HLA-A-202ENST00000376806 DNMT1P26358 1616 aaKnown RBP24.76■■□□□ 1.55
HLA-A-202ENST00000376806 NAIPQ13075 1403 aa24.74■■□□□ 1.55
HLA-A-202ENST00000376806 AKNAQ7Z591 1439 aa24.73■■□□□ 1.55
HLA-A-202ENST00000376806 DNAJC5Q9H3Z4 198 aa24.72■■□□□ 1.55
HLA-A-202ENST00000376806 CDC42BPAQ5VT25 1732 aa24.72■■□□□ 1.55
HLA-A-202ENST00000376806 UACAQ9BZF9 1416 aa24.69■■□□□ 1.54
HLA-A-202ENST00000376806 GPATCH8Q9UKJ3 1502 aaKnown RBP24.69■■□□□ 1.54
HLA-A-202ENST00000376806 CYB5RLQ6IPT4 315 aa24.68■■□□□ 1.54
HLA-A-202ENST00000376806 DAPK1P53355 1430 aa24.67■■□□□ 1.54
HLA-A-202ENST00000376806 CAMSAP2Q08AD1 1489 aa24.67■■□□□ 1.54
HLA-A-202ENST00000376806 ABCC2Q92887 1545 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms