RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
CLCN6-205ENST00000376492 ABCC10Q5T3U5 1492 aa23.35■■□□□ 1.33
CLCN6-205ENST00000376492 FAM69CQ0P6D2 419 aa23.34■■□□□ 1.33
CLCN6-205ENST00000376492 MAPKBP1O60336 1514 aa23.32■■□□□ 1.32
CLCN6-205ENST00000376492 ADCY10Q96PN6 1610 aa23.31■■□□□ 1.32
CLCN6-205ENST00000376492 NPM1P06748 294 aaKnown RBP eCLIP23.29■■□□□ 1.32
CLCN6-205ENST00000376492 DIP2BQ9P265 1576 aa23.29■■□□□ 1.32
CLCN6-205ENST00000376492 KIAA0586Q9BVV6 1533 aa23.26■■□□□ 1.31
CLCN6-205ENST00000376492 IGF1RP08069 1367 aa23.25■■□□□ 1.31
CLCN6-205ENST00000376492 KIF27Q86VH2 1401 aa23.19■■□□□ 1.3
CLCN6-205ENST00000376492 CUL7Q14999 1698 aa23.18■■□□□ 1.3
CLCN6-205ENST00000376492 KDM6BO15054 1643 aa23.15■■□□□ 1.3
CLCN6-205ENST00000376492 TTBK1Q5TCY1 1321 aaPredicted RBP23.11■■□□□ 1.29
CLCN6-205ENST00000376492 PTPRGP23470 1445 aa23.11■■□□□ 1.29
CLCN6-205ENST00000376492 KDM4FA0A1W2PPD8 638 aa23.09■■□□□ 1.29
CLCN6-205ENST00000376492 TSPOAP1O95153 1857 aa23.09■■□□□ 1.29
CLCN6-205ENST00000376492 CARMIL1Q5VZK9 1371 aa23.07■■□□□ 1.28
CLCN6-205ENST00000376492 ABCC2Q92887 1545 aa23.04■■□□□ 1.28
CLCN6-205ENST00000376492 TNIKQ9UKE5 1360 aa23.03■■□□□ 1.28
CLCN6-205ENST00000376492 CARMIL2Q6F5E8 1435 aa23.02■■□□□ 1.28
CLCN6-205ENST00000376492 ASXL2Q76L83 1435 aa23■■□□□ 1.27
CLCN6-205ENST00000376492 IQGAP2Q13576 1575 aa22.99■■□□□ 1.27
CLCN6-205ENST00000376492 PLB1Q6P1J6 1458 aa22.95■■□□□ 1.26
CLCN6-205ENST00000376492 PPRC1Q5VV67 1664 aaKnown RBP22.94■■□□□ 1.26
CLCN6-205ENST00000376492 DISP1Q96F81 1524 aa22.94■■□□□ 1.26
CLCN6-205ENST00000376492 UHRF1BP1LA0JNW5 1464 aa22.94■■□□□ 1.26
CLCN6-205ENST00000376492 GLI2P10070 1586 aa22.93■■□□□ 1.26
CLCN6-205ENST00000376492 UACAQ9BZF9 1416 aa22.92■■□□□ 1.26
CLCN6-205ENST00000376492 EPRSP07814 1512 aaKnown RBP22.86■■□□□ 1.25
CLCN6-205ENST00000376492 KDM5BQ9UGL1 1544 aa22.86■■□□□ 1.25
CLCN6-205ENST00000376492 COL17A1Q9UMD9 1497 aaPredicted RBP22.85■■□□□ 1.25
CLCN6-205ENST00000376492 UGGT2Q9NYU1 1516 aa22.84■■□□□ 1.25
CLCN6-205ENST00000376492 ADGRL1O94910 1474 aa22.84■■□□□ 1.25
CLCN6-205ENST00000376492 RAPGEF2Q9Y4G8 1499 aa22.83■■□□□ 1.25
CLCN6-205ENST00000376492 MAP3K4Q9Y6R4 1608 aa22.81■■□□□ 1.24
CLCN6-205ENST00000376492 KIAA0556O60303 1618 aa22.8■■□□□ 1.24
CLCN6-205ENST00000376492 ZCCHC11Q5TAX3 1644 aaKnown RBP22.8■■□□□ 1.24
CLCN6-205ENST00000376492 TEX14Q8IWB6 1497 aa22.75■■□□□ 1.23
CLCN6-205ENST00000376492 WDR7Q9Y4E6 1490 aa22.72■■□□□ 1.23
CLCN6-205ENST00000376492 ILDR1Q86SU0 546 aaPredicted RBP22.7■■□□□ 1.22
CLCN6-205ENST00000376492 ABCA8O94911 1581 aa22.62■■□□□ 1.21
CLCN6-205ENST00000376492 HECW2Q9P2P5 1572 aa22.62■■□□□ 1.21
CLCN6-205ENST00000376492 CTTNBP2Q8WZ74 1663 aa22.62■■□□□ 1.21
CLCN6-205ENST00000376492 CD109Q6YHK3 1445 aa22.61■■□□□ 1.21
CLCN6-205ENST00000376492 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
CLCN6-205ENST00000376492 MAGI3Q5TCQ9 1506 aa22.59■■□□□ 1.21
CLCN6-205ENST00000376492 KCNH8Q96L42 1107 aa22.59■■□□□ 1.21
CLCN6-205ENST00000376492 CFAP43Q8NDM7 1665 aa22.55■■□□□ 1.2
CLCN6-205ENST00000376492 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
CLCN6-205ENST00000376492 ARID3CA6NKF2 412 aa22.51■■□□□ 1.19
CLCN6-205ENST00000376492 KIF21BO75037 1637 aa22.46■■□□□ 1.19
CLCN6-205ENST00000376492 P3H3Q8IVL6 736 aa22.44■■□□□ 1.18
CLCN6-205ENST00000376492 ATP10BO94823 1461 aa22.43■■□□□ 1.18
CLCN6-205ENST00000376492 ARAP3Q8WWN8 1544 aa22.42■■□□□ 1.18
CLCN6-205ENST00000376492 ABCA9Q8IUA7 1624 aa22.35■■□□□ 1.17
CLCN6-205ENST00000376492 RAPGEF3O95398 923 aa22.33■■□□□ 1.17
CLCN6-205ENST00000376492 SAMD9Q5K651 1589 aa22.33■■□□□ 1.16
CLCN6-205ENST00000376492 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
CLCN6-205ENST00000376492 RAPGEF6Q8TEU7 1601 aa22.3■■□□□ 1.16
CLCN6-205ENST00000376492 PTPRMP28827 1452 aa22.28■■□□□ 1.16
CLCN6-205ENST00000376492 PHLDB1Q86UU1 1377 aa22.28■■□□□ 1.16
CLCN6-205ENST00000376492 ADAMTSL3P82987 1691 aa22.27■■□□□ 1.16
CLCN6-205ENST00000376492 FRMPD1Q5SYB0 1578 aa22.27■■□□□ 1.16
CLCN6-205ENST00000376492 NEO1Q92859 1461 aa22.27■■□□□ 1.16
CLCN6-205ENST00000376492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
CLCN6-205ENST00000376492 HNRNPUL2Q1KMD3 747 aaKnown RBP22.26■■□□□ 1.15
CLCN6-205ENST00000376492 NUP153P49790 1475 aaKnown RBP22.26■■□□□ 1.15
CLCN6-205ENST00000376492 CSRNP3Q8WYN3 585 aa22.24■■□□□ 1.15
CLCN6-205ENST00000376492 RANGAP1P46060 587 aaPredicted RBP22.22■■□□□ 1.15
CLCN6-205ENST00000376492 FHOD3Q2V2M9 1422 aa22.22■■□□□ 1.15
CLCN6-205ENST00000376492 ARID4BQ4LE39 1312 aaPredicted RBP22.19■■□□□ 1.14
CLCN6-205ENST00000376492 MADDQ8WXG6 1647 aa22.19■■□□□ 1.14
CLCN6-205ENST00000376492 BCORL1Q5H9F3 1711 aa22.19■■□□□ 1.14
CLCN6-205ENST00000376492 FBXO41Q8TF61 875 aa22.16■■□□□ 1.14
CLCN6-205ENST00000376492 ARHGEF40Q8TER5 1519 aa22.16■■□□□ 1.14
CLCN6-205ENST00000376492 PCF11O94913 1555 aaKnown RBP22.13■■□□□ 1.13
CLCN6-205ENST00000376492 DENND4BO75064 1496 aaPredicted RBP22.13■■□□□ 1.13
CLCN6-205ENST00000376492 LMTK3Q96Q04 1460 aa22.13■■□□□ 1.13
CLCN6-205ENST00000376492 AKNAQ7Z591 1439 aa22.11■■□□□ 1.13
CLCN6-205ENST00000376492 FANCAO15360 1455 aa22.1■■□□□ 1.13
CLCN6-205ENST00000376492 RICTORQ6R327 1708 aa22.09■■□□□ 1.13
CLCN6-205ENST00000376492 PLEKHD1A6NEE1 506 aa22.09■■□□□ 1.13
CLCN6-205ENST00000376492 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.09■■□□□ 1.13
CLCN6-205ENST00000376492 TTC37Q6PGP7 1564 aa22.08■■□□□ 1.13
CLCN6-205ENST00000376492 RIMS1Q86UR5 1692 aaKnown RBP22.08■■□□□ 1.13
CLCN6-205ENST00000376492 EEA1Q15075 1411 aa22.07■■□□□ 1.12
CLCN6-205ENST00000376492 YEATS2Q9ULM3 1422 aa22.05■■□□□ 1.12
CLCN6-205ENST00000376492 CFAP74Q9C0B2 1584 aa22.04■■□□□ 1.12
CLCN6-205ENST00000376492 ZMYM4Q5VZL5 1548 aa22.04■■□□□ 1.12
CLCN6-205ENST00000376492 SIGLEC1Q9BZZ2 1709 aa22.03■■□□□ 1.12
CLCN6-205ENST00000376492 PLPPR3Q6T4P5 718 aa22.03■■□□□ 1.12
CLCN6-205ENST00000376492 EFCAB5A4FU69 1503 aa22.02■■□□□ 1.12
CLCN6-205ENST00000376492 CDK13Q14004 1512 aaKnown RBP22.02■■□□□ 1.12
CLCN6-205ENST00000376492 ZFYVE16Q7Z3T8 1539 aa22.02■■□□□ 1.12
CLCN6-205ENST00000376492 HSPA2P54652 639 aa22.01■■□□□ 1.11
CLCN6-205ENST00000376492 POGZQ7Z3K3 1410 aa21.98■■□□□ 1.11
CLCN6-205ENST00000376492 HECW1Q76N89 1606 aa21.97■■□□□ 1.11
CLCN6-205ENST00000376492 MLECQ14165 292 aa21.95■■□□□ 1.1
CLCN6-205ENST00000376492 MAGI2Q86UL8 1455 aa21.95■■□□□ 1.1
CLCN6-205ENST00000376492 SCAPERQ9BY12 1400 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms