RNA–Protein interactions for RNA: ENST00000376251.5

CACNA1F-202, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 5,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-202ENST00000376251 C14orf37Q86TY3 774 aa18■□□□□ 0.47
CACNA1F-202ENST00000376251 CADPSQ9ULU8 1353 aa17.99■□□□□ 0.47
CACNA1F-202ENST00000376251 TDRD9Q8NDG6 1382 aaKnown RBP17.99■□□□□ 0.47
CACNA1F-202ENST00000376251 ZBTB47Q9UFB7 747 aaPredicted RBP17.97■□□□□ 0.47
CACNA1F-202ENST00000376251 CANXP27824 592 aaKnown RBP17.96■□□□□ 0.47
CACNA1F-202ENST00000376251 ZNF316A6NFI3 1004 aaPredicted RBP17.95■□□□□ 0.46
CACNA1F-202ENST00000376251 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
CACNA1F-202ENST00000376251 WIZO95785 1651 aa17.93■□□□□ 0.46
CACNA1F-202ENST00000376251 CARMIL2Q6F5E8 1435 aa17.92■□□□□ 0.46
CACNA1F-202ENST00000376251 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
CACNA1F-202ENST00000376251 TNIKQ9UKE5 1360 aa17.9■□□□□ 0.46
CACNA1F-202ENST00000376251 PLEKHG5O94827 1062 aa17.89■□□□□ 0.46
CACNA1F-202ENST00000376251 BCL11AQ9H165 835 aa17.89■□□□□ 0.45
CACNA1F-202ENST00000376251 MLECQ14165 292 aa17.88■□□□□ 0.45
CACNA1F-202ENST00000376251 CCNB3Q8WWL7 1395 aa17.88■□□□□ 0.45
CACNA1F-202ENST00000376251 RGL3Q3MIN7 710 aa17.86■□□□□ 0.45
CACNA1F-202ENST00000376251 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
CACNA1F-202ENST00000376251 SMARCA4P51532 1647 aa17.85■□□□□ 0.45
CACNA1F-202ENST00000376251 ZBTB7CA1YPR0 619 aa17.85■□□□□ 0.45
CACNA1F-202ENST00000376251 FHAD1B1AJZ9 1412 aa17.84■□□□□ 0.45
CACNA1F-202ENST00000376251 MYT1Q01538 1121 aa17.83■□□□□ 0.44
CACNA1F-202ENST00000376251 A0A0G2JS52 829 aa17.81■□□□□ 0.44
CACNA1F-202ENST00000376251 ACIN1Q9UKV3 1341 aaKnown RBP17.79■□□□□ 0.44
CACNA1F-202ENST00000376251 FANCD2Q9BXW9 1451 aa17.79■□□□□ 0.44
CACNA1F-202ENST00000376251 HAP1P54257 671 aaPredicted RBP17.79■□□□□ 0.44
CACNA1F-202ENST00000376251 TMC1Q8TDI8 760 aa17.73■□□□□ 0.43
CACNA1F-202ENST00000376251 KANK1Q14678 1352 aa17.73■□□□□ 0.43
CACNA1F-202ENST00000376251 OSCARQ8IYS5 282 aa17.72■□□□□ 0.43
CACNA1F-202ENST00000376251 DDX10Q13206 875 aaKnown RBP17.71■□□□□ 0.43
CACNA1F-202ENST00000376251 GGT6Q6P531 493 aa17.69■□□□□ 0.42
CACNA1F-202ENST00000376251 JPH4Q96JJ6 628 aa17.69■□□□□ 0.42
CACNA1F-202ENST00000376251 CYB5RLQ6IPT4 315 aa17.68■□□□□ 0.42
CACNA1F-202ENST00000376251 WDR43Q15061 677 aaKnown RBP eCLIP17.66■□□□□ 0.42
CACNA1F-202ENST00000376251 POGKQ9P215 609 aa17.66■□□□□ 0.42
CACNA1F-202ENST00000376251 EFCAB2Q5VUJ9 269 aa17.66■□□□□ 0.42
CACNA1F-202ENST00000376251 HDGFP51858 240 aaKnown RBP17.65■□□□□ 0.42
CACNA1F-202ENST00000376251 EIF4G2P78344 907 aaKnown RBP eCLIP17.65■□□□□ 0.42
CACNA1F-202ENST00000376251 FAM9BQ8IZU0 186 aa17.64■□□□□ 0.42
CACNA1F-202ENST00000376251 SALL2Q9Y467 1007 aaPredicted RBP17.64■□□□□ 0.41
CACNA1F-202ENST00000376251 LMOD2Q6P5Q4 547 aa17.64■□□□□ 0.41
CACNA1F-202ENST00000376251 HIRIP3Q9BW71 556 aaPredicted RBP17.62■□□□□ 0.41
CACNA1F-202ENST00000376251 RAPGEF2Q9Y4G8 1499 aa17.61■□□□□ 0.41
CACNA1F-202ENST00000376251 FMN1Q68DA7 1419 aa17.61■□□□□ 0.41
CACNA1F-202ENST00000376251 NPM2Q86SE8 214 aaKnown RBP17.6■□□□□ 0.41
CACNA1F-202ENST00000376251 CARD11Q9BXL7 1154 aa17.57■□□□□ 0.4
CACNA1F-202ENST00000376251 CDCA8Q53HL2 280 aa17.57■□□□□ 0.4
CACNA1F-202ENST00000376251 ARHGAP35Q9NRY4 1499 aa17.56■□□□□ 0.4
CACNA1F-202ENST00000376251 NCAPD3P42695 1498 aa17.55■□□□□ 0.4
CACNA1F-202ENST00000376251 HNRNPUQ00839 825 aaKnown RBP eCLIP17.53■□□□□ 0.4
CACNA1F-202ENST00000376251 PPM1GO15355 546 aaPredicted RBP17.53■□□□□ 0.4
CACNA1F-202ENST00000376251 FHOD3Q2V2M9 1422 aa17.51■□□□□ 0.39
CACNA1F-202ENST00000376251 PTPRGP23470 1445 aa17.5■□□□□ 0.39
CACNA1F-202ENST00000376251 MRS2Q9HD23 443 aa17.5■□□□□ 0.39
CACNA1F-202ENST00000376251 CC2D2AQ9P2K1 1620 aa17.49■□□□□ 0.39
CACNA1F-202ENST00000376251 VPS8Q8N3P4 1428 aa17.48■□□□□ 0.39
CACNA1F-202ENST00000376251 KNSTRNQ9Y448 316 aa17.48■□□□□ 0.39
CACNA1F-202ENST00000376251 GAPVD1Q14C86 1478 aa17.48■□□□□ 0.39
CACNA1F-202ENST00000376251 HNRNPMP52272 730 aaKnown RBP eCLIP17.48■□□□□ 0.39
CACNA1F-202ENST00000376251 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
CACNA1F-202ENST00000376251 DCAF11Q8TEB1 546 aa17.47■□□□□ 0.39
CACNA1F-202ENST00000376251 KIF3BO15066 747 aa17.46■□□□□ 0.39
CACNA1F-202ENST00000376251 CFAP53Q96M91 514 aa17.46■□□□□ 0.39
CACNA1F-202ENST00000376251 RAD54L2Q9Y4B4 1467 aa17.46■□□□□ 0.39
CACNA1F-202ENST00000376251 SPAG9O60271 1321 aaKnown RBP17.45■□□□□ 0.38
CACNA1F-202ENST00000376251 KANK4Q5T7N3 995 aaPredicted RBP17.45■□□□□ 0.38
CACNA1F-202ENST00000376251 SIN3AQ96ST3 1273 aa17.44■□□□□ 0.38
CACNA1F-202ENST00000376251 SAFB2Q14151 953 aaKnown RBP eCLIP17.42■□□□□ 0.38
CACNA1F-202ENST00000376251 AQRO60306 1485 aaKnown RBP eCLIP17.41■□□□□ 0.38
CACNA1F-202ENST00000376251 ANKRD30AQ9BXX3 1397 aa17.41■□□□□ 0.38
CACNA1F-202ENST00000376251 PKD2Q13563 968 aa17.41■□□□□ 0.38
CACNA1F-202ENST00000376251 STK26Q9P289 416 aa17.41■□□□□ 0.38
CACNA1F-202ENST00000376251 CCDC18Q5T9S5 1454 aa17.41■□□□□ 0.38
CACNA1F-202ENST00000376251 ARXQ96QS3 562 aa17.4■□□□□ 0.38
CACNA1F-202ENST00000376251 SRPK2P78362 688 aaKnown RBP17.39■□□□□ 0.37
CACNA1F-202ENST00000376251 WASHC2CQ9Y4E1 1318 aa17.39■□□□□ 0.37
CACNA1F-202ENST00000376251 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.38■□□□□ 0.37
CACNA1F-202ENST00000376251 FAM69CQ0P6D2 419 aa17.38■□□□□ 0.37
CACNA1F-202ENST00000376251 RSPH4AQ5TD94 716 aa17.37■□□□□ 0.37
CACNA1F-202ENST00000376251 NESP48681 1621 aa17.37■□□□□ 0.37
CACNA1F-202ENST00000376251 NUP155O75694 1391 aa17.37■□□□□ 0.37
CACNA1F-202ENST00000376251 EID1Q9Y6B2 187 aa17.36■□□□□ 0.37
CACNA1F-202ENST00000376251 TNNT2P45379 298 aaPredicted RBP17.35■□□□□ 0.37
CACNA1F-202ENST00000376251 RTL5Q5HYW3 569 aaPredicted RBP17.35■□□□□ 0.37
CACNA1F-202ENST00000376251 MRC2Q9UBG0 1479 aa17.34■□□□□ 0.37
CACNA1F-202ENST00000376251 GTF3C3Q9Y5Q9 886 aa17.34■□□□□ 0.37
CACNA1F-202ENST00000376251 AEBP2Q6ZN18 517 aaPredicted RBP17.34■□□□□ 0.37
CACNA1F-202ENST00000376251 SOX12O15370 315 aa17.33■□□□□ 0.37
CACNA1F-202ENST00000376251 FOXD1Q16676 465 aa17.33■□□□□ 0.36
CACNA1F-202ENST00000376251 SETD5Q9C0A6 1442 aa17.33■□□□□ 0.36
CACNA1F-202ENST00000376251 TMF1P82094 1093 aa17.32■□□□□ 0.36
CACNA1F-202ENST00000376251 NUDCQ9Y266 331 aa17.31■□□□□ 0.36
CACNA1F-202ENST00000376251 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
CACNA1F-202ENST00000376251 MAPK8IP3Q9UPT6 1336 aa17.29■□□□□ 0.36
CACNA1F-202ENST00000376251 IGF1RP08069 1367 aa17.28■□□□□ 0.36
CACNA1F-202ENST00000376251 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.36
CACNA1F-202ENST00000376251 MYH16Q9H6N6 1097 aa17.27■□□□□ 0.36
CACNA1F-202ENST00000376251 GRIN2BQ13224 1484 aa17.27■□□□□ 0.35
CACNA1F-202ENST00000376251 NUTM2DQ5VT03 806 aaPredicted RBP17.26■□□□□ 0.35
CACNA1F-202ENST00000376251 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
CACNA1F-202ENST00000376251 CC2D1BQ5T0F9 858 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms