RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 VPS8Q8N3P4 1428 aa11.63□□□□□ -0.55
SHROOM4-202ENST00000376020 KIF27Q86VH2 1401 aa11.62□□□□□ -0.55
SHROOM4-202ENST00000376020 MRS2Q9HD23 443 aa11.61□□□□□ -0.55
SHROOM4-202ENST00000376020 NOP58Q9Y2X3 529 aaKnown RBP11.61□□□□□ -0.55
SHROOM4-202ENST00000376020 CDCA8Q53HL2 280 aa11.61□□□□□ -0.55
SHROOM4-202ENST00000376020 MTUS2Q5JR59 1369 aa11.6□□□□□ -0.55
SHROOM4-202ENST00000376020 DDX10Q13206 875 aaKnown RBP11.59□□□□□ -0.55
SHROOM4-202ENST00000376020 L1TD1Q5T7N2 865 aaKnown RBP11.59□□□□□ -0.55
SHROOM4-202ENST00000376020 SUPT16HQ9Y5B9 1047 aaKnown RBP11.57□□□□□ -0.56
SHROOM4-202ENST00000376020 CCNB3Q8WWL7 1395 aa11.56□□□□□ -0.56
SHROOM4-202ENST00000376020 MS4A1P11836 297 aa11.56□□□□□ -0.56
SHROOM4-202ENST00000376020 BCL11AQ9H165 835 aa11.55□□□□□ -0.56
SHROOM4-202ENST00000376020 NPM2Q86SE8 214 aaKnown RBP11.53□□□□□ -0.56
SHROOM4-202ENST00000376020 MYH16Q9H6N6 1097 aa11.53□□□□□ -0.56
SHROOM4-202ENST00000376020 WDR43Q15061 677 aaKnown RBP eCLIP11.52□□□□□ -0.57
SHROOM4-202ENST00000376020 NBR1Q14596 966 aa11.51□□□□□ -0.57
SHROOM4-202ENST00000376020 PHLDB1Q86UU1 1377 aa11.51□□□□□ -0.57
SHROOM4-202ENST00000376020 SLC4A1APQ9BWU0 796 aaKnown RBP11.5□□□□□ -0.57
SHROOM4-202ENST00000376020 SMARCA2P51531 1590 aa11.5□□□□□ -0.57
SHROOM4-202ENST00000376020 ZNF326Q5BKZ1 582 aaKnown RBP11.5□□□□□ -0.57
SHROOM4-202ENST00000376020 ROCK2O75116 1388 aaKnown RBP11.49□□□□□ -0.57
SHROOM4-202ENST00000376020 FAM9BQ8IZU0 186 aa11.48□□□□□ -0.57
SHROOM4-202ENST00000376020 TOP2AP11388 1531 aaKnown RBP11.46□□□□□ -0.57
SHROOM4-202ENST00000376020 CASC1Q6TDU7 716 aa11.45□□□□□ -0.58
SHROOM4-202ENST00000376020 SETD5Q9C0A6 1442 aa11.45□□□□□ -0.58
SHROOM4-202ENST00000376020 TCERG1O14776 1098 aaKnown RBP11.45□□□□□ -0.58
SHROOM4-202ENST00000376020 FANCIQ9NVI1 1328 aa11.45□□□□□ -0.58
SHROOM4-202ENST00000376020 ARHGAP35Q9NRY4 1499 aa11.45□□□□□ -0.58
SHROOM4-202ENST00000376020 NRDCO43847 1150 aa11.44□□□□□ -0.58
SHROOM4-202ENST00000376020 RSPH6AQ9H0K4 717 aa11.44□□□□□ -0.58
SHROOM4-202ENST00000376020 CHAF1AQ13111 956 aaPredicted RBP11.43□□□□□ -0.58
SHROOM4-202ENST00000376020 RBM19Q9Y4C8 960 aaKnown RBP11.43□□□□□ -0.58
SHROOM4-202ENST00000376020 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
SHROOM4-202ENST00000376020 FMN1Q68DA7 1419 aa11.42□□□□□ -0.58
SHROOM4-202ENST00000376020 TSPY4P0CV99 314 aa11.4□□□□□ -0.58
SHROOM4-202ENST00000376020 TSPY10P0CW01 314 aa11.4□□□□□ -0.58
SHROOM4-202ENST00000376020 PDE3BQ13370 1112 aa11.39□□□□□ -0.59
SHROOM4-202ENST00000376020 GOLGA6L6A8MZA4 724 aa11.39□□□□□ -0.59
SHROOM4-202ENST00000376020 CNGB1Q14028 1251 aaPredicted RBP11.38□□□□□ -0.59
SHROOM4-202ENST00000376020 DEKP35659 375 aaKnown RBP11.37□□□□□ -0.59
SHROOM4-202ENST00000376020 NGEFQ8N5V2 710 aa11.37□□□□□ -0.59
SHROOM4-202ENST00000376020 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
SHROOM4-202ENST00000376020 KIF21BO75037 1637 aa11.37□□□□□ -0.59
SHROOM4-202ENST00000376020 PNNQ9H307 717 aaKnown RBP11.36□□□□□ -0.59
SHROOM4-202ENST00000376020 IPO9Q96P70 1041 aaKnown RBP11.35□□□□□ -0.59
SHROOM4-202ENST00000376020 RALBP1Q15311 655 aa11.35□□□□□ -0.59
SHROOM4-202ENST00000376020 KNSTRNQ9Y448 316 aa11.35□□□□□ -0.59
SHROOM4-202ENST00000376020 CDK11BP21127 795 aaKnown RBP11.34□□□□□ -0.59
SHROOM4-202ENST00000376020 KTN1Q86UP2 1357 aaKnown RBP11.34□□□□□ -0.59
SHROOM4-202ENST00000376020 MSNP26038 577 aaKnown RBP11.33□□□□□ -0.6
SHROOM4-202ENST00000376020 AAMPQ13685 434 aa11.33□□□□□ -0.6
SHROOM4-202ENST00000376020 GBP4Q96PP9 640 aa11.33□□□□□ -0.6
SHROOM4-202ENST00000376020 NAP1L5Q96NT1 182 aaPredicted RBP11.31□□□□□ -0.6
SHROOM4-202ENST00000376020 CUX1P39880 1505 aa11.3□□□□□ -0.6
SHROOM4-202ENST00000376020 ZRSR1Q15695 479 aaKnown RBP11.3□□□□□ -0.6
SHROOM4-202ENST00000376020 SYAP1Q96A49 352 aaPredicted RBP11.3□□□□□ -0.6
SHROOM4-202ENST00000376020 ZBED9Q6R2W3 1325 aa11.3□□□□□ -0.6
SHROOM4-202ENST00000376020 MTERF4Q7Z6M4 381 aaKnown RBP11.3□□□□□ -0.6
SHROOM4-202ENST00000376020 PTMAP06454 111 aaKnown RBP11.3□□□□□ -0.6
SHROOM4-202ENST00000376020 ERICH3Q5RHP9 1530 aa11.29□□□□□ -0.6
SHROOM4-202ENST00000376020 HSCBQ8IWL3 235 aa11.29□□□□□ -0.6
SHROOM4-202ENST00000376020 FTSJ3Q8IY81 847 aaKnown RBP11.29□□□□□ -0.6
SHROOM4-202ENST00000376020 SMARCA4P51532 1647 aa11.28□□□□□ -0.6
SHROOM4-202ENST00000376020 CHMP4AQ9BY43 222 aa11.28□□□□□ -0.6
SHROOM4-202ENST00000376020 TSHZ2Q9NRE2 1034 aa11.27□□□□□ -0.6
SHROOM4-202ENST00000376020 MAPK8IP3Q9UPT6 1336 aa11.26□□□□□ -0.61
SHROOM4-202ENST00000376020 ISY1Q9ULR0 285 aaKnown RBP11.25□□□□□ -0.61
SHROOM4-202ENST00000376020 EIF3AQ14152 1382 aaKnown RBP11.25□□□□□ -0.61
SHROOM4-202ENST00000376020 DNTTIP2Q5QJE6 756 aaKnown RBP11.25□□□□□ -0.61
SHROOM4-202ENST00000376020 PHF14O94880 888 aa11.25□□□□□ -0.61
SHROOM4-202ENST00000376020 WIZO95785 1651 aa11.25□□□□□ -0.61
SHROOM4-202ENST00000376020 DDX11L8A8MPP1 907 aa11.24□□□□□ -0.61
SHROOM4-202ENST00000376020 KIAA2012Q0VF49 1180 aa11.24□□□□□ -0.61
SHROOM4-202ENST00000376020 MAP7D2Q96T17 732 aa11.24□□□□□ -0.61
SHROOM4-202ENST00000376020 SKOR2Q2VWA4 1001 aaPredicted RBP11.23□□□□□ -0.61
SHROOM4-202ENST00000376020 NUDCQ9Y266 331 aa11.23□□□□□ -0.61
SHROOM4-202ENST00000376020 RAB3GAP2Q9H2M9 1393 aa11.22□□□□□ -0.61
SHROOM4-202ENST00000376020 CALD1Q05682 793 aaKnown RBP11.22□□□□□ -0.61
SHROOM4-202ENST00000376020 CCDC18Q5T9S5 1454 aa11.22□□□□□ -0.61
SHROOM4-202ENST00000376020 MCCP23508 829 aa11.22□□□□□ -0.61
SHROOM4-202ENST00000376020 CARD11Q9BXL7 1154 aa11.21□□□□□ -0.62
SHROOM4-202ENST00000376020 IPO8O15397 1037 aaKnown RBP11.21□□□□□ -0.62
SHROOM4-202ENST00000376020 CCDC88BA6NC98 1476 aa11.2□□□□□ -0.62
SHROOM4-202ENST00000376020 MROH2BQ7Z745 1585 aa11.2□□□□□ -0.62
SHROOM4-202ENST00000376020 PABPN1Q86U42 306 aaKnown RBP eCLIP11.2□□□□□ -0.62
SHROOM4-202ENST00000376020 ABCC8Q09428 1581 aa11.19□□□□□ -0.62
SHROOM4-202ENST00000376020 NLRP13Q86W25 1043 aa11.19□□□□□ -0.62
SHROOM4-202ENST00000376020 KIF15Q9NS87 1388 aa11.18□□□□□ -0.62
SHROOM4-202ENST00000376020 ZNF777Q9ULD5 760 aaPredicted RBP11.18□□□□□ -0.62
SHROOM4-202ENST00000376020 GOLGA6L3A6NEY3 463 aa11.18□□□□□ -0.62
SHROOM4-202ENST00000376020 TMF1P82094 1093 aa11.18□□□□□ -0.62
SHROOM4-202ENST00000376020 HTATSF1O43719 755 aaKnown RBP11.18□□□□□ -0.62
SHROOM4-202ENST00000376020 HSP90AB1P08238 724 aaKnown RBP11.18□□□□□ -0.62
SHROOM4-202ENST00000376020 PMFBP1Q8TBY8 1022 aa11.18□□□□□ -0.62
SHROOM4-202ENST00000376020 RCAN3Q9UKA8 241 aa11.18□□□□□ -0.62
SHROOM4-202ENST00000376020 CSPP1Q1MSJ5 1256 aa11.17□□□□□ -0.62
SHROOM4-202ENST00000376020 HSP90AA2PQ14568 343 aaPredicted RBP11.17□□□□□ -0.62
SHROOM4-202ENST00000376020 GSE1Q14687 1217 aa11.17□□□□□ -0.62
SHROOM4-202ENST00000376020 RWDD1Q9H446 243 aaPredicted RBP11.17□□□□□ -0.62
SHROOM4-202ENST00000376020 P3H3Q8IVL6 736 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms