RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 JPH4Q96JJ6 628 aa28.69■■■□□ 2.18
CLIC1-208ENST00000375784 FAM69CQ0P6D2 419 aa28.61■■■□□ 2.17
CLIC1-208ENST00000375784 ABCC10Q5T3U5 1492 aa28.59■■■□□ 2.17
CLIC1-208ENST00000375784 NPM1P06748 294 aaKnown RBP eCLIP28.57■■■□□ 2.16
CLIC1-208ENST00000375784 MAPKBP1O60336 1514 aa28.51■■■□□ 2.15
CLIC1-208ENST00000375784 RUSC2Q8N2Y8 1516 aa28.51■■■□□ 2.15
CLIC1-208ENST00000375784 DIP2BQ9P265 1576 aa28.45■■■□□ 2.15
CLIC1-208ENST00000375784 ADCY10Q96PN6 1610 aa28.43■■■□□ 2.14
CLIC1-208ENST00000375784 KDM4FA0A1W2PPD8 638 aa28.38■■■□□ 2.13
CLIC1-208ENST00000375784 KIAA0586Q9BVV6 1533 aa28.36■■■□□ 2.13
CLIC1-208ENST00000375784 KDM6BO15054 1643 aa28.34■■■□□ 2.13
CLIC1-208ENST00000375784 KIF27Q86VH2 1401 aa28.31■■■□□ 2.12
CLIC1-208ENST00000375784 IGF1RP08069 1367 aa28.3■■■□□ 2.12
CLIC1-208ENST00000375784 PTPRGP23470 1445 aa28.22■■■□□ 2.11
CLIC1-208ENST00000375784 TSPOAP1O95153 1857 aa28.21■■■□□ 2.11
CLIC1-208ENST00000375784 CUL7Q14999 1698 aa28.18■■■□□ 2.1
CLIC1-208ENST00000375784 TTBK1Q5TCY1 1321 aaPredicted RBP28.14■■■□□ 2.09
CLIC1-208ENST00000375784 TNIKQ9UKE5 1360 aa28.12■■■□□ 2.09
CLIC1-208ENST00000375784 ABCC2Q92887 1545 aa28.12■■■□□ 2.09
CLIC1-208ENST00000375784 CARMIL2Q6F5E8 1435 aa28.1■■■□□ 2.09
CLIC1-208ENST00000375784 CARMIL1Q5VZK9 1371 aa28.09■■■□□ 2.09
CLIC1-208ENST00000375784 ASXL2Q76L83 1435 aa28.09■■■□□ 2.09
CLIC1-208ENST00000375784 PLB1Q6P1J6 1458 aa28.08■■■□□ 2.09
CLIC1-208ENST00000375784 GLI2P10070 1586 aa28.05■■■□□ 2.08
CLIC1-208ENST00000375784 ILDR1Q86SU0 546 aaPredicted RBP28.05■■■□□ 2.08
CLIC1-208ENST00000375784 UHRF1BP1LA0JNW5 1464 aa28.01■■■□□ 2.07
CLIC1-208ENST00000375784 PPRC1Q5VV67 1664 aaKnown RBP28■■■□□ 2.07
CLIC1-208ENST00000375784 UACAQ9BZF9 1416 aa27.98■■■□□ 2.07
CLIC1-208ENST00000375784 ADGRL1O94910 1474 aa27.97■■■□□ 2.07
CLIC1-208ENST00000375784 IQGAP2Q13576 1575 aa27.97■■■□□ 2.07
CLIC1-208ENST00000375784 COL17A1Q9UMD9 1497 aaPredicted RBP27.94■■■□□ 2.06
CLIC1-208ENST00000375784 DISP1Q96F81 1524 aa27.92■■■□□ 2.06
CLIC1-208ENST00000375784 EPRSP07814 1512 aaKnown RBP27.91■■■□□ 2.06
CLIC1-208ENST00000375784 KDM5BQ9UGL1 1544 aa27.89■■■□□ 2.06
CLIC1-208ENST00000375784 TEX14Q8IWB6 1497 aa27.85■■■□□ 2.05
CLIC1-208ENST00000375784 MAP3K4Q9Y6R4 1608 aa27.85■■■□□ 2.05
CLIC1-208ENST00000375784 RAPGEF2Q9Y4G8 1499 aa27.84■■■□□ 2.05
CLIC1-208ENST00000375784 SENP3Q9H4L4 574 aaPredicted RBP27.8■■■□□ 2.04
CLIC1-208ENST00000375784 UGGT2Q9NYU1 1516 aa27.8■■■□□ 2.04
CLIC1-208ENST00000375784 ZCCHC11Q5TAX3 1644 aaKnown RBP27.78■■■□□ 2.04
CLIC1-208ENST00000375784 HECW2Q9P2P5 1572 aa27.74■■■□□ 2.03
CLIC1-208ENST00000375784 CSRNP3Q8WYN3 585 aa27.74■■■□□ 2.03
CLIC1-208ENST00000375784 KIAA0556O60303 1618 aa27.72■■■□□ 2.03
CLIC1-208ENST00000375784 WDR7Q9Y4E6 1490 aa27.71■■■□□ 2.03
CLIC1-208ENST00000375784 EEA1Q15075 1411 aa27.7■■■□□ 2.03
CLIC1-208ENST00000375784 PRXQ9BXM0 1461 aa27.69■■■□□ 2.02
CLIC1-208ENST00000375784 CD109Q6YHK3 1445 aa27.62■■■□□ 2.01
CLIC1-208ENST00000375784 FAM9AQ8IZU1 332 aaPredicted RBP27.62■■■□□ 2.01
CLIC1-208ENST00000375784 PHF23Q9BUL5 403 aaPredicted RBP27.62■■■□□ 2.01
CLIC1-208ENST00000375784 MAGI3Q5TCQ9 1506 aa27.62■■■□□ 2.01
CLIC1-208ENST00000375784 KCNH8Q96L42 1107 aa27.59■■■□□ 2.01
CLIC1-208ENST00000375784 CFAP43Q8NDM7 1665 aa27.54■■■□□ 2
CLIC1-208ENST00000375784 GOLGA3Q08378 1498 aa27.53■■■□□ 2
CLIC1-208ENST00000375784 ABCA8O94911 1581 aa27.52■■■□□ 2
CLIC1-208ENST00000375784 CTTNBP2Q8WZ74 1663 aa27.45■■□□□ 1.98
CLIC1-208ENST00000375784 ARAP3Q8WWN8 1544 aa27.41■■□□□ 1.98
CLIC1-208ENST00000375784 KIF21BO75037 1637 aa27.41■■□□□ 1.98
CLIC1-208ENST00000375784 FBXO41Q8TF61 875 aa27.36■■□□□ 1.97
CLIC1-208ENST00000375784 ARID3CA6NKF2 412 aa27.33■■□□□ 1.97
CLIC1-208ENST00000375784 PHLDB1Q86UU1 1377 aa27.33■■□□□ 1.97
CLIC1-208ENST00000375784 ATP10BO94823 1461 aa27.32■■□□□ 1.96
CLIC1-208ENST00000375784 PTPRMP28827 1452 aa27.3■■□□□ 1.96
CLIC1-208ENST00000375784 RAPGEF3O95398 923 aa27.27■■□□□ 1.96
CLIC1-208ENST00000375784 UBTFP17480 764 aaKnown RBP27.27■■□□□ 1.96
CLIC1-208ENST00000375784 P3H3Q8IVL6 736 aa27.27■■□□□ 1.96
CLIC1-208ENST00000375784 ADAMTSL3P82987 1691 aa27.25■■□□□ 1.95
CLIC1-208ENST00000375784 EHMT2Q96KQ7 1210 aa27.25■■□□□ 1.95
CLIC1-208ENST00000375784 ABCA9Q8IUA7 1624 aa27.25■■□□□ 1.95
CLIC1-208ENST00000375784 RANGAP1P46060 587 aaPredicted RBP27.24■■□□□ 1.95
CLIC1-208ENST00000375784 NEO1Q92859 1461 aa27.21■■□□□ 1.95
CLIC1-208ENST00000375784 ARID4BQ4LE39 1312 aaPredicted RBP27.16■■□□□ 1.94
CLIC1-208ENST00000375784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.13■■□□□ 1.93
CLIC1-208ENST00000375784 HNRNPUL2Q1KMD3 747 aaKnown RBP27.13■■□□□ 1.93
CLIC1-208ENST00000375784 BCORL1Q5H9F3 1711 aa27.13■■□□□ 1.93
CLIC1-208ENST00000375784 SAMD9Q5K651 1589 aa27.12■■□□□ 1.93
CLIC1-208ENST00000375784 FRMPD1Q5SYB0 1578 aa27.12■■□□□ 1.93
CLIC1-208ENST00000375784 PCF11O94913 1555 aaKnown RBP27.11■■□□□ 1.93
CLIC1-208ENST00000375784 RAPGEF6Q8TEU7 1601 aa27.09■■□□□ 1.93
CLIC1-208ENST00000375784 MADDQ8WXG6 1647 aa27.09■■□□□ 1.93
CLIC1-208ENST00000375784 LMTK3Q96Q04 1460 aa27.09■■□□□ 1.93
CLIC1-208ENST00000375784 NUP153P49790 1475 aaKnown RBP27.04■■□□□ 1.92
CLIC1-208ENST00000375784 EFCAB5A4FU69 1503 aa27.04■■□□□ 1.92
CLIC1-208ENST00000375784 FHOD3Q2V2M9 1422 aa27.03■■□□□ 1.92
CLIC1-208ENST00000375784 DENND4BO75064 1496 aaPredicted RBP27.01■■□□□ 1.91
CLIC1-208ENST00000375784 ARHGEF40Q8TER5 1519 aa27■■□□□ 1.91
CLIC1-208ENST00000375784 PLEKHD1A6NEE1 506 aa26.99■■□□□ 1.91
CLIC1-208ENST00000375784 AKNAQ7Z591 1439 aa26.98■■□□□ 1.91
CLIC1-208ENST00000375784 RIMS1Q86UR5 1692 aaKnown RBP26.96■■□□□ 1.91
CLIC1-208ENST00000375784 HSPA2P54652 639 aa26.95■■□□□ 1.9
CLIC1-208ENST00000375784 FANCAO15360 1455 aa26.93■■□□□ 1.9
CLIC1-208ENST00000375784 RICTORQ6R327 1708 aa26.93■■□□□ 1.9
CLIC1-208ENST00000375784 POGZQ7Z3K3 1410 aa26.92■■□□□ 1.9
CLIC1-208ENST00000375784 PLPPR3Q6T4P5 718 aa26.9■■□□□ 1.9
CLIC1-208ENST00000375784 ARHGAP35Q9NRY4 1499 aa26.89■■□□□ 1.9
CLIC1-208ENST00000375784 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.89■■□□□ 1.892e-10■■□□□ 14
CLIC1-208ENST00000375784 CFAP74Q9C0B2 1584 aa26.88■■□□□ 1.89
CLIC1-208ENST00000375784 ZMYM4Q5VZL5 1548 aa26.87■■□□□ 1.89
CLIC1-208ENST00000375784 FMN1Q68DA7 1419 aa26.86■■□□□ 1.89
CLIC1-208ENST00000375784 YEATS2Q9ULM3 1422 aa26.86■■□□□ 1.89
CLIC1-208ENST00000375784 ZFYVE16Q7Z3T8 1539 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms