RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 SALL2Q9Y467 1007 aaPredicted RBP28.17■■■□□ 2.1
TGFBR1-202ENST00000374994 HIRIP3Q9BW71 556 aaPredicted RBP28.16■■■□□ 2.1
TGFBR1-202ENST00000374994 SUPT16HQ9Y5B9 1047 aaKnown RBP28.16■■■□□ 2.1
TGFBR1-202ENST00000374994 KIF27Q86VH2 1401 aa28.11■■■□□ 2.09
TGFBR1-202ENST00000374994 NACADO15069 1562 aa28.11■■■□□ 2.09
TGFBR1-202ENST00000374994 PPP4R2Q9NY27 417 aa28.11■■■□□ 2.09
TGFBR1-202ENST00000374994 BCL11AQ9H165 835 aa28.09■■■□□ 2.09
TGFBR1-202ENST00000374994 RRP7BPQ9NSQ0 103 aa28.03■■■□□ 2.08
TGFBR1-202ENST00000374994 BECN1Q14457 450 aa28.03■■■□□ 2.08
TGFBR1-202ENST00000374994 PPM1GO15355 546 aaPredicted RBP28.03■■■□□ 2.08
TGFBR1-202ENST00000374994 CCER2I3L3R5 266 aa28.01■■■□□ 2.08
TGFBR1-202ENST00000374994 BAZ1AQ9NRL2 1556 aaPredicted RBP28■■■□□ 2.07
TGFBR1-202ENST00000374994 KDM2AQ9Y2K7 1162 aa28■■■□□ 2.07
TGFBR1-202ENST00000374994 SLC24A1O60721 1099 aa27.98■■■□□ 2.07
TGFBR1-202ENST00000374994 CCNB3Q8WWL7 1395 aa27.98■■■□□ 2.07
TGFBR1-202ENST00000374994 CHGAP10645 457 aaKnown RBP27.93■■■□□ 2.06
TGFBR1-202ENST00000374994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.91■■■□□ 2.06
TGFBR1-202ENST00000374994 BAZ1BQ9UIG0 1483 aaKnown RBP27.9■■■□□ 2.06
TGFBR1-202ENST00000374994 VPS8Q8N3P4 1428 aa27.89■■■□□ 2.06
TGFBR1-202ENST00000374994 ERICH6BQ5W0A0 696 aa27.87■■■□□ 2.05
TGFBR1-202ENST00000374994 FHAD1B1AJZ9 1412 aa27.87■■■□□ 2.05
TGFBR1-202ENST00000374994 CDCA8Q53HL2 280 aa27.86■■■□□ 2.05
TGFBR1-202ENST00000374994 NOP58Q9Y2X3 529 aaKnown RBP27.86■■■□□ 2.05
TGFBR1-202ENST00000374994 SIN3AQ96ST3 1273 aa27.85■■■□□ 2.05
TGFBR1-202ENST00000374994 MYH16Q9H6N6 1097 aa27.79■■■□□ 2.04
TGFBR1-202ENST00000374994 SOGA1O94964 1423 aa27.78■■■□□ 2.04
TGFBR1-202ENST00000374994 STAG3Q9UJ98 1225 aa27.76■■■□□ 2.03
TGFBR1-202ENST00000374994 CARD11Q9BXL7 1154 aa27.75■■■□□ 2.03
TGFBR1-202ENST00000374994 CECR2Q9BXF3 1484 aa27.74■■■□□ 2.03
TGFBR1-202ENST00000374994 SETD5Q9C0A6 1442 aa27.74■■■□□ 2.03
TGFBR1-202ENST00000374994 PLEKHD1A6NEE1 506 aa27.73■■■□□ 2.03
TGFBR1-202ENST00000374994 GOLGA6L22H0YM25 854 aa27.73■■■□□ 2.03
TGFBR1-202ENST00000374994 KNSTRNQ9Y448 316 aa27.71■■■□□ 2.03
TGFBR1-202ENST00000374994 ESF1Q9H501 851 aaKnown RBP27.71■■■□□ 2.03
TGFBR1-202ENST00000374994 RBM19Q9Y4C8 960 aaKnown RBP27.7■■■□□ 2.02
TGFBR1-202ENST00000374994 CHMP7Q8WUX9 453 aaPredicted RBP27.7■■■□□ 2.02
TGFBR1-202ENST00000374994 TRIM44Q96DX7 344 aaPredicted RBP27.7■■■□□ 2.02
TGFBR1-202ENST00000374994 CFDP1Q9UEE9 299 aaPredicted RBP27.69■■■□□ 2.02
TGFBR1-202ENST00000374994 ARXQ96QS3 562 aa27.68■■■□□ 2.02
TGFBR1-202ENST00000374994 NPM1P06748 294 aaKnown RBP eCLIP27.68■■■□□ 2.02
TGFBR1-202ENST00000374994 CFAP53Q96M91 514 aa27.66■■■□□ 2.02
TGFBR1-202ENST00000374994 B4GALNT3Q6L9W6 998 aa27.6■■■□□ 2.01
TGFBR1-202ENST00000374994 CARMIL1Q5VZK9 1371 aa27.56■■■□□ 2
TGFBR1-202ENST00000374994 NCLP19338 710 aaKnown RBP27.55■■■□□ 2
TGFBR1-202ENST00000374994 RGL3Q3MIN7 710 aa27.54■■■□□ 2
TGFBR1-202ENST00000374994 LAS1LQ9Y4W2 734 aaKnown RBP27.53■■■□□ 2
TGFBR1-202ENST00000374994 TSHZ2Q9NRE2 1034 aa27.5■■□□□ 1.99
TGFBR1-202ENST00000374994 ARHGAP35Q9NRY4 1499 aa27.5■■□□□ 1.99
TGFBR1-202ENST00000374994 MS4A1P11836 297 aa27.5■■□□□ 1.99
TGFBR1-202ENST00000374994 MROH2BQ7Z745 1585 aa27.49■■□□□ 1.99
TGFBR1-202ENST00000374994 CCDC88BA6NC98 1476 aa27.49■■□□□ 1.99
TGFBR1-202ENST00000374994 HSPA5P11021 654 aaKnown RBP27.48■■□□□ 1.99
TGFBR1-202ENST00000374994 CHMP4BQ9H444 224 aaKnown RBP27.47■■□□□ 1.99
TGFBR1-202ENST00000374994 RAB3GAP2Q9H2M9 1393 aa27.46■■□□□ 1.99
TGFBR1-202ENST00000374994 DEKP35659 375 aaKnown RBP27.46■■□□□ 1.99
TGFBR1-202ENST00000374994 FTSJ3Q8IY81 847 aaKnown RBP27.46■■□□□ 1.99
TGFBR1-202ENST00000374994 KANK4Q5T7N3 995 aaPredicted RBP27.44■■□□□ 1.98
TGFBR1-202ENST00000374994 CUX2O14529 1486 aa27.43■■□□□ 1.98
TGFBR1-202ENST00000374994 RGS3P49796 1198 aa27.42■■□□□ 1.98
TGFBR1-202ENST00000374994 PPP1R15AO75807 674 aaPredicted RBP27.41■■□□□ 1.98
TGFBR1-202ENST00000374994 CASC1Q6TDU7 716 aa27.41■■□□□ 1.98
TGFBR1-202ENST00000374994 TMF1P82094 1093 aa27.39■■□□□ 1.98
TGFBR1-202ENST00000374994 NUDCQ9Y266 331 aa27.38■■□□□ 1.97
TGFBR1-202ENST00000374994 ABCC8Q09428 1581 aa27.37■■□□□ 1.97
TGFBR1-202ENST00000374994 TCERG1O14776 1098 aaKnown RBP27.35■■□□□ 1.97
TGFBR1-202ENST00000374994 SENP3-EIF4A1A0A087X0R7 540 aa27.34■■□□□ 1.97
TGFBR1-202ENST00000374994 L1TD1Q5T7N2 865 aaKnown RBP27.34■■□□□ 1.97
TGFBR1-202ENST00000374994 MAPK8IP3Q9UPT6 1336 aa27.34■■□□□ 1.97
TGFBR1-202ENST00000374994 RALBP1Q15311 655 aa27.3■■□□□ 1.96
TGFBR1-202ENST00000374994 CC2D1BQ5T0F9 858 aaKnown RBP27.28■■□□□ 1.96
TGFBR1-202ENST00000374994 PTMAP06454 111 aaKnown RBP27.28■■□□□ 1.96
TGFBR1-202ENST00000374994 TNNT2P45379 298 aaPredicted RBP27.28■■□□□ 1.96
TGFBR1-202ENST00000374994 KTN1Q86UP2 1357 aaKnown RBP27.28■■□□□ 1.96
TGFBR1-202ENST00000374994 FMN1Q68DA7 1419 aa27.27■■□□□ 1.96
TGFBR1-202ENST00000374994 DCAF11Q8TEB1 546 aa27.27■■□□□ 1.96
TGFBR1-202ENST00000374994 TOP2AP11388 1531 aaKnown RBP27.26■■□□□ 1.96
TGFBR1-202ENST00000374994 FRAT1Q92837 279 aaPredicted RBP27.26■■□□□ 1.95
TGFBR1-202ENST00000374994 KCNH8Q96L42 1107 aa27.26■■□□□ 1.95
TGFBR1-202ENST00000374994 NAP1L5Q96NT1 182 aaPredicted RBP27.26■■□□□ 1.95
TGFBR1-202ENST00000374994 PNNQ9H307 717 aaKnown RBP27.23■■□□□ 1.95
TGFBR1-202ENST00000374994 DHX57Q6P158 1386 aaKnown RBP27.23■■□□□ 1.95
TGFBR1-202ENST00000374994 RTN4Q9NQC3 1192 aaKnown RBP27.23■■□□□ 1.95
TGFBR1-202ENST00000374994 NEUROD2Q15784 382 aa27.23■■□□□ 1.95
TGFBR1-202ENST00000374994 RCAN3Q9UKA8 241 aa27.22■■□□□ 1.95
TGFBR1-202ENST00000374994 HSCBQ8IWL3 235 aa27.19■■□□□ 1.94
TGFBR1-202ENST00000374994 CFAP44Q96MT7 982 aa27.19■■□□□ 1.94
TGFBR1-202ENST00000374994 ARID4BQ4LE39 1312 aaPredicted RBP27.19■■□□□ 1.94
TGFBR1-202ENST00000374994 HSP90AB1P08238 724 aaKnown RBP27.19■■□□□ 1.94
TGFBR1-202ENST00000374994 IPO9Q96P70 1041 aaKnown RBP27.18■■□□□ 1.94
TGFBR1-202ENST00000374994 MPHOSPH9Q99550 1183 aa27.18■■□□□ 1.94
TGFBR1-202ENST00000374994 SMARCA2P51531 1590 aa27.17■■□□□ 1.94
TGFBR1-202ENST00000374994 PDE3BQ13370 1112 aa27.16■■□□□ 1.94
TGFBR1-202ENST00000374994 ROCK2O75116 1388 aaKnown RBP27.14■■□□□ 1.94
TGFBR1-202ENST00000374994 PKD2Q13563 968 aa27.13■■□□□ 1.93
TGFBR1-202ENST00000374994 DNTTIP2Q5QJE6 756 aaKnown RBP27.13■■□□□ 1.93
TGFBR1-202ENST00000374994 PTMSP20962 102 aa27.1■■□□□ 1.93
TGFBR1-202ENST00000374994 ZRSR1Q15695 479 aaKnown RBP27.07■■□□□ 1.92
TGFBR1-202ENST00000374994 EIF4G1Q04637 1599 aaKnown RBP27.05■■□□□ 1.92
TGFBR1-202ENST00000374994 KANK1Q14678 1352 aa27.05■■□□□ 1.92
TGFBR1-202ENST00000374994 USP35Q9P2H5 1018 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms