RNA–Protein interactions for RNA: ENST00000374884.2

SPIN4-201, Transcript of spindlin family member 4, humanhuman

APPRIS P1 BASIC

Gene SPIN4, Length 4,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4-201ENST00000374884 NOP58Q9Y2X3 529 aaKnown RBP12.9□□□□□ -0.34
SPIN4-201ENST00000374884 TMC1Q8TDI8 760 aa12.88□□□□□ -0.35
SPIN4-201ENST00000374884 KCNH8Q96L42 1107 aa12.88□□□□□ -0.35
SPIN4-201ENST00000374884 B4GALNT3Q6L9W6 998 aa12.87□□□□□ -0.35
SPIN4-201ENST00000374884 WIZO95785 1651 aa12.87□□□□□ -0.35
SPIN4-201ENST00000374884 KANK4Q5T7N3 995 aaPredicted RBP12.86□□□□□ -0.35
SPIN4-201ENST00000374884 DHX57Q6P158 1386 aaKnown RBP12.85□□□□□ -0.35
SPIN4-201ENST00000374884 ERICH6BQ5W0A0 696 aa12.85□□□□□ -0.35
SPIN4-201ENST00000374884 BAZ1BQ9UIG0 1483 aaKnown RBP12.84□□□□□ -0.35
SPIN4-201ENST00000374884 CHIC2Q9UKJ5 165 aa12.83□□□□□ -0.36
SPIN4-201ENST00000374884 SALL2Q9Y467 1007 aaPredicted RBP12.83□□□□□ -0.36
SPIN4-201ENST00000374884 MTUS2Q5JR59 1369 aa12.81□□□□□ -0.36
SPIN4-201ENST00000374884 RAB3GAP2Q9H2M9 1393 aa12.79□□□□□ -0.36
SPIN4-201ENST00000374884 SETD5Q9C0A6 1442 aa12.79□□□□□ -0.36
SPIN4-201ENST00000374884 PPM1GO15355 546 aaPredicted RBP12.77□□□□□ -0.36
SPIN4-201ENST00000374884 KIF27Q86VH2 1401 aa12.77□□□□□ -0.37
SPIN4-201ENST00000374884 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.37
SPIN4-201ENST00000374884 ARID3CA6NKF2 412 aa12.76□□□□□ -0.37
SPIN4-201ENST00000374884 PPP1R15AO75807 674 aaPredicted RBP12.76□□□□□ -0.37
SPIN4-201ENST00000374884 NEFMP07197 916 aa12.76□□□□□ -0.37
SPIN4-201ENST00000374884 FANCIQ9NVI1 1328 aa12.75□□□□□ -0.37
SPIN4-201ENST00000374884 DDRGK1Q96HY6 314 aa12.75□□□□□ -0.37
SPIN4-201ENST00000374884 RUSC2Q8N2Y8 1516 aa12.75□□□□□ -0.37
SPIN4-201ENST00000374884 RRP7BPQ9NSQ0 103 aa12.75□□□□□ -0.37
SPIN4-201ENST00000374884 GLIPR1L2Q4G1C9 344 aa12.75□□□□□ -0.37
SPIN4-201ENST00000374884 CANXP27824 592 aaKnown RBP12.74□□□□□ -0.37
SPIN4-201ENST00000374884 LAS1LQ9Y4W2 734 aaKnown RBP12.73□□□□□ -0.37
SPIN4-201ENST00000374884 SLC4A1APQ9BWU0 796 aaKnown RBP12.71□□□□□ -0.37
SPIN4-201ENST00000374884 SENP3-EIF4A1A0A087X0R7 540 aa12.71□□□□□ -0.38
SPIN4-201ENST00000374884 SMARCA4P51532 1647 aa12.71□□□□□ -0.38
SPIN4-201ENST00000374884 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
SPIN4-201ENST00000374884 FBLN2P98095 1184 aa12.68□□□□□ -0.38
SPIN4-201ENST00000374884 UPF2Q9HAU5 1272 aaKnown RBP12.68□□□□□ -0.38
SPIN4-201ENST00000374884 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.68□□□□□ -0.38
SPIN4-201ENST00000374884 TOP2AP11388 1531 aaKnown RBP12.68□□□□□ -0.38
SPIN4-201ENST00000374884 ZNF777Q9ULD5 760 aaPredicted RBP12.68□□□□□ -0.38
SPIN4-201ENST00000374884 RAPGEF2Q9Y4G8 1499 aa12.68□□□□□ -0.38
SPIN4-201ENST00000374884 HSPA5P11021 654 aaKnown RBP12.67□□□□□ -0.38
SPIN4-201ENST00000374884 BICRAQ9NZM4 1560 aa12.66□□□□□ -0.38
SPIN4-201ENST00000374884 IPO9Q96P70 1041 aaKnown RBP12.66□□□□□ -0.38
SPIN4-201ENST00000374884 FHAD1B1AJZ9 1412 aa12.66□□□□□ -0.38
SPIN4-201ENST00000374884 DNAJC5BQ9UF47 199 aa12.63□□□□□ -0.39
SPIN4-201ENST00000374884 KDM2AQ9Y2K7 1162 aa12.62□□□□□ -0.39
SPIN4-201ENST00000374884 ARXQ96QS3 562 aa12.61□□□□□ -0.39
SPIN4-201ENST00000374884 SMARCA2P51531 1590 aa12.59□□□□□ -0.39
SPIN4-201ENST00000374884 WDR43Q15061 677 aaKnown RBP eCLIP12.59□□□□□ -0.39
SPIN4-201ENST00000374884 UNC13AQ9UPW8 1703 aa12.59□□□□□ -0.39
SPIN4-201ENST00000374884 ANP32BQ92688 251 aaKnown RBP12.58□□□□□ -0.4
SPIN4-201ENST00000374884 BECN1Q14457 450 aa12.57□□□□□ -0.4
SPIN4-201ENST00000374884 TCERG1O14776 1098 aaKnown RBP12.57□□□□□ -0.4
SPIN4-201ENST00000374884 ARHGAP35Q9NRY4 1499 aa12.56□□□□□ -0.4
SPIN4-201ENST00000374884 CARMIL1Q5VZK9 1371 aa12.56□□□□□ -0.4
SPIN4-201ENST00000374884 NUDCQ9Y266 331 aa12.56□□□□□ -0.4
SPIN4-201ENST00000374884 EIF4G1Q04637 1599 aaKnown RBP12.55□□□□□ -0.4
SPIN4-201ENST00000374884 HSP90AA1P07900 732 aaKnown RBP12.54□□□□□ -0.4
SPIN4-201ENST00000374884 CARD11Q9BXL7 1154 aa12.54□□□□□ -0.4
SPIN4-201ENST00000374884 USP35Q9P2H5 1018 aa12.53□□□□□ -0.4
SPIN4-201ENST00000374884 ZBED9Q6R2W3 1325 aa12.52□□□□□ -0.4
SPIN4-201ENST00000374884 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.52□□□□□ -0.41
SPIN4-201ENST00000374884 PRKRIP1Q9H875 184 aaPredicted RBP12.52□□□□□ -0.41
SPIN4-201ENST00000374884 KIF21BO75037 1637 aa12.51□□□□□ -0.41
SPIN4-201ENST00000374884 CUX2O14529 1486 aa12.5□□□□□ -0.41
SPIN4-201ENST00000374884 RGS3P49796 1198 aa12.5□□□□□ -0.41
SPIN4-201ENST00000374884 TSPY4P0CV99 314 aa12.5□□□□□ -0.41
SPIN4-201ENST00000374884 TSPY10P0CW01 314 aa12.5□□□□□ -0.41
SPIN4-201ENST00000374884 RCAN3Q9UKA8 241 aa12.5□□□□□ -0.41
SPIN4-201ENST00000374884 L3MBTL2Q969R5 705 aa12.48□□□□□ -0.41
SPIN4-201ENST00000374884 MSH5O43196 834 aa12.47□□□□□ -0.41
SPIN4-201ENST00000374884 MPHOSPH9Q99550 1183 aa12.47□□□□□ -0.41
SPIN4-201ENST00000374884 FMN1Q68DA7 1419 aa12.47□□□□□ -0.41
SPIN4-201ENST00000374884 TRIM44Q96DX7 344 aaPredicted RBP12.47□□□□□ -0.41
SPIN4-201ENST00000374884 FOXD1Q16676 465 aa12.46□□□□□ -0.41
SPIN4-201ENST00000374884 RRBP1Q9P2E9 1410 aaKnown RBP12.46□□□□□ -0.41
SPIN4-201ENST00000374884 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
SPIN4-201ENST00000374884 NAP1L5Q96NT1 182 aaPredicted RBP12.44□□□□□ -0.42
SPIN4-201ENST00000374884 PDE4AP27815 886 aa12.43□□□□□ -0.42
SPIN4-201ENST00000374884 NCAPD3P42695 1498 aa12.42□□□□□ -0.42
SPIN4-201ENST00000374884 RGL3Q3MIN7 710 aa12.42□□□□□ -0.42
SPIN4-201ENST00000374884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.42□□□□□ -0.42
SPIN4-201ENST00000374884 CFDP1Q9UEE9 299 aaPredicted RBP12.41□□□□□ -0.42
SPIN4-201ENST00000374884 L1TD1Q5T7N2 865 aaKnown RBP12.41□□□□□ -0.42
SPIN4-201ENST00000374884 GSE1Q14687 1217 aa12.4□□□□□ -0.42
SPIN4-201ENST00000374884 KNSTRNQ9Y448 316 aa12.4□□□□□ -0.42
SPIN4-201ENST00000374884 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
SPIN4-201ENST00000374884 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
SPIN4-201ENST00000374884 RALBP1Q15311 655 aa12.4□□□□□ -0.42
SPIN4-201ENST00000374884 CC2D1BQ5T0F9 858 aaKnown RBP12.39□□□□□ -0.43
SPIN4-201ENST00000374884 PDE3BQ13370 1112 aa12.39□□□□□ -0.43
SPIN4-201ENST00000374884 ERCC6Q03468 1493 aa12.38□□□□□ -0.43
SPIN4-201ENST00000374884 NESP48681 1621 aa12.37□□□□□ -0.43
SPIN4-201ENST00000374884 CCDC18Q5T9S5 1454 aa12.37□□□□□ -0.43
SPIN4-201ENST00000374884 TDRD9Q8NDG6 1382 aaKnown RBP12.37□□□□□ -0.43
SPIN4-201ENST00000374884 WASHC2AQ641Q2 1341 aa12.37□□□□□ -0.43
SPIN4-201ENST00000374884 PHLDB1Q86UU1 1377 aa12.37□□□□□ -0.43
SPIN4-201ENST00000374884 MS4A1P11836 297 aa12.36□□□□□ -0.43
SPIN4-201ENST00000374884 EXOC6Q8TAG9 804 aa12.36□□□□□ -0.43
SPIN4-201ENST00000374884 DCAF11Q8TEB1 546 aa12.36□□□□□ -0.43
SPIN4-201ENST00000374884 ANO8Q9HCE9 1232 aaPredicted RBP12.36□□□□□ -0.43
SPIN4-201ENST00000374884 ARAP1Q96P48 1450 aa12.36□□□□□ -0.43
SPIN4-201ENST00000374884 RRP1P56182 461 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms