RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 FAM69CQ0P6D2 419 aa33.82■■■■□ 3
TRAPPC3-204ENST00000373166 KIF13AQ9H1H9 1805 aa33.81■■■■□ 3
TRAPPC3-204ENST00000373166 RUSC2Q8N2Y8 1516 aa33.8■■■■□ 3
TRAPPC3-204ENST00000373166 ABCC10Q5T3U5 1492 aa33.76■■■■□ 3
TRAPPC3-204ENST00000373166 MAPKBP1O60336 1514 aa33.7■■■□□ 2.99
TRAPPC3-204ENST00000373166 KIAA0586Q9BVV6 1533 aa33.69■■■□□ 2.98
TRAPPC3-204ENST00000373166 IGF1RP08069 1367 aa33.68■■■□□ 2.98
TRAPPC3-204ENST00000373166 KIF27Q86VH2 1401 aa33.63■■■□□ 2.97
TRAPPC3-204ENST00000373166 ADCY10Q96PN6 1610 aa33.62■■■□□ 2.97
TRAPPC3-204ENST00000373166 DIP2BQ9P265 1576 aa33.6■■■□□ 2.97
TRAPPC3-204ENST00000373166 CUL7Q14999 1698 aa33.53■■■□□ 2.96
TRAPPC3-204ENST00000373166 PTPRGP23470 1445 aa33.5■■■□□ 2.95
TRAPPC3-204ENST00000373166 CARMIL1Q5VZK9 1371 aa33.45■■■□□ 2.94
TRAPPC3-204ENST00000373166 KDM6BO15054 1643 aa33.43■■■□□ 2.94
TRAPPC3-204ENST00000373166 TTBK1Q5TCY1 1321 aaPredicted RBP33.43■■■□□ 2.94
TRAPPC3-204ENST00000373166 CARMIL2Q6F5E8 1435 aa33.41■■■□□ 2.94
TRAPPC3-204ENST00000373166 TNIKQ9UKE5 1360 aa33.39■■■□□ 2.94
TRAPPC3-204ENST00000373166 KDM4FA0A1W2PPD8 638 aa33.36■■■□□ 2.93
TRAPPC3-204ENST00000373166 ABCC2Q92887 1545 aa33.32■■■□□ 2.92
TRAPPC3-204ENST00000373166 TSPOAP1O95153 1857 aa33.31■■■□□ 2.92
TRAPPC3-204ENST00000373166 PLB1Q6P1J6 1458 aa33.26■■■□□ 2.92
TRAPPC3-204ENST00000373166 ASXL2Q76L83 1435 aa33.26■■■□□ 2.91
TRAPPC3-204ENST00000373166 IQGAP2Q13576 1575 aa33.25■■■□□ 2.91
TRAPPC3-204ENST00000373166 UHRF1BP1LA0JNW5 1464 aa33.21■■■□□ 2.91
TRAPPC3-204ENST00000373166 UACAQ9BZF9 1416 aa33.19■■■□□ 2.9
TRAPPC3-204ENST00000373166 GLI2P10070 1586 aa33.17■■■□□ 2.9
TRAPPC3-204ENST00000373166 DISP1Q96F81 1524 aa33.14■■■□□ 2.9
TRAPPC3-204ENST00000373166 RAPGEF2Q9Y4G8 1499 aa33.07■■■□□ 2.88
TRAPPC3-204ENST00000373166 KDM5BQ9UGL1 1544 aa33.06■■■□□ 2.88
TRAPPC3-204ENST00000373166 PPRC1Q5VV67 1664 aaKnown RBP33.04■■■□□ 2.88
TRAPPC3-204ENST00000373166 EPRSP07814 1512 aaKnown RBP33.04■■■□□ 2.88
TRAPPC3-204ENST00000373166 UGGT2Q9NYU1 1516 aa33.04■■■□□ 2.88
TRAPPC3-204ENST00000373166 TEX14Q8IWB6 1497 aa32.97■■■□□ 2.87
TRAPPC3-204ENST00000373166 COL17A1Q9UMD9 1497 aaPredicted RBP32.97■■■□□ 2.87
TRAPPC3-204ENST00000373166 ADGRL1O94910 1474 aa32.95■■■□□ 2.87
TRAPPC3-204ENST00000373166 KIAA0556O60303 1618 aa32.93■■■□□ 2.86
TRAPPC3-204ENST00000373166 MAP3K4Q9Y6R4 1608 aa32.93■■■□□ 2.86
TRAPPC3-204ENST00000373166 ZCCHC11Q5TAX3 1644 aaKnown RBP32.91■■■□□ 2.86
TRAPPC3-204ENST00000373166 WDR7Q9Y4E6 1490 aa32.86■■■□□ 2.85
TRAPPC3-204ENST00000373166 GOLGA3Q08378 1498 aa32.79■■■□□ 2.84
TRAPPC3-204ENST00000373166 ILDR1Q86SU0 546 aaPredicted RBP32.78■■■□□ 2.84
TRAPPC3-204ENST00000373166 KCNH8Q96L42 1107 aa32.75■■■□□ 2.83
TRAPPC3-204ENST00000373166 CD109Q6YHK3 1445 aa32.74■■■□□ 2.83
TRAPPC3-204ENST00000373166 MAGI3Q5TCQ9 1506 aa32.71■■■□□ 2.83
TRAPPC3-204ENST00000373166 ABCA8O94911 1581 aa32.67■■■□□ 2.82
TRAPPC3-204ENST00000373166 CTTNBP2Q8WZ74 1663 aa32.67■■■□□ 2.82
TRAPPC3-204ENST00000373166 FAM9AQ8IZU1 332 aaPredicted RBP32.65■■■□□ 2.82
TRAPPC3-204ENST00000373166 CFAP43Q8NDM7 1665 aa32.62■■■□□ 2.81
TRAPPC3-204ENST00000373166 PRXQ9BXM0 1461 aa32.61■■■□□ 2.81
TRAPPC3-204ENST00000373166 HECW2Q9P2P5 1572 aa32.6■■■□□ 2.81
TRAPPC3-204ENST00000373166 ARID3CA6NKF2 412 aa32.5■■■□□ 2.79
TRAPPC3-204ENST00000373166 P3H3Q8IVL6 736 aa32.5■■■□□ 2.79
TRAPPC3-204ENST00000373166 ATP10BO94823 1461 aa32.46■■■□□ 2.79
TRAPPC3-204ENST00000373166 ARAP3Q8WWN8 1544 aa32.46■■■□□ 2.79
TRAPPC3-204ENST00000373166 PHLDB1Q86UU1 1377 aa32.42■■■□□ 2.78
TRAPPC3-204ENST00000373166 KIF21BO75037 1637 aa32.37■■■□□ 2.77
TRAPPC3-204ENST00000373166 CSRNP3Q8WYN3 585 aa32.33■■■□□ 2.77
TRAPPC3-204ENST00000373166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.32■■■□□ 2.76
TRAPPC3-204ENST00000373166 HNRNPUL2Q1KMD3 747 aaKnown RBP32.32■■■□□ 2.76
TRAPPC3-204ENST00000373166 ABCA9Q8IUA7 1624 aa32.31■■■□□ 2.76
TRAPPC3-204ENST00000373166 RAPGEF3O95398 923 aa32.3■■■□□ 2.76
TRAPPC3-204ENST00000373166 NEO1Q92859 1461 aa32.26■■■□□ 2.75
TRAPPC3-204ENST00000373166 SAMD9Q5K651 1589 aa32.25■■■□□ 2.75
TRAPPC3-204ENST00000373166 RAPGEF6Q8TEU7 1601 aa32.22■■■□□ 2.75
TRAPPC3-204ENST00000373166 PTPRMP28827 1452 aa32.21■■■□□ 2.75
TRAPPC3-204ENST00000373166 ARID4BQ4LE39 1312 aaPredicted RBP32.18■■■□□ 2.74
TRAPPC3-204ENST00000373166 RANGAP1P46060 587 aaPredicted RBP32.16■■■□□ 2.74
TRAPPC3-204ENST00000373166 ADAMTSL3P82987 1691 aa32.15■■■□□ 2.74
TRAPPC3-204ENST00000373166 NUP153P49790 1475 aaKnown RBP32.15■■■□□ 2.74
TRAPPC3-204ENST00000373166 PLEKHD1A6NEE1 506 aa32.14■■■□□ 2.74
TRAPPC3-204ENST00000373166 FBXO41Q8TF61 875 aa32.1■■■□□ 2.73
TRAPPC3-204ENST00000373166 FHOD3Q2V2M9 1422 aa32.09■■■□□ 2.73
TRAPPC3-204ENST00000373166 EEA1Q15075 1411 aa32.08■■■□□ 2.73
TRAPPC3-204ENST00000373166 FRMPD1Q5SYB0 1578 aa32.07■■■□□ 2.72
TRAPPC3-204ENST00000373166 DENND4BO75064 1496 aaPredicted RBP32.04■■■□□ 2.72
TRAPPC3-204ENST00000373166 BCORL1Q5H9F3 1711 aa32.03■■■□□ 2.72
TRAPPC3-204ENST00000373166 AKNAQ7Z591 1439 aa32.01■■■□□ 2.72
TRAPPC3-204ENST00000373166 MADDQ8WXG6 1647 aa31.99■■■□□ 2.71
TRAPPC3-204ENST00000373166 FANCAO15360 1455 aa31.98■■■□□ 2.71
TRAPPC3-204ENST00000373166 ARHGEF40Q8TER5 1519 aa31.96■■■□□ 2.71
TRAPPC3-204ENST00000373166 PCF11O94913 1555 aaKnown RBP31.96■■■□□ 2.71
TRAPPC3-204ENST00000373166 LMTK3Q96Q04 1460 aa31.92■■■□□ 2.7
TRAPPC3-204ENST00000373166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.92■■■□□ 2.7
TRAPPC3-204ENST00000373166 POGZQ7Z3K3 1410 aa31.92■■■□□ 2.7
TRAPPC3-204ENST00000373166 CFAP74Q9C0B2 1584 aa31.91■■■□□ 2.7
TRAPPC3-204ENST00000373166 EFCAB5A4FU69 1503 aa31.9■■■□□ 2.7
TRAPPC3-204ENST00000373166 RICTORQ6R327 1708 aa31.89■■■□□ 2.7
TRAPPC3-204ENST00000373166 RIMS1Q86UR5 1692 aaKnown RBP31.84■■■□□ 2.69
TRAPPC3-204ENST00000373166 PLPPR3Q6T4P5 718 aa31.84■■■□□ 2.69
TRAPPC3-204ENST00000373166 ZMYM4Q5VZL5 1548 aa31.84■■■□□ 2.69
TRAPPC3-204ENST00000373166 MAGI2Q86UL8 1455 aa31.84■■■□□ 2.69
TRAPPC3-204ENST00000373166 TTC37Q6PGP7 1564 aa31.83■■■□□ 2.69
TRAPPC3-204ENST00000373166 ZFYVE16Q7Z3T8 1539 aa31.82■■■□□ 2.68
TRAPPC3-204ENST00000373166 YEATS2Q9ULM3 1422 aa31.82■■■□□ 2.68
TRAPPC3-204ENST00000373166 HSPA2P54652 639 aa31.8■■■□□ 2.68
TRAPPC3-204ENST00000373166 PLCH2O75038 1416 aa31.78■■■□□ 2.68
TRAPPC3-204ENST00000373166 SCAPERQ9BY12 1400 aa31.78■■■□□ 2.68
TRAPPC3-204ENST00000373166 CHIC1Q5VXU3 224 aa31.78■■■□□ 2.68
TRAPPC3-204ENST00000373166 CDK13Q14004 1512 aaKnown RBP31.78■■■□□ 2.68
TRAPPC3-204ENST00000373166 MLECQ14165 292 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms