RNA–Protein interactions for RNA: ENST00000372862.7

PABPC4-204, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5 BASIC

Gene PABPC4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-204ENST00000372862 MAP3K1Q13233 1512 aa30.73■■■□□ 2.51
PABPC4-204ENST00000372862 HNRNPUL2Q1KMD3 747 aaKnown RBP30.73■■■□□ 2.51
PABPC4-204ENST00000372862 PBRM1Q86U86 1689 aa30.69■■■□□ 2.5
PABPC4-204ENST00000372862 TIAM1Q13009 1591 aa30.68■■■□□ 2.5
PABPC4-204ENST00000372862 WDR62O43379 1518 aa30.64■■■□□ 2.5
PABPC4-204ENST00000372862 P3H3Q8IVL6 736 aa30.62■■■□□ 2.49
PABPC4-204ENST00000372862 PCF11O94913 1555 aaKnown RBP30.61■■■□□ 2.49
PABPC4-204ENST00000372862 FHOD3Q2V2M9 1422 aa30.6■■■□□ 2.49
PABPC4-204ENST00000372862 RRBP1Q9P2E9 1410 aaKnown RBP30.6■■■□□ 2.49
PABPC4-204ENST00000372862 CFAP43Q8NDM7 1665 aa30.57■■■□□ 2.49
PABPC4-204ENST00000372862 IFT140Q96RY7 1462 aa30.57■■■□□ 2.48
PABPC4-204ENST00000372862 AQRO60306 1485 aaKnown RBP eCLIP30.55■■■□□ 2.485e-7■■■■■ 32.5
PABPC4-204ENST00000372862 FYCO1Q9BQS8 1478 aa30.54■■■□□ 2.48
PABPC4-204ENST00000372862 SAMD9Q5K651 1589 aa30.53■■■□□ 2.48
PABPC4-204ENST00000372862 LRRC9Q6ZRR7 1453 aa30.53■■■□□ 2.48
PABPC4-204ENST00000372862 FMN1Q68DA7 1419 aa30.51■■■□□ 2.48
PABPC4-204ENST00000372862 ERCC6Q03468 1493 aa30.51■■■□□ 2.48
PABPC4-204ENST00000372862 GRIN2BQ13224 1484 aa30.51■■■□□ 2.48
PABPC4-204ENST00000372862 ADAMTS12P58397 1594 aa30.51■■■□□ 2.47
PABPC4-204ENST00000372862 CASKIN1Q8WXD9 1431 aa30.51■■■□□ 2.47
PABPC4-204ENST00000372862 CCNB3Q8WWL7 1395 aa30.48■■■□□ 2.47
PABPC4-204ENST00000372862 ATP1B4Q9UN42 357 aaPredicted RBP30.44■■■□□ 2.46
PABPC4-204ENST00000372862 ZNF608Q9ULD9 1512 aaPredicted RBP30.42■■■□□ 2.46
PABPC4-204ENST00000372862 THOC2Q8NI27 1593 aaKnown RBP30.41■■■□□ 2.46
PABPC4-204ENST00000372862 SNAPC4Q5SXM2 1469 aa30.37■■■□□ 2.45
PABPC4-204ENST00000372862 IQGAP2Q13576 1575 aa30.36■■■□□ 2.45
PABPC4-204ENST00000372862 EIF4G3O43432 1585 aaKnown RBP30.33■■■□□ 2.45
PABPC4-204ENST00000372862 PHLDB1Q86UU1 1377 aa30.29■■■□□ 2.44
PABPC4-204ENST00000372862 LRRIQ1Q96JM4 1722 aa30.24■■■□□ 2.43
PABPC4-204ENST00000372862 CLSPNQ9HAW4 1339 aa30.21■■■□□ 2.43
PABPC4-204ENST00000372862 UGGT2Q9NYU1 1516 aa30.18■■■□□ 2.42
PABPC4-204ENST00000372862 ITGAEP38570 1179 aa30.18■■■□□ 2.42
PABPC4-204ENST00000372862 DHX57Q6P158 1386 aaKnown RBP30.17■■■□□ 2.42
PABPC4-204ENST00000372862 MAGI1Q96QZ7 1491 aaPredicted RBP30.16■■■□□ 2.42
PABPC4-204ENST00000372862 MTUS2Q5JR59 1369 aa30.16■■■□□ 2.42
PABPC4-204ENST00000372862 GRIN2AQ12879 1464 aa30.16■■■□□ 2.42
PABPC4-204ENST00000372862 KIAA0586Q9BVV6 1533 aa30.15■■■□□ 2.42
PABPC4-204ENST00000372862 HECW1Q76N89 1606 aa30.12■■■□□ 2.41
PABPC4-204ENST00000372862 CCDC18Q5T9S5 1454 aa30.12■■■□□ 2.41
PABPC4-204ENST00000372862 FAM50AQ14320 339 aaKnown RBP30.11■■■□□ 2.41
PABPC4-204ENST00000372862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.1■■■□□ 2.41
PABPC4-204ENST00000372862 EHBP1L1Q8N3D4 1523 aa30.08■■■□□ 2.41
PABPC4-204ENST00000372862 SUPT6HQ7KZ85 1726 aaKnown RBP30.07■■■□□ 2.4
PABPC4-204ENST00000372862 SYNJ2O15056 1496 aa30.06■■■□□ 2.4
PABPC4-204ENST00000372862 FGD6Q6ZV73 1430 aa30.03■■■□□ 2.4
PABPC4-204ENST00000372862 KIAA0556O60303 1618 aa30.03■■■□□ 2.4
PABPC4-204ENST00000372862 RAB3GAP2Q9H2M9 1393 aa30.02■■■□□ 2.4
PABPC4-204ENST00000372862 SETD5Q9C0A6 1442 aa30.02■■■□□ 2.4
PABPC4-204ENST00000372862 CHMP7Q8WUX9 453 aaPredicted RBP30.01■■■□□ 2.4
PABPC4-204ENST00000372862 NCOA2Q15596 1464 aa30■■■□□ 2.39
PABPC4-204ENST00000372862 DISP1Q96F81 1524 aa29.99■■■□□ 2.39
PABPC4-204ENST00000372862 EPRSP07814 1512 aaKnown RBP29.98■■■□□ 2.39
PABPC4-204ENST00000372862 ZNF316A6NFI3 1004 aaPredicted RBP29.96■■■□□ 2.39
PABPC4-204ENST00000372862 CEP170Q5SW79 1584 aa29.96■■■□□ 2.39
PABPC4-204ENST00000372862 MYOM3Q5VTT5 1437 aa29.95■■■□□ 2.38
PABPC4-204ENST00000372862 MAGI3Q5TCQ9 1506 aa29.94■■■□□ 2.38
PABPC4-204ENST00000372862 ARHGEF11O15085 1522 aa29.91■■■□□ 2.38
PABPC4-204ENST00000372862 FBLN2P98095 1184 aa29.89■■■□□ 2.38
PABPC4-204ENST00000372862 DIEXFQ68CQ4 756 aaKnown RBP29.89■■■□□ 2.38
PABPC4-204ENST00000372862 CDK13Q14004 1512 aaKnown RBP29.87■■■□□ 2.37
PABPC4-204ENST00000372862 NUP160Q12769 1436 aa29.87■■■□□ 2.37
PABPC4-204ENST00000372862 RAPGEF6Q8TEU7 1601 aa29.85■■■□□ 2.37
PABPC4-204ENST00000372862 PTPN23Q9H3S7 1636 aa29.83■■■□□ 2.37
PABPC4-204ENST00000372862 CARMIL2Q6F5E8 1435 aa29.78■■■□□ 2.36
PABPC4-204ENST00000372862 MAPKBP1O60336 1514 aa29.78■■■□□ 2.36
PABPC4-204ENST00000372862 NUP153P49790 1475 aaKnown RBP29.76■■■□□ 2.36
PABPC4-204ENST00000372862 JPH4Q96JJ6 628 aa29.74■■■□□ 2.35
PABPC4-204ENST00000372862 TCOF1Q13428 1488 aaKnown RBP29.74■■■□□ 2.35
PABPC4-204ENST00000372862 ARID3CA6NKF2 412 aa29.72■■■□□ 2.35
PABPC4-204ENST00000372862 PTPRKQ15262 1439 aa29.71■■■□□ 2.35
PABPC4-204ENST00000372862 MIA2Q96PC5 1412 aa29.71■■■□□ 2.35
PABPC4-204ENST00000372862 HFM1A2PYH4 1435 aa29.7■■■□□ 2.35
PABPC4-204ENST00000372862 CDK11AQ9UQ88 783 aaPredicted RBP29.69■■■□□ 2.34
PABPC4-204ENST00000372862 PLB1Q6P1J6 1458 aa29.63■■■□□ 2.33
PABPC4-204ENST00000372862 NAIPQ13075 1403 aa29.61■■■□□ 2.33
PABPC4-204ENST00000372862 CHD1O14646 1710 aa29.58■■■□□ 2.33
PABPC4-204ENST00000372862 TROQ12816 1431 aaPredicted RBP29.55■■■□□ 2.32
PABPC4-204ENST00000372862 UACAQ9BZF9 1416 aa29.55■■■□□ 2.32
PABPC4-204ENST00000372862 GCC2Q8IWJ2 1684 aa29.55■■■□□ 2.32
PABPC4-204ENST00000372862 AKNAQ7Z591 1439 aa29.52■■■□□ 2.32
PABPC4-204ENST00000372862 ABCA8O94911 1581 aa29.52■■■□□ 2.32
PABPC4-204ENST00000372862 ADCY10Q96PN6 1610 aa29.51■■■□□ 2.31
PABPC4-204ENST00000372862 TIMELESSQ9UNS1 1208 aa29.49■■■□□ 2.31
PABPC4-204ENST00000372862 PRG4Q92954 1404 aaPredicted RBP29.49■■■□□ 2.31
PABPC4-204ENST00000372862 ITSN2Q9NZM3 1697 aa29.48■■■□□ 2.31
PABPC4-204ENST00000372862 SIN3AQ96ST3 1273 aa29.47■■■□□ 2.31
PABPC4-204ENST00000372862 CHIC2Q9UKJ5 165 aa29.46■■■□□ 2.31
PABPC4-204ENST00000372862 NEUROD1Q13562 356 aa29.45■■■□□ 2.3
PABPC4-204ENST00000372862 DNMT1P26358 1616 aaKnown RBP29.44■■■□□ 2.3
PABPC4-204ENST00000372862 RRP7BPQ9NSQ0 103 aa29.44■■■□□ 2.3
PABPC4-204ENST00000372862 DAPK1P53355 1430 aa29.41■■■□□ 2.3
PABPC4-204ENST00000372862 KIF14Q15058 1648 aa29.41■■■□□ 2.3
PABPC4-204ENST00000372862 PTPRGP23470 1445 aa29.38■■■□□ 2.29
PABPC4-204ENST00000372862 SHROOM2Q13796 1616 aa29.38■■■□□ 2.29
PABPC4-204ENST00000372862 ATP10BO94823 1461 aa29.38■■■□□ 2.29
PABPC4-204ENST00000372862 PLEKHD1A6NEE1 506 aa29.36■■■□□ 2.29
PABPC4-204ENST00000372862 ROCK1Q13464 1354 aa29.36■■■□□ 2.29
PABPC4-204ENST00000372862 GPATCH8Q9UKJ3 1502 aaKnown RBP29.36■■■□□ 2.29
PABPC4-204ENST00000372862 ABCC5O15440 1437 aa29.35■■■□□ 2.29
PABPC4-204ENST00000372862 CFDP1Q9UEE9 299 aaPredicted RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms