RNA–Protein interactions for RNA: ENST00000371747.7

TTC39A-203, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-203ENST00000371747 HRCP23327 699 aa35.22■■■■□ 3.23
TTC39A-203ENST00000371747 CTTNBP2Q8WZ74 1663 aa35.2■■■■□ 3.23
TTC39A-203ENST00000371747 APLP2Q06481 763 aa35.19■■■■□ 3.22
TTC39A-203ENST00000371747 FHAD1B1AJZ9 1412 aa35.15■■■■□ 3.22
TTC39A-203ENST00000371747 ADAMTS12P58397 1594 aa35.14■■■■□ 3.22
TTC39A-203ENST00000371747 SNAPC4Q5SXM2 1469 aa35.09■■■■□ 3.21
TTC39A-203ENST00000371747 EFCAB5A4FU69 1503 aa35.03■■■■□ 3.2
TTC39A-203ENST00000371747 MAGI1Q96QZ7 1491 aaPredicted RBP34.99■■■■□ 3.19
TTC39A-203ENST00000371747 P3H3Q8IVL6 736 aa34.95■■■■□ 3.18
TTC39A-203ENST00000371747 FHOD3Q2V2M9 1422 aa34.92■■■■□ 3.18
TTC39A-203ENST00000371747 SYNJ2O15056 1496 aa34.88■■■■□ 3.17
TTC39A-203ENST00000371747 KANK4Q5T7N3 995 aaPredicted RBP34.87■■■■□ 3.17
TTC39A-203ENST00000371747 GRIN2AQ12879 1464 aa34.87■■■■□ 3.17
TTC39A-203ENST00000371747 SAMD9Q5K651 1589 aa34.87■■■■□ 3.17
TTC39A-203ENST00000371747 CHMP7Q8WUX9 453 aaPredicted RBP34.84■■■■□ 3.17
TTC39A-203ENST00000371747 MAP3K1Q13233 1512 aa34.81■■■■□ 3.16
TTC39A-203ENST00000371747 PCF11O94913 1555 aaKnown RBP34.8■■■■□ 3.16
TTC39A-203ENST00000371747 FBLN2P98095 1184 aa34.78■■■■□ 3.16
TTC39A-203ENST00000371747 IQGAP2Q13576 1575 aa34.78■■■■□ 3.16
TTC39A-203ENST00000371747 TIAM1Q13009 1591 aa34.77■■■■□ 3.16
TTC39A-203ENST00000371747 FMN1Q68DA7 1419 aa34.74■■■■□ 3.15
TTC39A-203ENST00000371747 FYCO1Q9BQS8 1478 aa34.73■■■■□ 3.15
TTC39A-203ENST00000371747 CASKIN1Q8WXD9 1431 aa34.72■■■■□ 3.15
TTC39A-203ENST00000371747 CEP170Q5SW79 1584 aa34.68■■■■□ 3.14
TTC39A-203ENST00000371747 KIAA0586Q9BVV6 1533 aa34.68■■■■□ 3.14
TTC39A-203ENST00000371747 CFAP43Q8NDM7 1665 aa34.65■■■■□ 3.14
TTC39A-203ENST00000371747 NUP160Q12769 1436 aa34.63■■■■□ 3.13
TTC39A-203ENST00000371747 ATP1B4Q9UN42 357 aaPredicted RBP34.62■■■■□ 3.13
TTC39A-203ENST00000371747 UGGT2Q9NYU1 1516 aa34.62■■■■□ 3.13
TTC39A-203ENST00000371747 LRRC9Q6ZRR7 1453 aa34.62■■■■□ 3.13
TTC39A-203ENST00000371747 CHD1O14646 1710 aa34.58■■■■□ 3.13
TTC39A-203ENST00000371747 ZEB1P37275 1124 aaPredicted RBP34.58■■■■□ 3.13
TTC39A-203ENST00000371747 RRBP1Q9P2E9 1410 aaKnown RBP34.53■■■■□ 3.12
TTC39A-203ENST00000371747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.52■■■■□ 3.12
TTC39A-203ENST00000371747 HNRNPUL2Q1KMD3 747 aaKnown RBP34.51■■■■□ 3.12
TTC39A-203ENST00000371747 DISP1Q96F81 1524 aa34.45■■■■□ 3.1
TTC39A-203ENST00000371747 LRRIQ1Q96JM4 1722 aa34.43■■■■□ 3.1
TTC39A-203ENST00000371747 KIAA0556O60303 1618 aa34.43■■■■□ 3.1
TTC39A-203ENST00000371747 JPH4Q96JJ6 628 aa34.42■■■■□ 3.1
TTC39A-203ENST00000371747 CCER1Q8TC90 406 aaPredicted RBP34.41■■■■□ 3.1
TTC39A-203ENST00000371747 CCNB3Q8WWL7 1395 aa34.4■■■■□ 3.1
TTC39A-203ENST00000371747 PHLDB1Q86UU1 1377 aa34.35■■■■□ 3.09
TTC39A-203ENST00000371747 HECW1Q76N89 1606 aa34.33■■■■□ 3.09
TTC39A-203ENST00000371747 CCDC18Q5T9S5 1454 aa34.3■■■■□ 3.08
TTC39A-203ENST00000371747 MTUS2Q5JR59 1369 aa34.28■■■■□ 3.08
TTC39A-203ENST00000371747 EPRSP07814 1512 aaKnown RBP34.22■■■■□ 3.07
TTC39A-203ENST00000371747 CARMIL2Q6F5E8 1435 aa34.22■■■■□ 3.07
TTC39A-203ENST00000371747 EHBP1L1Q8N3D4 1523 aa34.2■■■■□ 3.06
TTC39A-203ENST00000371747 SHROOM2Q13796 1616 aa34.17■■■■□ 3.06
TTC39A-203ENST00000371747 PRG4Q92954 1404 aaPredicted RBP34.17■■■■□ 3.06
TTC39A-203ENST00000371747 CLASP1Q7Z460 1538 aa34.17■■■■□ 3.06
TTC39A-203ENST00000371747 MAGI3Q5TCQ9 1506 aa34.15■■■■□ 3.06
TTC39A-203ENST00000371747 RAPGEF6Q8TEU7 1601 aa34.14■■■■□ 3.06
TTC39A-203ENST00000371747 CDK13Q14004 1512 aaKnown RBP34.13■■■■□ 3.05
TTC39A-203ENST00000371747 SUPT6HQ7KZ85 1726 aaKnown RBP34.13■■■■□ 3.05
TTC39A-203ENST00000371747 NCOA2Q15596 1464 aa34.11■■■■□ 3.05
TTC39A-203ENST00000371747 NUP153P49790 1475 aaKnown RBP34.09■■■■□ 3.05
TTC39A-203ENST00000371747 ITGAEP38570 1179 aa34.07■■■■□ 3.05
TTC39A-203ENST00000371747 FAM50AQ14320 339 aaKnown RBP34.07■■■■□ 3.04
TTC39A-203ENST00000371747 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.06■■■■□ 3.04
TTC39A-203ENST00000371747 FGD6Q6ZV73 1430 aa34.05■■■■□ 3.04
TTC39A-203ENST00000371747 ARHGEF11O15085 1522 aa34.04■■■■□ 3.04
TTC39A-203ENST00000371747 ARID3CA6NKF2 412 aa34.03■■■■□ 3.04
TTC39A-203ENST00000371747 ERCC6L2Q5T890 1561 aa34.01■■■■□ 3.04
TTC39A-203ENST00000371747 PLB1Q6P1J6 1458 aa34.01■■■■□ 3.03
TTC39A-203ENST00000371747 MYOM3Q5VTT5 1437 aa34■■■■□ 3.03
TTC39A-203ENST00000371747 OSCARQ8IYS5 282 aa33.95■■■■□ 3.03
TTC39A-203ENST00000371747 PTPRGP23470 1445 aa33.94■■■■□ 3.02
TTC39A-203ENST00000371747 ABCA8O94911 1581 aa33.91■■■■□ 3.02
TTC39A-203ENST00000371747 CDK11AQ9UQ88 783 aaPredicted RBP33.88■■■■□ 3.01
TTC39A-203ENST00000371747 DHX57Q6P158 1386 aaKnown RBP33.85■■■■□ 3.01
TTC39A-203ENST00000371747 PTPN23Q9H3S7 1636 aa33.84■■■■□ 3.01
TTC39A-203ENST00000371747 SETD5Q9C0A6 1442 aa33.82■■■■□ 3
TTC39A-203ENST00000371747 RAB3GAP2Q9H2M9 1393 aa33.82■■■■□ 3
TTC39A-203ENST00000371747 TCOF1Q13428 1488 aaKnown RBP33.78■■■■□ 3
TTC39A-203ENST00000371747 TROQ12816 1431 aaPredicted RBP33.78■■■■□ 3
TTC39A-203ENST00000371747 MIA2Q96PC5 1412 aa33.77■■■■□ 3
TTC39A-203ENST00000371747 CLSPNQ9HAW4 1339 aa33.75■■■□□ 2.99
TTC39A-203ENST00000371747 UACAQ9BZF9 1416 aa33.74■■■□□ 2.99
TTC39A-203ENST00000371747 ATP10BO94823 1461 aa33.73■■■□□ 2.99
TTC39A-203ENST00000371747 PTPRKQ15262 1439 aa33.72■■■□□ 2.99
TTC39A-203ENST00000371747 ADCY10Q96PN6 1610 aa33.68■■■□□ 2.98
TTC39A-203ENST00000371747 PLEKHD1A6NEE1 506 aa33.63■■■□□ 2.97
TTC39A-203ENST00000371747 KIF14Q15058 1648 aa33.62■■■□□ 2.97
TTC39A-203ENST00000371747 ABCC2Q92887 1545 aa33.61■■■□□ 2.97
TTC39A-203ENST00000371747 HFM1A2PYH4 1435 aa33.59■■■□□ 2.97
TTC39A-203ENST00000371747 UHRF1BP1LA0JNW5 1464 aa33.55■■■□□ 2.96
TTC39A-203ENST00000371747 ITSN2Q9NZM3 1697 aa33.54■■■□□ 2.96
TTC39A-203ENST00000371747 GPATCH8Q9UKJ3 1502 aaKnown RBP33.53■■■□□ 2.96
TTC39A-203ENST00000371747 NAIPQ13075 1403 aa33.52■■■□□ 2.96
TTC39A-203ENST00000371747 ABCC10Q5T3U5 1492 aa33.48■■■□□ 2.95
TTC39A-203ENST00000371747 ZNF644Q9H582 1327 aaPredicted RBP33.48■■■□□ 2.95
TTC39A-203ENST00000371747 MAPKBP1O60336 1514 aa33.47■■■□□ 2.95
TTC39A-203ENST00000371747 CFDP1Q9UEE9 299 aaPredicted RBP33.46■■■□□ 2.95
TTC39A-203ENST00000371747 CHIC2Q9UKJ5 165 aa33.44■■■□□ 2.94
TTC39A-203ENST00000371747 DNMT1P26358 1616 aaKnown RBP33.44■■■□□ 2.94
TTC39A-203ENST00000371747 DAPK1P53355 1430 aa33.44■■■□□ 2.94
TTC39A-203ENST00000371747 AKNAQ7Z591 1439 aa33.44■■■□□ 2.94
TTC39A-203ENST00000371747 KDM5BQ9UGL1 1544 aa33.43■■■□□ 2.94
TTC39A-203ENST00000371747 CAMSAP2Q08AD1 1489 aa33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms