RNA–Protein interactions for RNA: ENST00000371355.8

CACNA1B-203, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1B, Length 9,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-203ENST00000371355 ARID4BQ4LE39 1312 aaPredicted RBP23.58■■□□□ 1.37
CACNA1B-203ENST00000371355 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.56■■□□□ 1.36
CACNA1B-203ENST00000371355 LAS1LQ9Y4W2 734 aaKnown RBP23.55■■□□□ 1.36
CACNA1B-203ENST00000371355 FAM9BQ8IZU0 186 aa23.54■■□□□ 1.36
CACNA1B-203ENST00000371355 SETQ01105 290 aaPredicted RBP23.53■■□□□ 1.36
CACNA1B-203ENST00000371355 USP35Q9P2H5 1018 aa23.51■■□□□ 1.35
CACNA1B-203ENST00000371355 TMC1Q8TDI8 760 aa23.49■■□□□ 1.35
CACNA1B-203ENST00000371355 KIAA2012Q0VF49 1180 aa23.47■■□□□ 1.35
CACNA1B-203ENST00000371355 MRS2Q9HD23 443 aa23.44■■□□□ 1.34
CACNA1B-203ENST00000371355 PPP4R2Q9NY27 417 aa23.44■■□□□ 1.34
CACNA1B-203ENST00000371355 A0A0U1RQG5 324 aaPredicted RBP23.43■■□□□ 1.34
CACNA1B-203ENST00000371355 GOLGA6L1Q8N7Z2 621 aa23.41■■□□□ 1.34
CACNA1B-203ENST00000371355 MIER1Q8N108 512 aa23.4■■□□□ 1.34
CACNA1B-203ENST00000371355 WDR43Q15061 677 aaKnown RBP eCLIP23.39■■□□□ 1.34
CACNA1B-203ENST00000371355 SUPT16HQ9Y5B9 1047 aaKnown RBP23.38■■□□□ 1.33
CACNA1B-203ENST00000371355 DDX10Q13206 875 aaKnown RBP23.37■■□□□ 1.33
CACNA1B-203ENST00000371355 CSRNP3Q8WYN3 585 aa23.34■■□□□ 1.33
CACNA1B-203ENST00000371355 VSIG10Q8N0Z9 540 aa23.33■■□□□ 1.33
CACNA1B-203ENST00000371355 IRX6P78412 446 aaPredicted RBP23.32■■□□□ 1.32
CACNA1B-203ENST00000371355 HSCBQ8IWL3 235 aa23.31■■□□□ 1.32
CACNA1B-203ENST00000371355 PKNOX2Q96KN3 472 aa23.31■■□□□ 1.32
CACNA1B-203ENST00000371355 GOLGA6L3A6NEY3 463 aa23.29■■□□□ 1.32
CACNA1B-203ENST00000371355 HSP90AB1P08238 724 aaKnown RBP23.28■■□□□ 1.32
CACNA1B-203ENST00000371355 GBP4Q96PP9 640 aa23.25■■□□□ 1.31
CACNA1B-203ENST00000371355 RBM19Q9Y4C8 960 aaKnown RBP23.25■■□□□ 1.31
CACNA1B-203ENST00000371355 DRC7Q8IY82 874 aa23.24■■□□□ 1.31
CACNA1B-203ENST00000371355 SYAP1Q96A49 352 aaPredicted RBP23.24■■□□□ 1.31
CACNA1B-203ENST00000371355 APPP05067 770 aa23.24■■□□□ 1.31
CACNA1B-203ENST00000371355 PODXL2Q9NZ53 605 aa23.2■■□□□ 1.3
CACNA1B-203ENST00000371355 PLCB2Q00722 1185 aa23.2■■□□□ 1.3
CACNA1B-203ENST00000371355 CHMP4BQ9H444 224 aaKnown RBP23.2■■□□□ 1.3
CACNA1B-203ENST00000371355 CFAP44Q96MT7 982 aa23.19■■□□□ 1.3
CACNA1B-203ENST00000371355 MTERF4Q7Z6M4 381 aaKnown RBP23.14■■□□□ 1.3
CACNA1B-203ENST00000371355 GOLGA6L4A6NEF3 574 aa23.14■■□□□ 1.29
CACNA1B-203ENST00000371355 NOC3LQ8WTT2 800 aaKnown RBP23.13■■□□□ 1.29
CACNA1B-203ENST00000371355 FTSJ3Q8IY81 847 aaKnown RBP23.13■■□□□ 1.29
CACNA1B-203ENST00000371355 NOM1Q5C9Z4 860 aaKnown RBP23.13■■□□□ 1.29
CACNA1B-203ENST00000371355 ARID3AQ99856 593 aa23.12■■□□□ 1.29
CACNA1B-203ENST00000371355 PHF14O94880 888 aa23.1■■□□□ 1.29
CACNA1B-203ENST00000371355 ZNF771Q7L3S4 317 aaPredicted RBP23.04■■□□□ 1.28
CACNA1B-203ENST00000371355 HTATSF1O43719 755 aaKnown RBP23.03■■□□□ 1.28
CACNA1B-203ENST00000371355 MS4A1P11836 297 aa23.03■■□□□ 1.28
CACNA1B-203ENST00000371355 PRKCSHP14314 528 aaPredicted RBP23.03■■□□□ 1.28
CACNA1B-203ENST00000371355 MAP7D2Q96T17 732 aa23.03■■□□□ 1.28
CACNA1B-203ENST00000371355 TEX35Q5T0J7 233 aa23.02■■□□□ 1.28
CACNA1B-203ENST00000371355 SALL2Q9Y467 1007 aaPredicted RBP23.01■■□□□ 1.27
CACNA1B-203ENST00000371355 GPS2Q13227 327 aa23.01■■□□□ 1.27
CACNA1B-203ENST00000371355 IPO9Q96P70 1041 aaKnown RBP23.01■■□□□ 1.27
CACNA1B-203ENST00000371355 MCCP23508 829 aa22.98■■□□□ 1.27
CACNA1B-203ENST00000371355 FBLN2P98095 1184 aa22.98■■□□□ 1.27
CACNA1B-203ENST00000371355 DDX11L8A8MPP1 907 aa22.95■■□□□ 1.26
CACNA1B-203ENST00000371355 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.94■■□□□ 1.26
CACNA1B-203ENST00000371355 ESF1Q9H501 851 aaKnown RBP22.94■■□□□ 1.26
CACNA1B-203ENST00000371355 RGS3P49796 1198 aa22.94■■□□□ 1.26
CACNA1B-203ENST00000371355 EIF4G2P78344 907 aaKnown RBP eCLIP22.92■■□□□ 1.26
CACNA1B-203ENST00000371355 CSPP1Q1MSJ5 1256 aa22.91■■□□□ 1.26
CACNA1B-203ENST00000371355 TPM4P67936 248 aa22.91■■□□□ 1.26
CACNA1B-203ENST00000371355 TAF3Q5VWG9 929 aa22.91■■□□□ 1.26
CACNA1B-203ENST00000371355 CCDC66A2RUB6 948 aa22.9■■□□□ 1.26
CACNA1B-203ENST00000371355 CWC15Q9P013 229 aaKnown RBP22.9■■□□□ 1.26
CACNA1B-203ENST00000371355 ARID3CA6NKF2 412 aa22.88■■□□□ 1.25
CACNA1B-203ENST00000371355 TCERG1O14776 1098 aaKnown RBP22.88■■□□□ 1.25
CACNA1B-203ENST00000371355 TPRNQ4KMQ1 711 aa22.87■■□□□ 1.25
CACNA1B-203ENST00000371355 ZNF777Q9ULD5 760 aaPredicted RBP22.85■■□□□ 1.25
CACNA1B-203ENST00000371355 GSE1Q14687 1217 aa22.85■■□□□ 1.25
CACNA1B-203ENST00000371355 EEA1Q15075 1411 aa22.84■■□□□ 1.25
CACNA1B-203ENST00000371355 ABCC9O60706 1549 aa22.84■■□□□ 1.25
CACNA1B-203ENST00000371355 FGD1P98174 961 aa22.82■■□□□ 1.24
CACNA1B-203ENST00000371355 CALD1Q05682 793 aaKnown RBP22.82■■□□□ 1.24
CACNA1B-203ENST00000371355 CDCA8Q53HL2 280 aa22.82■■□□□ 1.24
CACNA1B-203ENST00000371355 GZF1Q9H116 711 aaPredicted RBP22.81■■□□□ 1.24
CACNA1B-203ENST00000371355 P3H3Q8IVL6 736 aa22.81■■□□□ 1.24
CACNA1B-203ENST00000371355 B4GALNT3Q6L9W6 998 aa22.8■■□□□ 1.24
CACNA1B-203ENST00000371355 PABPN1Q86U42 306 aaKnown RBP eCLIP22.8■■□□□ 1.24
CACNA1B-203ENST00000371355 TSHZ2Q9NRE2 1034 aa22.78■■□□□ 1.24
CACNA1B-203ENST00000371355 SKOR2Q2VWA4 1001 aaPredicted RBP22.77■■□□□ 1.24
CACNA1B-203ENST00000371355 CCDC70Q6NSX1 233 aa22.77■■□□□ 1.23
CACNA1B-203ENST00000371355 CCDC34Q96HJ3 373 aa22.77■■□□□ 1.23
CACNA1B-203ENST00000371355 SCRIBQ14160 1630 aa22.76■■□□□ 1.23
CACNA1B-203ENST00000371355 CFAP53Q96M91 514 aa22.76■■□□□ 1.23
CACNA1B-203ENST00000371355 FANCIQ9NVI1 1328 aa22.75■■□□□ 1.23
CACNA1B-203ENST00000371355 RSF1Q96T23 1441 aaPredicted RBP22.74■■□□□ 1.23
CACNA1B-203ENST00000371355 CCER2I3L3R5 266 aa22.74■■□□□ 1.23
CACNA1B-203ENST00000371355 TPM2P07951 284 aa22.73■■□□□ 1.23
CACNA1B-203ENST00000371355 STAG3Q9UJ98 1225 aa22.71■■□□□ 1.23
CACNA1B-203ENST00000371355 KCNJ4P48050 445 aa22.71■■□□□ 1.23
CACNA1B-203ENST00000371355 KIF16BQ96L93 1317 aa22.7■■□□□ 1.23
CACNA1B-203ENST00000371355 TPM3P06753 285 aa22.68■■□□□ 1.22
CACNA1B-203ENST00000371355 RRP12Q5JTH9 1297 aaKnown RBP22.68■■□□□ 1.22
CACNA1B-203ENST00000371355 TIMELESSQ9UNS1 1208 aa22.67■■□□□ 1.22
CACNA1B-203ENST00000371355 FAM13BQ9NYF5 915 aa22.67■■□□□ 1.22
CACNA1B-203ENST00000371355 RRP9O43818 475 aaKnown RBP22.67■■□□□ 1.22
CACNA1B-203ENST00000371355 SLKQ9H2G2 1235 aaPredicted RBP22.66■■□□□ 1.22
CACNA1B-203ENST00000371355 RDXP35241 583 aaKnown RBP22.66■■□□□ 1.22
CACNA1B-203ENST00000371355 GNL2Q13823 731 aaKnown RBP22.65■■□□□ 1.22
CACNA1B-203ENST00000371355 FAM43AQ8N2R8 423 aa22.65■■□□□ 1.22
CACNA1B-203ENST00000371355 KNSTRNQ9Y448 316 aa22.65■■□□□ 1.22
CACNA1B-203ENST00000371355 HMMRO75330 724 aa22.63■■□□□ 1.21
CACNA1B-203ENST00000371355 ARGLU1Q9NWB6 273 aaPredicted RBP22.63■■□□□ 1.21
CACNA1B-203ENST00000371355 STK11IPQ8N1F8 1099 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms