RNA–Protein interactions for RNA: ENST00000371242.6

RAE1-201, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAE1, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-201ENST00000371242 EFCAB5A4FU69 1503 aa16.82■□□□□ 0.28
RAE1-201ENST00000371242 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
RAE1-201ENST00000371242 TDRD9Q8NDG6 1382 aaKnown RBP16.81■□□□□ 0.28
RAE1-201ENST00000371242 TIAM1Q13009 1591 aa16.81■□□□□ 0.28
RAE1-201ENST00000371242 RRBP1Q9P2E9 1410 aaKnown RBP16.8■□□□□ 0.28
RAE1-201ENST00000371242 THOC2Q8NI27 1593 aaKnown RBP16.78■□□□□ 0.28
RAE1-201ENST00000371242 WDR62O43379 1518 aa16.76■□□□□ 0.27
RAE1-201ENST00000371242 CFAP43Q8NDM7 1665 aa16.75■□□□□ 0.27
RAE1-201ENST00000371242 PCF11O94913 1555 aaKnown RBP16.74■□□□□ 0.27
RAE1-201ENST00000371242 PBRM1Q86U86 1689 aa16.73■□□□□ 0.27
RAE1-201ENST00000371242 FHOD3Q2V2M9 1422 aa16.72■□□□□ 0.27
RAE1-201ENST00000371242 AQRO60306 1485 aaKnown RBP eCLIP16.72■□□□□ 0.278e-8■■■■■ 32.1
RAE1-201ENST00000371242 LRRC9Q6ZRR7 1453 aa16.72■□□□□ 0.27
RAE1-201ENST00000371242 FYCO1Q9BQS8 1478 aa16.71■□□□□ 0.26
RAE1-201ENST00000371242 CCNB3Q8WWL7 1395 aa16.7■□□□□ 0.26
RAE1-201ENST00000371242 SAMD9Q5K651 1589 aa16.69■□□□□ 0.26
RAE1-201ENST00000371242 P3H3Q8IVL6 736 aa16.69■□□□□ 0.26
RAE1-201ENST00000371242 CASKIN1Q8WXD9 1431 aa16.68■□□□□ 0.26
RAE1-201ENST00000371242 ZNF608Q9ULD9 1512 aaPredicted RBP16.67■□□□□ 0.26
RAE1-201ENST00000371242 FMN1Q68DA7 1419 aa16.67■□□□□ 0.26
RAE1-201ENST00000371242 ADAMTS12P58397 1594 aa16.64■□□□□ 0.25
RAE1-201ENST00000371242 IFT140Q96RY7 1462 aa16.64■□□□□ 0.25
RAE1-201ENST00000371242 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
RAE1-201ENST00000371242 GRIN2BQ13224 1484 aa16.62■□□□□ 0.25
RAE1-201ENST00000371242 CLSPNQ9HAW4 1339 aa16.6■□□□□ 0.25
RAE1-201ENST00000371242 PHLDB1Q86UU1 1377 aa16.59■□□□□ 0.25
RAE1-201ENST00000371242 DHX57Q6P158 1386 aaKnown RBP16.58■□□□□ 0.24
RAE1-201ENST00000371242 ATP1B4Q9UN42 357 aaPredicted RBP16.57■□□□□ 0.24
RAE1-201ENST00000371242 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
RAE1-201ENST00000371242 LRRIQ1Q96JM4 1722 aa16.56■□□□□ 0.24
RAE1-201ENST00000371242 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
RAE1-201ENST00000371242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.51■□□□□ 0.23
RAE1-201ENST00000371242 ITGAEP38570 1179 aa16.49■□□□□ 0.23
RAE1-201ENST00000371242 UGGT2Q9NYU1 1516 aa16.48■□□□□ 0.23
RAE1-201ENST00000371242 ZNF316A6NFI3 1004 aaPredicted RBP16.48■□□□□ 0.23
RAE1-201ENST00000371242 MTUS2Q5JR59 1369 aa16.47■□□□□ 0.23
RAE1-201ENST00000371242 RAB3GAP2Q9H2M9 1393 aa16.46■□□□□ 0.23
RAE1-201ENST00000371242 DIEXFQ68CQ4 756 aaKnown RBP16.46■□□□□ 0.23
RAE1-201ENST00000371242 CCDC18Q5T9S5 1454 aa16.46■□□□□ 0.22
RAE1-201ENST00000371242 EHBP1L1Q8N3D4 1523 aa16.45■□□□□ 0.22
RAE1-201ENST00000371242 HECW1Q76N89 1606 aa16.45■□□□□ 0.22
RAE1-201ENST00000371242 SETD5Q9C0A6 1442 aa16.45■□□□□ 0.22
RAE1-201ENST00000371242 FAM50AQ14320 339 aaKnown RBP16.44■□□□□ 0.22
RAE1-201ENST00000371242 SUPT6HQ7KZ85 1726 aaKnown RBP16.44■□□□□ 0.22
RAE1-201ENST00000371242 KIAA0586Q9BVV6 1533 aa16.44■□□□□ 0.22
RAE1-201ENST00000371242 FGD6Q6ZV73 1430 aa16.44■□□□□ 0.22
RAE1-201ENST00000371242 GRIN2AQ12879 1464 aa16.44■□□□□ 0.22
RAE1-201ENST00000371242 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
RAE1-201ENST00000371242 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
RAE1-201ENST00000371242 NCOA2Q15596 1464 aa16.41■□□□□ 0.22
RAE1-201ENST00000371242 FBLN2P98095 1184 aa16.41■□□□□ 0.22
RAE1-201ENST00000371242 ARHGEF11O15085 1522 aa16.39■□□□□ 0.21
RAE1-201ENST00000371242 KIAA0556O60303 1618 aa16.39■□□□□ 0.21
RAE1-201ENST00000371242 MYOM3Q5VTT5 1437 aa16.38■□□□□ 0.21
RAE1-201ENST00000371242 EPRSP07814 1512 aaKnown RBP16.38■□□□□ 0.21
RAE1-201ENST00000371242 MAGI3Q5TCQ9 1506 aa16.38■□□□□ 0.21
RAE1-201ENST00000371242 DISP1Q96F81 1524 aa16.37■□□□□ 0.21
RAE1-201ENST00000371242 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
RAE1-201ENST00000371242 MAPKBP1O60336 1514 aa16.36■□□□□ 0.21
RAE1-201ENST00000371242 CHMP7Q8WUX9 453 aaPredicted RBP16.34■□□□□ 0.21
RAE1-201ENST00000371242 CEP170Q5SW79 1584 aa16.33■□□□□ 0.2
RAE1-201ENST00000371242 PTPN23Q9H3S7 1636 aa16.32■□□□□ 0.2
RAE1-201ENST00000371242 CDK13Q14004 1512 aaKnown RBP16.32■□□□□ 0.2
RAE1-201ENST00000371242 RAPGEF6Q8TEU7 1601 aa16.29■□□□□ 0.2
RAE1-201ENST00000371242 TCOF1Q13428 1488 aaKnown RBP16.28■□□□□ 0.2
RAE1-201ENST00000371242 HFM1A2PYH4 1435 aa16.28■□□□□ 0.2
RAE1-201ENST00000371242 NUP160Q12769 1436 aa16.28■□□□□ 0.2
RAE1-201ENST00000371242 PTPRKQ15262 1439 aa16.28■□□□□ 0.2
RAE1-201ENST00000371242 NUP153P49790 1475 aaKnown RBP16.26■□□□□ 0.19
RAE1-201ENST00000371242 MIA2Q96PC5 1412 aa16.25■□□□□ 0.19
RAE1-201ENST00000371242 NAIPQ13075 1403 aa16.22■□□□□ 0.19
RAE1-201ENST00000371242 CARMIL2Q6F5E8 1435 aa16.21■□□□□ 0.18
RAE1-201ENST00000371242 UACAQ9BZF9 1416 aa16.2■□□□□ 0.18
RAE1-201ENST00000371242 GCC2Q8IWJ2 1684 aa16.19■□□□□ 0.18
RAE1-201ENST00000371242 CHD1O14646 1710 aa16.19■□□□□ 0.18
RAE1-201ENST00000371242 JPH4Q96JJ6 628 aa16.19■□□□□ 0.18
RAE1-201ENST00000371242 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
RAE1-201ENST00000371242 AKNAQ7Z591 1439 aa16.18■□□□□ 0.18
RAE1-201ENST00000371242 ARID3CA6NKF2 412 aa16.18■□□□□ 0.18
RAE1-201ENST00000371242 CDK11AQ9UQ88 783 aaPredicted RBP16.18■□□□□ 0.18
RAE1-201ENST00000371242 PLB1Q6P1J6 1458 aa16.16■□□□□ 0.18
RAE1-201ENST00000371242 SIN3AQ96ST3 1273 aa16.15■□□□□ 0.18
RAE1-201ENST00000371242 TROQ12816 1431 aaPredicted RBP16.13■□□□□ 0.17
RAE1-201ENST00000371242 ADCY10Q96PN6 1610 aa16.13■□□□□ 0.17
RAE1-201ENST00000371242 MIER1Q8N108 512 aa16.12■□□□□ 0.17
RAE1-201ENST00000371242 DNMT1P26358 1616 aaKnown RBP16.11■□□□□ 0.17
RAE1-201ENST00000371242 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
RAE1-201ENST00000371242 ABCA8O94911 1581 aa16.11■□□□□ 0.17
RAE1-201ENST00000371242 ITSN2Q9NZM3 1697 aa16.11■□□□□ 0.17
RAE1-201ENST00000371242 PRG4Q92954 1404 aaPredicted RBP16.1■□□□□ 0.17
RAE1-201ENST00000371242 DAPK1P53355 1430 aa16.09■□□□□ 0.17
RAE1-201ENST00000371242 CENPBP07199 599 aaPredicted RBP16.08■□□□□ 0.17
RAE1-201ENST00000371242 ACIN1Q9UKV3 1341 aaKnown RBP16.08■□□□□ 0.16
RAE1-201ENST00000371242 RRP7BPQ9NSQ0 103 aa16.08■□□□□ 0.16
RAE1-201ENST00000371242 CHIC2Q9UKJ5 165 aa16.08■□□□□ 0.16
RAE1-201ENST00000371242 ROCK1Q13464 1354 aa16.07■□□□□ 0.16
RAE1-201ENST00000371242 KDM6BO15054 1643 aa16.06■□□□□ 0.16
RAE1-201ENST00000371242 KIF14Q15058 1648 aa16.06■□□□□ 0.16
RAE1-201ENST00000371242 ABCC5O15440 1437 aa16.05■□□□□ 0.16
RAE1-201ENST00000371242 PPP1R15AO75807 674 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms