RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 KIF21BO75037 1637 aa13.09□□□□□ -0.31
HMGCLL1-204ENST00000370852 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
HMGCLL1-204ENST00000370852 EEA1Q15075 1411 aa13.09□□□□□ -0.31
HMGCLL1-204ENST00000370852 PPP4R2Q9NY27 417 aa13.08□□□□□ -0.32
HMGCLL1-204ENST00000370852 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
HMGCLL1-204ENST00000370852 CEP164Q9UPV0 1460 aa13.05□□□□□ -0.32
HMGCLL1-204ENST00000370852 RAB3GAP2Q9H2M9 1393 aa13.05□□□□□ -0.32
HMGCLL1-204ENST00000370852 RTL5Q5HYW3 569 aaPredicted RBP13.04□□□□□ -0.32
HMGCLL1-204ENST00000370852 CCDC184Q52MB2 194 aa13.04□□□□□ -0.32
HMGCLL1-204ENST00000370852 EIF5BO60841 1220 aaKnown RBP13.03□□□□□ -0.32
HMGCLL1-204ENST00000370852 BRPF3Q9ULD4 1205 aa13.01□□□□□ -0.33
HMGCLL1-204ENST00000370852 SMARCA2P51531 1590 aa13.01□□□□□ -0.33
HMGCLL1-204ENST00000370852 LAS1LQ9Y4W2 734 aaKnown RBP13□□□□□ -0.33
HMGCLL1-204ENST00000370852 IPO9Q96P70 1041 aaKnown RBP13□□□□□ -0.33
HMGCLL1-204ENST00000370852 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
HMGCLL1-204ENST00000370852 RRBP1Q9P2E9 1410 aaKnown RBP12.98□□□□□ -0.33
HMGCLL1-204ENST00000370852 CUX2O14529 1486 aa12.97□□□□□ -0.33
HMGCLL1-204ENST00000370852 SENP3-EIF4A1A0A087X0R7 540 aa12.97□□□□□ -0.33
HMGCLL1-204ENST00000370852 CCNB3Q8WWL7 1395 aa12.96□□□□□ -0.33
HMGCLL1-204ENST00000370852 WASHC2AQ641Q2 1341 aa12.95□□□□□ -0.34
HMGCLL1-204ENST00000370852 NPM2Q86SE8 214 aaKnown RBP12.95□□□□□ -0.34
HMGCLL1-204ENST00000370852 TOP2AP11388 1531 aaKnown RBP12.95□□□□□ -0.34
HMGCLL1-204ENST00000370852 ARAP1Q96P48 1450 aa12.94□□□□□ -0.34
HMGCLL1-204ENST00000370852 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
HMGCLL1-204ENST00000370852 ANP32AP39687 249 aaKnown RBP12.93□□□□□ -0.34
HMGCLL1-204ENST00000370852 NEFMP07197 916 aa12.93□□□□□ -0.34
HMGCLL1-204ENST00000370852 SYNJ1O43426 1573 aa12.93□□□□□ -0.34
HMGCLL1-204ENST00000370852 FAM9BQ8IZU0 186 aa12.92□□□□□ -0.34
HMGCLL1-204ENST00000370852 AKNAQ7Z591 1439 aa12.87□□□□□ -0.35
HMGCLL1-204ENST00000370852 PKNOX2Q96KN3 472 aa12.87□□□□□ -0.35
HMGCLL1-204ENST00000370852 SETD5Q9C0A6 1442 aa12.86□□□□□ -0.35
HMGCLL1-204ENST00000370852 WASHC2CQ9Y4E1 1318 aa12.86□□□□□ -0.35
HMGCLL1-204ENST00000370852 C11orf95C9JLR9 678 aaPredicted RBP12.83□□□□□ -0.35
HMGCLL1-204ENST00000370852 FAM50AQ14320 339 aaKnown RBP12.83□□□□□ -0.35
HMGCLL1-204ENST00000370852 CNGB1Q14028 1251 aaPredicted RBP12.82□□□□□ -0.36
HMGCLL1-204ENST00000370852 SKAP1Q86WV1 359 aa12.78□□□□□ -0.36
HMGCLL1-204ENST00000370852 MRS2Q9HD23 443 aa12.78□□□□□ -0.36
HMGCLL1-204ENST00000370852 FRAT1Q92837 279 aaPredicted RBP12.77□□□□□ -0.37
HMGCLL1-204ENST00000370852 SLC4A3P48751 1232 aa12.77□□□□□ -0.37
HMGCLL1-204ENST00000370852 SMARCA4P51532 1647 aa12.76□□□□□ -0.37
HMGCLL1-204ENST00000370852 ZBED9Q6R2W3 1325 aa12.75□□□□□ -0.37
HMGCLL1-204ENST00000370852 HSPA5P11021 654 aaKnown RBP12.75□□□□□ -0.37
HMGCLL1-204ENST00000370852 GSE1Q14687 1217 aa12.75□□□□□ -0.37
HMGCLL1-204ENST00000370852 PHLDB1Q86UU1 1377 aa12.75□□□□□ -0.37
HMGCLL1-204ENST00000370852 TONSLQ96HA7 1378 aa12.75□□□□□ -0.37
HMGCLL1-204ENST00000370852 DCAF11Q8TEB1 546 aa12.73□□□□□ -0.37
HMGCLL1-204ENST00000370852 NCAPD3P42695 1498 aa12.73□□□□□ -0.37
HMGCLL1-204ENST00000370852 PRKRIP1Q9H875 184 aaPredicted RBP12.72□□□□□ -0.37
HMGCLL1-204ENST00000370852 PDE4AP27815 886 aa12.71□□□□□ -0.37
HMGCLL1-204ENST00000370852 PLEKHG5O94827 1062 aa12.71□□□□□ -0.38
HMGCLL1-204ENST00000370852 USP35Q9P2H5 1018 aa12.71□□□□□ -0.38
HMGCLL1-204ENST00000370852 PEG3Q9GZU2 1588 aa12.7□□□□□ -0.38
HMGCLL1-204ENST00000370852 NFKBIBQ15653 356 aa12.7□□□□□ -0.38
HMGCLL1-204ENST00000370852 ARHGAP35Q9NRY4 1499 aa12.69□□□□□ -0.38
HMGCLL1-204ENST00000370852 ZMYND15Q9H091 742 aa12.68□□□□□ -0.38
HMGCLL1-204ENST00000370852 VSIG10Q8N0Z9 540 aa12.68□□□□□ -0.38
HMGCLL1-204ENST00000370852 EXOC6Q8TAG9 804 aa12.67□□□□□ -0.38
HMGCLL1-204ENST00000370852 PRXQ9BXM0 1461 aa12.66□□□□□ -0.38
HMGCLL1-204ENST00000370852 KDM5BQ9UGL1 1544 aa12.66□□□□□ -0.38
HMGCLL1-204ENST00000370852 PPM1GO15355 546 aaPredicted RBP12.66□□□□□ -0.38
HMGCLL1-204ENST00000370852 BACH2Q9BYV9 841 aa12.66□□□□□ -0.38
HMGCLL1-204ENST00000370852 NUDCQ9Y266 331 aa12.65□□□□□ -0.38
HMGCLL1-204ENST00000370852 RNF123Q5XPI4 1314 aa12.65□□□□□ -0.38
HMGCLL1-204ENST00000370852 SMG6Q86US8 1419 aaKnown RBP12.65□□□□□ -0.39
HMGCLL1-204ENST00000370852 CNTLNQ9NXG0 1405 aa12.65□□□□□ -0.39
HMGCLL1-204ENST00000370852 RSPH6AQ9H0K4 717 aa12.64□□□□□ -0.39
HMGCLL1-204ENST00000370852 ATP1B4Q9UN42 357 aaPredicted RBP12.64□□□□□ -0.39
HMGCLL1-204ENST00000370852 FHAD1B1AJZ9 1412 aa12.62□□□□□ -0.39
HMGCLL1-204ENST00000370852 RRAGDQ9NQL2 400 aaPredicted RBP12.62□□□□□ -0.39
HMGCLL1-204ENST00000370852 AQRO60306 1485 aaKnown RBP eCLIP12.62□□□□□ -0.39
HMGCLL1-204ENST00000370852 FRAT2O75474 233 aaPredicted RBP12.61□□□□□ -0.39
HMGCLL1-204ENST00000370852 TIAM1Q13009 1591 aa12.61□□□□□ -0.39
HMGCLL1-204ENST00000370852 P3H3Q8IVL6 736 aa12.6□□□□□ -0.39
HMGCLL1-204ENST00000370852 NCOA2Q15596 1464 aa12.6□□□□□ -0.39
HMGCLL1-204ENST00000370852 FAM43AQ8N2R8 423 aa12.6□□□□□ -0.39
HMGCLL1-204ENST00000370852 ERICH3Q5RHP9 1530 aa12.59□□□□□ -0.39
HMGCLL1-204ENST00000370852 LRRC9Q6ZRR7 1453 aa12.59□□□□□ -0.39
HMGCLL1-204ENST00000370852 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
HMGCLL1-204ENST00000370852 EIF4G2P78344 907 aaKnown RBP eCLIP12.58□□□□□ -0.4
HMGCLL1-204ENST00000370852 CCDC7Q96M83 1385 aa12.57□□□□□ -0.4
HMGCLL1-204ENST00000370852 PTPRKQ15262 1439 aa12.55□□□□□ -0.4
HMGCLL1-204ENST00000370852 ARXQ96QS3 562 aa12.54□□□□□ -0.4
HMGCLL1-204ENST00000370852 POLR3GLQ9BT43 218 aa12.54□□□□□ -0.4
HMGCLL1-204ENST00000370852 CCDC18Q5T9S5 1454 aa12.54□□□□□ -0.4
HMGCLL1-204ENST00000370852 FOXD1Q16676 465 aa12.53□□□□□ -0.4
HMGCLL1-204ENST00000370852 PLIN1O60240 522 aa12.53□□□□□ -0.4
HMGCLL1-204ENST00000370852 RRP1P56182 461 aaKnown RBP12.52□□□□□ -0.4
HMGCLL1-204ENST00000370852 PODXL2Q9NZ53 605 aa12.52□□□□□ -0.4
HMGCLL1-204ENST00000370852 KIF7Q2M1P5 1343 aa12.52□□□□□ -0.4
HMGCLL1-204ENST00000370852 TOP2BQ02880 1626 aa12.52□□□□□ -0.41
HMGCLL1-204ENST00000370852 NCOA1Q15788 1441 aa12.51□□□□□ -0.41
HMGCLL1-204ENST00000370852 POGKQ9P215 609 aa12.51□□□□□ -0.41
HMGCLL1-204ENST00000370852 NBPF8Q3BBV2 869 aa12.5□□□□□ -0.41
HMGCLL1-204ENST00000370852 L3MBTL2Q969R5 705 aa12.5□□□□□ -0.41
HMGCLL1-204ENST00000370852 UACAQ9BZF9 1416 aa12.49□□□□□ -0.41
HMGCLL1-204ENST00000370852 NAP1L5Q96NT1 182 aaPredicted RBP12.48□□□□□ -0.41
HMGCLL1-204ENST00000370852 MS4A1P11836 297 aa12.47□□□□□ -0.41
HMGCLL1-204ENST00000370852 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
HMGCLL1-204ENST00000370852 DDRGK1Q96HY6 314 aa12.47□□□□□ -0.41
HMGCLL1-204ENST00000370852 ARID4BQ4LE39 1312 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms