RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 MTUS2Q5JR59 1369 aa10.31□□□□□ -0.76
COL21A1-203ENST00000370819 CHGAP10645 457 aaKnown RBP10.31□□□□□ -0.76
COL21A1-203ENST00000370819 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.3□□□□□ -0.76
COL21A1-203ENST00000370819 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.3□□□□□ -0.76
COL21A1-203ENST00000370819 SIN3AQ96ST3 1273 aa10.28□□□□□ -0.76
COL21A1-203ENST00000370819 WDR43Q15061 677 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL21A1-203ENST00000370819 GOLGA3Q08378 1498 aa10.26□□□□□ -0.77
COL21A1-203ENST00000370819 TNIKQ9UKE5 1360 aa10.24□□□□□ -0.77
COL21A1-203ENST00000370819 TSPY4P0CV99 314 aa10.24□□□□□ -0.77
COL21A1-203ENST00000370819 TSPY10P0CW01 314 aa10.24□□□□□ -0.77
COL21A1-203ENST00000370819 EEA1Q15075 1411 aa10.23□□□□□ -0.77
COL21A1-203ENST00000370819 GLIPR1L2Q4G1C9 344 aa10.23□□□□□ -0.77
COL21A1-203ENST00000370819 B4GALNT3Q6L9W6 998 aa10.22□□□□□ -0.77
COL21A1-203ENST00000370819 PPP4R2Q9NY27 417 aa10.21□□□□□ -0.78
COL21A1-203ENST00000370819 RTN4Q9NQC3 1192 aaKnown RBP10.2□□□□□ -0.78
COL21A1-203ENST00000370819 LAS1LQ9Y4W2 734 aaKnown RBP10.19□□□□□ -0.78
COL21A1-203ENST00000370819 RGL3Q3MIN7 710 aa10.19□□□□□ -0.78
COL21A1-203ENST00000370819 WRNQ14191 1432 aaPredicted RBP eCLIP10.18□□□□□ -0.78
COL21A1-203ENST00000370819 RBM19Q9Y4C8 960 aaKnown RBP10.18□□□□□ -0.78
COL21A1-203ENST00000370819 DDRGK1Q96HY6 314 aa10.17□□□□□ -0.78
COL21A1-203ENST00000370819 NOP58Q9Y2X3 529 aaKnown RBP10.16□□□□□ -0.78
COL21A1-203ENST00000370819 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
COL21A1-203ENST00000370819 BECN1Q14457 450 aa10.14□□□□□ -0.79
COL21A1-203ENST00000370819 CEP164Q9UPV0 1460 aa10.14□□□□□ -0.79
COL21A1-203ENST00000370819 PPM1GO15355 546 aaPredicted RBP10.13□□□□□ -0.79
COL21A1-203ENST00000370819 RGS3P49796 1198 aa10.13□□□□□ -0.79
COL21A1-203ENST00000370819 SENP3Q9H4L4 574 aaPredicted RBP10.13□□□□□ -0.79
COL21A1-203ENST00000370819 CARD11Q9BXL7 1154 aa10.12□□□□□ -0.79
COL21A1-203ENST00000370819 SOGA1O94964 1423 aa10.11□□□□□ -0.79
COL21A1-203ENST00000370819 CCNB3Q8WWL7 1395 aa10.11□□□□□ -0.79
COL21A1-203ENST00000370819 TSHZ2Q9NRE2 1034 aa10.11□□□□□ -0.79
COL21A1-203ENST00000370819 TRIM44Q96DX7 344 aaPredicted RBP10.1□□□□□ -0.79
COL21A1-203ENST00000370819 NEUROD2Q15784 382 aa10.1□□□□□ -0.79
COL21A1-203ENST00000370819 DEKP35659 375 aaKnown RBP10.1□□□□□ -0.79
COL21A1-203ENST00000370819 ESF1Q9H501 851 aaKnown RBP10.09□□□□□ -0.79
COL21A1-203ENST00000370819 KNSTRNQ9Y448 316 aa10.08□□□□□ -0.8
COL21A1-203ENST00000370819 CCER2I3L3R5 266 aa10.08□□□□□ -0.8
COL21A1-203ENST00000370819 ERICH6BQ5W0A0 696 aa10.07□□□□□ -0.8
COL21A1-203ENST00000370819 MYH16Q9H6N6 1097 aa10.07□□□□□ -0.8
COL21A1-203ENST00000370819 CFDP1Q9UEE9 299 aaPredicted RBP10.07□□□□□ -0.8
COL21A1-203ENST00000370819 KIF27Q86VH2 1401 aa10.07□□□□□ -0.8
COL21A1-203ENST00000370819 CHMP7Q8WUX9 453 aaPredicted RBP10.07□□□□□ -0.8
COL21A1-203ENST00000370819 KANK4Q5T7N3 995 aaPredicted RBP10.07□□□□□ -0.8
COL21A1-203ENST00000370819 PLPPR3Q6T4P5 718 aa10.07□□□□□ -0.8
COL21A1-203ENST00000370819 CECR2Q9BXF3 1484 aa10.06□□□□□ -0.8
COL21A1-203ENST00000370819 PLEKHD1A6NEE1 506 aa10.05□□□□□ -0.8
COL21A1-203ENST00000370819 NCLP19338 710 aaKnown RBP10.05□□□□□ -0.8
COL21A1-203ENST00000370819 KCNH8Q96L42 1107 aa10.05□□□□□ -0.8
COL21A1-203ENST00000370819 FRAT1Q92837 279 aaPredicted RBP10.05□□□□□ -0.8
COL21A1-203ENST00000370819 TIMELESSQ9UNS1 1208 aa10.04□□□□□ -0.8
COL21A1-203ENST00000370819 SMARCA4P51532 1647 aa10.04□□□□□ -0.8
COL21A1-203ENST00000370819 CC2D1BQ5T0F9 858 aaKnown RBP10.04□□□□□ -0.8
COL21A1-203ENST00000370819 BAZ1AQ9NRL2 1556 aaPredicted RBP10.04□□□□□ -0.8
COL21A1-203ENST00000370819 GOLGA6L22H0YM25 854 aa10.04□□□□□ -0.8
COL21A1-203ENST00000370819 NPM1P06748 294 aaKnown RBP eCLIP10.04□□□□□ -0.8
COL21A1-203ENST00000370819 HSPA5P11021 654 aaKnown RBP10.03□□□□□ -0.8
COL21A1-203ENST00000370819 PEG3Q9GZU2 1588 aa10.03□□□□□ -0.8
COL21A1-203ENST00000370819 FTSJ3Q8IY81 847 aaKnown RBP10.02□□□□□ -0.81
COL21A1-203ENST00000370819 NAP1L5Q96NT1 182 aaPredicted RBP10.02□□□□□ -0.81
COL21A1-203ENST00000370819 VPS8Q8N3P4 1428 aa10.02□□□□□ -0.81
COL21A1-203ENST00000370819 TNNT2P45379 298 aaPredicted RBP10.01□□□□□ -0.81
COL21A1-203ENST00000370819 CFAP53Q96M91 514 aa10.01□□□□□ -0.81
COL21A1-203ENST00000370819 CDCA8Q53HL2 280 aa10.01□□□□□ -0.81
COL21A1-203ENST00000370819 EIF4G1Q04637 1599 aaKnown RBP10□□□□□ -0.81
COL21A1-203ENST00000370819 SETD5Q9C0A6 1442 aa10□□□□□ -0.81
COL21A1-203ENST00000370819 FOXD1Q16676 465 aa10□□□□□ -0.81
COL21A1-203ENST00000370819 TPRNQ4KMQ1 711 aa10□□□□□ -0.81
COL21A1-203ENST00000370819 DCAF11Q8TEB1 546 aa9.99□□□□□ -0.81
COL21A1-203ENST00000370819 MROH2BQ7Z745 1585 aa9.98□□□□□ -0.81
COL21A1-203ENST00000370819 PTMAP06454 111 aaKnown RBP9.98□□□□□ -0.81
COL21A1-203ENST00000370819 RAB3GAP2Q9H2M9 1393 aa9.98□□□□□ -0.81
COL21A1-203ENST00000370819 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.98□□□□□ -0.81
COL21A1-203ENST00000370819 BAZ1BQ9UIG0 1483 aaKnown RBP9.98□□□□□ -0.81
COL21A1-203ENST00000370819 PPP1R15AO75807 674 aaPredicted RBP9.97□□□□□ -0.81
COL21A1-203ENST00000370819 CCDC88BA6NC98 1476 aa9.97□□□□□ -0.81
COL21A1-203ENST00000370819 PLEKHG5O94827 1062 aa9.97□□□□□ -0.81
COL21A1-203ENST00000370819 DNTTIP2Q5QJE6 756 aaKnown RBP9.96□□□□□ -0.82
COL21A1-203ENST00000370819 SPRYD3Q8NCJ5 442 aa9.95□□□□□ -0.82
COL21A1-203ENST00000370819 FHAD1B1AJZ9 1412 aa9.95□□□□□ -0.82
COL21A1-203ENST00000370819 ABCC8Q09428 1581 aa9.94□□□□□ -0.82
COL21A1-203ENST00000370819 CARMIL1Q5VZK9 1371 aa9.94□□□□□ -0.82
COL21A1-203ENST00000370819 MAPK8IP3Q9UPT6 1336 aa9.94□□□□□ -0.82
COL21A1-203ENST00000370819 RCAN3Q9UKA8 241 aa9.93□□□□□ -0.82
COL21A1-203ENST00000370819 U2SURPO15042 1029 aaKnown RBP9.93□□□□□ -0.82
COL21A1-203ENST00000370819 HSP90AB1P08238 724 aaKnown RBP9.93□□□□□ -0.82
COL21A1-203ENST00000370819 TMF1P82094 1093 aa9.92□□□□□ -0.82
COL21A1-203ENST00000370819 PLCB2Q00722 1185 aa9.92□□□□□ -0.82
COL21A1-203ENST00000370819 NUDCQ9Y266 331 aa9.91□□□□□ -0.82
COL21A1-203ENST00000370819 ZBTB7CA1YPR0 619 aa9.91□□□□□ -0.82
COL21A1-203ENST00000370819 PKD2Q13563 968 aa9.91□□□□□ -0.82
COL21A1-203ENST00000370819 SLKQ9H2G2 1235 aaPredicted RBP9.91□□□□□ -0.82
COL21A1-203ENST00000370819 WIZO95785 1651 aa9.9□□□□□ -0.82
COL21A1-203ENST00000370819 C14orf37Q86TY3 774 aa9.9□□□□□ -0.82
COL21A1-203ENST00000370819 CUX2O14529 1486 aa9.9□□□□□ -0.82
COL21A1-203ENST00000370819 TCERG1O14776 1098 aaKnown RBP9.9□□□□□ -0.82
COL21A1-203ENST00000370819 IPO9Q96P70 1041 aaKnown RBP9.9□□□□□ -0.83
COL21A1-203ENST00000370819 ARID4BQ4LE39 1312 aaPredicted RBP9.9□□□□□ -0.83
COL21A1-203ENST00000370819 CASC1Q6TDU7 716 aa9.89□□□□□ -0.83
COL21A1-203ENST00000370819 L3MBTL2Q969R5 705 aa9.89□□□□□ -0.83
COL21A1-203ENST00000370819 SMARCA2P51531 1590 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms