RNA–Protein interactions for RNA: ENST00000369660.8

UBL4A-202, Transcript of ubiquitin like 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL4A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-202ENST00000369660 VPS8Q8N3P4 1428 aa29.9■■■□□ 2.38
UBL4A-202ENST00000369660 SNAPC4Q5SXM2 1469 aa29.86■■■□□ 2.37
UBL4A-202ENST00000369660 FHAD1B1AJZ9 1412 aa29.85■■■□□ 2.37
UBL4A-202ENST00000369660 ADAMTS12P58397 1594 aa29.83■■■□□ 2.37
UBL4A-202ENST00000369660 FBLN2P98095 1184 aa29.82■■■□□ 2.36
UBL4A-202ENST00000369660 CTTNBP2Q8WZ74 1663 aa29.8■■■□□ 2.36
UBL4A-202ENST00000369660 APLP2Q06481 763 aa29.75■■■□□ 2.35
UBL4A-202ENST00000369660 CHMP7Q8WUX9 453 aaPredicted RBP29.71■■■□□ 2.35
UBL4A-202ENST00000369660 FHOD3Q2V2M9 1422 aa29.71■■■□□ 2.35
UBL4A-202ENST00000369660 ATP1B4Q9UN42 357 aaPredicted RBP29.66■■■□□ 2.34
UBL4A-202ENST00000369660 GRIN2AQ12879 1464 aa29.62■■■□□ 2.33
UBL4A-202ENST00000369660 MAGI1Q96QZ7 1491 aaPredicted RBP29.62■■■□□ 2.33
UBL4A-202ENST00000369660 KANK4Q5T7N3 995 aaPredicted RBP29.58■■■□□ 2.33
UBL4A-202ENST00000369660 SYNJ2O15056 1496 aa29.57■■■□□ 2.32
UBL4A-202ENST00000369660 IQGAP2Q13576 1575 aa29.54■■■□□ 2.32
UBL4A-202ENST00000369660 EFCAB5A4FU69 1503 aa29.53■■■□□ 2.32
UBL4A-202ENST00000369660 PCF11O94913 1555 aaKnown RBP29.47■■■□□ 2.31
UBL4A-202ENST00000369660 SAMD9Q5K651 1589 aa29.47■■■□□ 2.31
UBL4A-202ENST00000369660 CEP170Q5SW79 1584 aa29.47■■■□□ 2.31
UBL4A-202ENST00000369660 KIAA0586Q9BVV6 1533 aa29.43■■■□□ 2.3
UBL4A-202ENST00000369660 FMN1Q68DA7 1419 aa29.36■■■□□ 2.29
UBL4A-202ENST00000369660 ARID3CA6NKF2 412 aa29.35■■■□□ 2.29
UBL4A-202ENST00000369660 NUP160Q12769 1436 aa29.32■■■□□ 2.28
UBL4A-202ENST00000369660 CHD1O14646 1710 aa29.32■■■□□ 2.28
UBL4A-202ENST00000369660 UGGT2Q9NYU1 1516 aa29.32■■■□□ 2.28
UBL4A-202ENST00000369660 TIAM1Q13009 1591 aa29.31■■■□□ 2.28
UBL4A-202ENST00000369660 CASKIN1Q8WXD9 1431 aa29.31■■■□□ 2.28
UBL4A-202ENST00000369660 JPH4Q96JJ6 628 aa29.31■■■□□ 2.28
UBL4A-202ENST00000369660 DISP1Q96F81 1524 aa29.29■■■□□ 2.28
UBL4A-202ENST00000369660 FYCO1Q9BQS8 1478 aa29.29■■■□□ 2.28
UBL4A-202ENST00000369660 HNRNPUL2Q1KMD3 747 aaKnown RBP29.24■■■□□ 2.27
UBL4A-202ENST00000369660 KIAA0556O60303 1618 aa29.24■■■□□ 2.27
UBL4A-202ENST00000369660 LRRC9Q6ZRR7 1453 aa29.21■■■□□ 2.27
UBL4A-202ENST00000369660 LRRIQ1Q96JM4 1722 aa29.2■■■□□ 2.27
UBL4A-202ENST00000369660 CFAP43Q8NDM7 1665 aa29.17■■■□□ 2.26
UBL4A-202ENST00000369660 HRCP23327 699 aa29.17■■■□□ 2.26
UBL4A-202ENST00000369660 MAP3K1Q13233 1512 aa29.15■■■□□ 2.26
UBL4A-202ENST00000369660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.11■■■□□ 2.25
UBL4A-202ENST00000369660 CARMIL2Q6F5E8 1435 aa29.09■■■□□ 2.25
UBL4A-202ENST00000369660 PRG4Q92954 1404 aaPredicted RBP29.08■■■□□ 2.25
UBL4A-202ENST00000369660 MTUS2Q5JR59 1369 aa29.08■■■□□ 2.25
UBL4A-202ENST00000369660 PHLDB1Q86UU1 1377 aa29.07■■■□□ 2.24
UBL4A-202ENST00000369660 CDK13Q14004 1512 aaKnown RBP29.07■■■□□ 2.24
UBL4A-202ENST00000369660 ITGAEP38570 1179 aa29.06■■■□□ 2.24
UBL4A-202ENST00000369660 PLB1Q6P1J6 1458 aa29.04■■■□□ 2.24
UBL4A-202ENST00000369660 HECW1Q76N89 1606 aa29.03■■■□□ 2.24
UBL4A-202ENST00000369660 EPRSP07814 1512 aaKnown RBP29.02■■■□□ 2.24
UBL4A-202ENST00000369660 MAGI3Q5TCQ9 1506 aa28.99■■■□□ 2.23
UBL4A-202ENST00000369660 CCNB3Q8WWL7 1395 aa28.98■■■□□ 2.23
UBL4A-202ENST00000369660 RAPGEF6Q8TEU7 1601 aa28.97■■■□□ 2.23
UBL4A-202ENST00000369660 NUP153P49790 1475 aaKnown RBP28.97■■■□□ 2.23
UBL4A-202ENST00000369660 RRBP1Q9P2E9 1410 aaKnown RBP28.96■■■□□ 2.23
UBL4A-202ENST00000369660 FAM50AQ14320 339 aaKnown RBP28.96■■■□□ 2.23
UBL4A-202ENST00000369660 ERCC6L2Q5T890 1561 aa28.96■■■□□ 2.23
UBL4A-202ENST00000369660 CCDC18Q5T9S5 1454 aa28.94■■■□□ 2.22
UBL4A-202ENST00000369660 CCER1Q8TC90 406 aaPredicted RBP28.91■■■□□ 2.22
UBL4A-202ENST00000369660 PTPRGP23470 1445 aa28.89■■■□□ 2.21
UBL4A-202ENST00000369660 NCOA2Q15596 1464 aa28.86■■■□□ 2.21
UBL4A-202ENST00000369660 SHROOM2Q13796 1616 aa28.86■■■□□ 2.21
UBL4A-202ENST00000369660 CLASP1Q7Z460 1538 aa28.85■■■□□ 2.21
UBL4A-202ENST00000369660 EHBP1L1Q8N3D4 1523 aa28.85■■■□□ 2.21
UBL4A-202ENST00000369660 SUPT6HQ7KZ85 1726 aaKnown RBP28.81■■■□□ 2.2
UBL4A-202ENST00000369660 ABCA8O94911 1581 aa28.77■■■□□ 2.2
UBL4A-202ENST00000369660 FGD6Q6ZV73 1430 aa28.75■■■□□ 2.19
UBL4A-202ENST00000369660 CDK11AQ9UQ88 783 aaPredicted RBP28.74■■■□□ 2.19
UBL4A-202ENST00000369660 OSCARQ8IYS5 282 aa28.73■■■□□ 2.19
UBL4A-202ENST00000369660 MYOM3Q5VTT5 1437 aa28.71■■■□□ 2.19
UBL4A-202ENST00000369660 ATP10BO94823 1461 aa28.71■■■□□ 2.19
UBL4A-202ENST00000369660 UACAQ9BZF9 1416 aa28.67■■■□□ 2.18
UBL4A-202ENST00000369660 ARHGEF11O15085 1522 aa28.66■■■□□ 2.18
UBL4A-202ENST00000369660 PLEKHD1A6NEE1 506 aa28.64■■■□□ 2.18
UBL4A-202ENST00000369660 TROQ12816 1431 aaPredicted RBP28.63■■■□□ 2.17
UBL4A-202ENST00000369660 KIF14Q15058 1648 aa28.61■■■□□ 2.17
UBL4A-202ENST00000369660 ZEB1P37275 1124 aaPredicted RBP28.59■■■□□ 2.17
UBL4A-202ENST00000369660 PTPN23Q9H3S7 1636 aa28.58■■■□□ 2.17
UBL4A-202ENST00000369660 ZNF644Q9H582 1327 aaPredicted RBP28.57■■■□□ 2.16
UBL4A-202ENST00000369660 PTPRKQ15262 1439 aa28.54■■■□□ 2.16
UBL4A-202ENST00000369660 CHIC2Q9UKJ5 165 aa28.54■■■□□ 2.16
UBL4A-202ENST00000369660 ZNF777Q9ULD5 760 aaPredicted RBP28.53■■■□□ 2.16
UBL4A-202ENST00000369660 ABCC2Q92887 1545 aa28.52■■■□□ 2.16
UBL4A-202ENST00000369660 RAB3GAP2Q9H2M9 1393 aa28.51■■■□□ 2.16
UBL4A-202ENST00000369660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.5■■■□□ 2.15
UBL4A-202ENST00000369660 KCNH8Q96L42 1107 aa28.49■■■□□ 2.15
UBL4A-202ENST00000369660 CFDP1Q9UEE9 299 aaPredicted RBP28.48■■■□□ 2.15
UBL4A-202ENST00000369660 SETD5Q9C0A6 1442 aa28.45■■■□□ 2.14
UBL4A-202ENST00000369660 MIA2Q96PC5 1412 aa28.44■■■□□ 2.14
UBL4A-202ENST00000369660 GPATCH8Q9UKJ3 1502 aaKnown RBP28.43■■■□□ 2.14
UBL4A-202ENST00000369660 RRP7BPQ9NSQ0 103 aa28.42■■■□□ 2.14
UBL4A-202ENST00000369660 ADCY10Q96PN6 1610 aa28.42■■■□□ 2.14
UBL4A-202ENST00000369660 TCOF1Q13428 1488 aaKnown RBP28.41■■■□□ 2.14
UBL4A-202ENST00000369660 DHX57Q6P158 1386 aaKnown RBP28.41■■■□□ 2.14
UBL4A-202ENST00000369660 ZCCHC11Q5TAX3 1644 aaKnown RBP28.39■■■□□ 2.14
UBL4A-202ENST00000369660 ABCC10Q5T3U5 1492 aa28.36■■■□□ 2.13
UBL4A-202ENST00000369660 CDC42BPAQ5VT25 1732 aa28.34■■■□□ 2.13
UBL4A-202ENST00000369660 UHRF1BP1LA0JNW5 1464 aa28.33■■■□□ 2.13
UBL4A-202ENST00000369660 CAMSAP2Q08AD1 1489 aa28.33■■■□□ 2.13
UBL4A-202ENST00000369660 ITSN2Q9NZM3 1697 aa28.32■■■□□ 2.12
UBL4A-202ENST00000369660 KDM5BQ9UGL1 1544 aa28.32■■■□□ 2.12
UBL4A-202ENST00000369660 DAPK1P53355 1430 aa28.28■■■□□ 2.12
UBL4A-202ENST00000369660 TTC37Q6PGP7 1564 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms